Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186474980

Identifier: 186474980

GI number: 186474980

Start: 233954

End: 234598

Strand: Direct

Name: 186474980

Synonym: Bphy_0211

Alternate gene names: NA

Gene position: 233954-234598 (Clockwise)

Preceding gene: 186474979

Following gene: 186474981

Centisome position: 6.72

GC content: 65.12

Gene sequence:

>645_bases
ATGAACGTACACACGAAGAAATATCTGATCGACGGCCCGGTGGGCAAGATCGAAGTCGCCGTCGACGCGCCCGACGCCAG
CCGCGACGGCGGCGCCGCACCGCGCGGCATCGCGCTCGTTGCGCACCCGCATCCGCTGTTCGGCGGCACGATGGACAACA
AGGTCGCGCAGACGCTCGCGCGCACGCTGGTCGGGCTGAACTACATCACGTATCGCACGAATTTCCGCGGTGTCGGCGAA
ACGCAGGGCACGCACGATGCAGGCGTCGGCGAACGCGACGACTTGCGCGCCGTGATCGACCACATGCGCGCGCAACCTGA
CCAGGCCGATCTGCCGCTCGTGCTCGCGGGTTTTTCGTTCGGCACGTTCGTGCTGTCCCATGTCGCCGCACGGCTGCGCG
AAGAAGGGCAGGAAATCGAACGGATGGTGTTTGTCGGCACGGCAGCGAGCCGCTGGGAGGTCGCGCCCGTACCGGACAAC
ACGCTGGTGATCCACGGCGAAACCGATGACACCGTGCCCATTCAGTCGGTGTTCGACTGGGCGCAGCCGCAGGAATTGCC
CGTGGTCGTGATTCCCGGCGCCGAGCATTTCCTGCATCGCAAGCTGCATATTCTCAAGCGCATCATCGTCGACGCATGGC
GCTGA

Upstream 100 bases:

>100_bases
AAGACCGATATTGACGAAATCGTCGAATCGCATCTTGCGAACGGCAAGATCGTCGAGCGTCTGCTGATCGACCGCTAACC
GCGTCACCTGTCCACACAAG

Downstream 100 bases:

>100_bases
TTACGCGTTGCTGACGCCTCGTGAAAATGCGCGGCCGCGCGCCGCTCGTGTTGCAAAAAACCCGCGAAAAACGCGCGGAA
ACTCAATGACGTAGGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNVHTKKYLIDGPVGKIEVAVDAPDASRDGGAAPRGIALVAHPHPLFGGTMDNKVAQTLARTLVGLNYITYRTNFRGVGE
TQGTHDAGVGERDDLRAVIDHMRAQPDQADLPLVLAGFSFGTFVLSHVAARLREEGQEIERMVFVGTAASRWEVAPVPDN
TLVIHGETDDTVPIQSVFDWAQPQELPVVVIPGAEHFLHRKLHILKRIIVDAWR

Sequences:

>Translated_214_residues
MNVHTKKYLIDGPVGKIEVAVDAPDASRDGGAAPRGIALVAHPHPLFGGTMDNKVAQTLARTLVGLNYITYRTNFRGVGE
TQGTHDAGVGERDDLRAVIDHMRAQPDQADLPLVLAGFSFGTFVLSHVAARLREEGQEIERMVFVGTAASRWEVAPVPDN
TLVIHGETDDTVPIQSVFDWAQPQELPVVVIPGAEHFLHRKLHILKRIIVDAWR
>Mature_214_residues
MNVHTKKYLIDGPVGKIEVAVDAPDASRDGGAAPRGIALVAHPHPLFGGTMDNKVAQTLARTLVGLNYITYRTNFRGVGE
TQGTHDAGVGERDDLRAVIDHMRAQPDQADLPLVLAGFSFGTFVLSHVAARLREEGQEIERMVFVGTAASRWEVAPVPDN
TLVIHGETDDTVPIQSVFDWAQPQELPVVVIPGAEHFLHRKLHILKRIIVDAWR

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 23430; Mature: 23430

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVHTKKYLIDGPVGKIEVAVDAPDASRDGGAAPRGIALVAHPHPLFGGTMDNKVAQTLA
CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
RTLVGLNYITYRTNFRGVGETQGTHDAGVGERDDLRAVIDHMRAQPDQADLPLVLAGFSF
HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCH
GTFVLSHVAARLREEGQEIERMVFVGTAASRWEVAPVPDNTLVIHGETDDTVPIQSVFDW
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHHHCC
AQPQELPVVVIPGAEHFLHRKLHILKRIIVDAWR
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVHTKKYLIDGPVGKIEVAVDAPDASRDGGAAPRGIALVAHPHPLFGGTMDNKVAQTLA
CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
RTLVGLNYITYRTNFRGVGETQGTHDAGVGERDDLRAVIDHMRAQPDQADLPLVLAGFSF
HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCH
GTFVLSHVAARLREEGQEIERMVFVGTAASRWEVAPVPDNTLVIHGETDDTVPIQSVFDW
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHHHCC
AQPQELPVVVIPGAEHFLHRKLHILKRIIVDAWR
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]