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The map label for this gene is 186474979

Identifier: 186474979

GI number: 186474979

Start: 233608

End: 233931

Strand: Direct

Name: 186474979

Synonym: Bphy_0210

Alternate gene names: NA

Gene position: 233608-233931 (Clockwise)

Preceding gene: 186474978

Following gene: 186474980

Centisome position: 6.71

GC content: 58.02

Gene sequence:

>324_bases
ATGGATTCCTTCTTCAAGCATCACGTGTTTTTCTGTCTGAACCAGCGCGAGCCGGGCGCGTCGCGTCCCAGCTGTGCGAA
CTGCAATGCGCAGGAGATGCAGGAATACGCGAAGAAACGCGTGAAGCAGTTGGGCCTCGCCGGTCCCGGTCAGGTGCGCA
TCAACAAGGCGGGTTGCCTCGACCGCTGCGAAGAGGGCCCGACCATCGTCGTCTATCCGGAAGGCGTCTGGTACACGTAT
ATCGACAAGACCGATATTGACGAAATCGTCGAATCGCATCTTGCGAACGGCAAGATCGTCGAGCGTCTGCTGATCGACCG
CTAA

Upstream 100 bases:

>100_bases
CGATCCCGGTCGTTATAATCGACGGGCCCTCTCATTCCTGCTTTCGGCGGGCCGCGTGATGCATCCAGAGCGCCTCGCTA
TATCTCACACGTCAGCCATC

Downstream 100 bases:

>100_bases
CCGCGTCACCTGTCCACACAAGATGAACGTACACACGAAGAAATATCTGATCGACGGCCCGGTGGGCAAGATCGAAGTCG
CCGTCGACGCGCCCGACGCC

Product: putative ferredoxin

Products: NA

Alternate protein names: 2FeCpFd [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDSFFKHHVFFCLNQREPGASRPSCANCNAQEMQEYAKKRVKQLGLAGPGQVRINKAGCLDRCEEGPTIVVYPEGVWYTY
IDKTDIDEIVESHLANGKIVERLLIDR

Sequences:

>Translated_107_residues
MDSFFKHHVFFCLNQREPGASRPSCANCNAQEMQEYAKKRVKQLGLAGPGQVRINKAGCLDRCEEGPTIVVYPEGVWYTY
IDKTDIDEIVESHLANGKIVERLLIDR
>Mature_107_residues
MDSFFKHHVFFCLNQREPGASRPSCANCNAQEMQEYAKKRVKQLGLAGPGQVRINKAGCLDRCEEGPTIVVYPEGVWYTY
IDKTDIDEIVESHLANGKIVERLLIDR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12158; Mature: 12158

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFFKHHVFFCLNQREPGASRPSCANCNAQEMQEYAKKRVKQLGLAGPGQVRINKAGCL
CCCCHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH
DRCEEGPTIVVYPEGVWYTYIDKTDIDEIVESHLANGKIVERLLIDR
HHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MDSFFKHHVFFCLNQREPGASRPSCANCNAQEMQEYAKKRVKQLGLAGPGQVRINKAGCL
CCCCHHEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH
DRCEEGPTIVVYPEGVWYTYIDKTDIDEIVESHLANGKIVERLLIDR
HHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3790505; 7916603; 8334159; 8392833 [H]