| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474977
Identifier: 186474977
GI number: 186474977
Start: 231645
End: 232271
Strand: Direct
Name: 186474977
Synonym: Bphy_0208
Alternate gene names: NA
Gene position: 231645-232271 (Clockwise)
Preceding gene: 186474976
Following gene: 186474978
Centisome position: 6.66
GC content: 70.18
Gene sequence:
>627_bases ATGTCACGCTCGATCAACCGACTCTTCACCTCGCGCGCCGCGCTCGCTGCCGTGCTGGTCGCGCTCGGCGCACTGGCGGG CTGCGTGGGCAATCCGGCCGCGATCTCCGATTATCGCTATGACCTCGGCCCGGCGCCGACGCCCGGCAGCACGGGCACGA TGCCGGCCATCAAGGTGCTCGACGTCACGGCGCCCGCCACGCTCAATACCGACAAGCTGGTCTATCGTCTCCCGTATGCC GACGCGCAGCAGACGGCCGCCTACGCGAACAGCCACTGGACGATGCCGCCGGCGCAACTGCTGACGCAGCGTCTGCGCAA CGCGCTGTCGTCGCGCGGCACCGTGCTCACCGGTTCCGACGGCGTAAGCGCGCCCGTGCTCAAGGTGGACCTCGACGTAT TCGAGCAGGACTTCGACGGCCAGTCGCAGAGCCATGCCTCGGTTACCGCGCGTGCCACACTGCTCGTTGGCGGCAAGGTG GCGGGGCAGCGCACGTTCATCGCGCGCGCGCCCGCCAGTTCGGCCGATGCGGCAGGCGGCGCGCGTGCGCTCGCCGCCGC CAGCGACGAACTCGTCGCGCAGATTTCCGCATGGCTCGGCGTGCAGCCGCTCGTCGCGCAGCAATGA
Upstream 100 bases:
>100_bases CGTGCTGTTCGGCGCGCCGCACGCGGCACCCGGTCCCGGGGAGCCGGGCTTCGTGTGGCCGGCAGGCCACGCGGCCAAAT GAATTTAAAGGAACTACAGC
Downstream 100 bases:
>100_bases CGGGTTGCCGCGCAGTCACGGAGGCGCTGCATGGCTGACAAGCCGTGGCAGCGTCGTCCGTCGGCGTTCGCGAGGCAGGC GCTGGTGCTGTACGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Transport System Auxiliary Component-Like Protein; Transcriptional Regulator; ABC-Type Transporter Auxiliary Component; ABC-Type Transport System Auxiliary Component; Exported Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSRSINRLFTSRAALAAVLVALGALAGCVGNPAAISDYRYDLGPAPTPGSTGTMPAIKVLDVTAPATLNTDKLVYRLPYA DAQQTAAYANSHWTMPPAQLLTQRLRNALSSRGTVLTGSDGVSAPVLKVDLDVFEQDFDGQSQSHASVTARATLLVGGKV AGQRTFIARAPASSADAAGGARALAAASDELVAQISAWLGVQPLVAQQ
Sequences:
>Translated_208_residues MSRSINRLFTSRAALAAVLVALGALAGCVGNPAAISDYRYDLGPAPTPGSTGTMPAIKVLDVTAPATLNTDKLVYRLPYA DAQQTAAYANSHWTMPPAQLLTQRLRNALSSRGTVLTGSDGVSAPVLKVDLDVFEQDFDGQSQSHASVTARATLLVGGKV AGQRTFIARAPASSADAAGGARALAAASDELVAQISAWLGVQPLVAQQ >Mature_207_residues SRSINRLFTSRAALAAVLVALGALAGCVGNPAAISDYRYDLGPAPTPGSTGTMPAIKVLDVTAPATLNTDKLVYRLPYAD AQQTAAYANSHWTMPPAQLLTQRLRNALSSRGTVLTGSDGVSAPVLKVDLDVFEQDFDGQSQSHASVTARATLLVGGKVA GQRTFIARAPASSADAAGGARALAAASDELVAQISAWLGVQPLVAQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21401; Mature: 21270
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSINRLFTSRAALAAVLVALGALAGCVGNPAAISDYRYDLGPAPTPGSTGTMPAIKVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE DVTAPATLNTDKLVYRLPYADAQQTAAYANSHWTMPPAQLLTQRLRNALSSRGTVLTGSD EECCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCC GVSAPVLKVDLDVFEQDFDGQSQSHASVTARATLLVGGKVAGQRTFIARAPASSADAAGG CCCCCEEEEEHHHHHHCCCCCCCCCHHHEEEEEEEECCCCCCCEEEEEECCCCCCCCCCC ARALAAASDELVAQISAWLGVQPLVAQQ HHHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure SRSINRLFTSRAALAAVLVALGALAGCVGNPAAISDYRYDLGPAPTPGSTGTMPAIKVL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE DVTAPATLNTDKLVYRLPYADAQQTAAYANSHWTMPPAQLLTQRLRNALSSRGTVLTGSD EECCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCC GVSAPVLKVDLDVFEQDFDGQSQSHASVTARATLLVGGKVAGQRTFIARAPASSADAAGG CCCCCEEEEEHHHHHHCCCCCCCCCHHHEEEEEEEECCCCCCCEEEEEECCCCCCCCCCC ARALAAASDELVAQISAWLGVQPLVAQQ HHHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA