| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474976
Identifier: 186474976
GI number: 186474976
Start: 230664
End: 231626
Strand: Direct
Name: 186474976
Synonym: Bphy_0207
Alternate gene names: NA
Gene position: 230664-231626 (Clockwise)
Preceding gene: 186474975
Following gene: 186474977
Centisome position: 6.63
GC content: 65.73
Gene sequence:
>963_bases ATGGAAAATAAATCACATGCCTTCTGGGCCGGGCTCTTCACCGTCGTGATGGTGGCGGCGATTGCCGCGGCGGCGTTTCT GTTCAACGTGGACCGGTCGGTCCGCATCCCTTTCGATCTGATTGCGCGCACCAATGTCACAGGTTTGTACCCGGATGCTG CGGTACGATATCGCGGCCTCGATGTCGGCAAGGTGCAGTCGATCAAATTCGACCGCGAACATCCGGGGCAGATTCTGATC CGCATTCTCGTCGACAAAAACGCGCCGATCACACATTCGACCTTCGGCAGTCTAGGTTTGCAGGGCGTCACGGGTCTCGC GTTCATCCAGCTCGACGACACGGGGCGCGATACGACGCCGCTCGCGTCGTCGGCGAAAAGCGTCGCGCAACTGCCCATGC GCCCCGGCCTGCTCGACCAGTTGCAGGCGCGCGGCGACATCCTGATCCGGCAGTTGGAAAAGACCGTCCGCGACGTCGAC GCGTTGCTCTCGCCGGAAATGCGCGACCAGTTGCTGGCGACGGCGGCGAGCCTGCAGCATGCCGCCGATGGCGTCACGAC ACTCACGGCACAGATGGGCCCCGCCGTCGGCAAGCTGCCGGACACGCTTACTGCGCTGGACCAGACGCTCGCGTCGACGA ACCGGATGATCACCAACCTGAATCGTCCGGACGGTCCGCTCGAAGGCACGTTGAACAAGGTCGGCACGGCCGCGCAGCAG GCGGGCGACGCGCTGACGGCGATGAACGCGACGCTGCAGGACATCTCGGCGCGCGTCGGTTACGACACGCTGCCGCGCGT GAACTCGCTGGCGGACGACGTGCGTTCGGCCGTGCGTTCCGTCGACCGCGCCGCCGAGACGTTCAGCGAAACACCGAACA GCGTGCTGTTCGGCGCGCCGCACGCGGCACCCGGTCCCGGGGAGCCGGGCTTCGTGTGGCCGGCAGGCCACGCGGCCAAA TGA
Upstream 100 bases:
>100_bases GGGTGCGATGCGGCATGCATGGGCGATGCGGGCTGCATCGTCAGCCGATTGAGTCGATTGAGTCGATTGAGTCGACACCC CGCGAACAGGGAACCTGACG
Downstream 100 bases:
>100_bases ATTTAAAGGAACTACAGCATGTCACGCTCGATCAACCGACTCTTCACCTCGCGCGCCGCGCTCGCTGCCGTGCTGGTCGC GCTCGGCGCACTGGCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Related Protein; ABC-Type Transporter Periplasmic Component; ABC Membrane Transporter Periplasmic Protein; Mce Related Family; Mce Family Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transport System Periplasmic Component LinM; ABC Transporter Permease; Signal Peptide Protein; ABC-Type Transport System Protein; Periplasmic Protein; Exported Protein
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MENKSHAFWAGLFTVVMVAAIAAAAFLFNVDRSVRIPFDLIARTNVTGLYPDAAVRYRGLDVGKVQSIKFDREHPGQILI RILVDKNAPITHSTFGSLGLQGVTGLAFIQLDDTGRDTTPLASSAKSVAQLPMRPGLLDQLQARGDILIRQLEKTVRDVD ALLSPEMRDQLLATAASLQHAADGVTTLTAQMGPAVGKLPDTLTALDQTLASTNRMITNLNRPDGPLEGTLNKVGTAAQQ AGDALTAMNATLQDISARVGYDTLPRVNSLADDVRSAVRSVDRAAETFSETPNSVLFGAPHAAPGPGEPGFVWPAGHAAK
Sequences:
>Translated_320_residues MENKSHAFWAGLFTVVMVAAIAAAAFLFNVDRSVRIPFDLIARTNVTGLYPDAAVRYRGLDVGKVQSIKFDREHPGQILI RILVDKNAPITHSTFGSLGLQGVTGLAFIQLDDTGRDTTPLASSAKSVAQLPMRPGLLDQLQARGDILIRQLEKTVRDVD ALLSPEMRDQLLATAASLQHAADGVTTLTAQMGPAVGKLPDTLTALDQTLASTNRMITNLNRPDGPLEGTLNKVGTAAQQ AGDALTAMNATLQDISARVGYDTLPRVNSLADDVRSAVRSVDRAAETFSETPNSVLFGAPHAAPGPGEPGFVWPAGHAAK >Mature_320_residues MENKSHAFWAGLFTVVMVAAIAAAAFLFNVDRSVRIPFDLIARTNVTGLYPDAAVRYRGLDVGKVQSIKFDREHPGQILI RILVDKNAPITHSTFGSLGLQGVTGLAFIQLDDTGRDTTPLASSAKSVAQLPMRPGLLDQLQARGDILIRQLEKTVRDVD ALLSPEMRDQLLATAASLQHAADGVTTLTAQMGPAVGKLPDTLTALDQTLASTNRMITNLNRPDGPLEGTLNKVGTAAQQ AGDALTAMNATLQDISARVGYDTLPRVNSLADDVRSAVRSVDRAAETFSETPNSVLFGAPHAAPGPGEPGFVWPAGHAAK
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33922; Mature: 33922
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKSHAFWAGLFTVVMVAAIAAAAFLFNVDRSVRIPFDLIARTNVTGLYPDAAVRYRGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHCCCCCCCCCHHHEECCC DVGKVQSIKFDREHPGQILIRILVDKNAPITHSTFGSLGLQGVTGLAFIQLDDTGRDTTP CCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCC LASSAKSVAQLPMRPGLLDQLQARGDILIRQLEKTVRDVDALLSPEMRDQLLATAASLQH HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AADGVTTLTAQMGPAVGKLPDTLTALDQTLASTNRMITNLNRPDGPLEGTLNKVGTAAQQ HHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AGDALTAMNATLQDISARVGYDTLPRVNSLADDVRSAVRSVDRAAETFSETPNSVLFGAP HCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC HAAPGPGEPGFVWPAGHAAK CCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MENKSHAFWAGLFTVVMVAAIAAAAFLFNVDRSVRIPFDLIARTNVTGLYPDAAVRYRGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHCCCCCCCCCHHHEECCC DVGKVQSIKFDREHPGQILIRILVDKNAPITHSTFGSLGLQGVTGLAFIQLDDTGRDTTP CCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCC LASSAKSVAQLPMRPGLLDQLQARGDILIRQLEKTVRDVDALLSPEMRDQLLATAASLQH HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AADGVTTLTAQMGPAVGKLPDTLTALDQTLASTNRMITNLNRPDGPLEGTLNKVGTAAQQ HHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH AGDALTAMNATLQDISARVGYDTLPRVNSLADDVRSAVRSVDRAAETFSETPNSVLFGAP HCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC HAAPGPGEPGFVWPAGHAAK CCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA