Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183222708

Identifier: 183222708

GI number: 183222708

Start: 3477452

End: 3478732

Strand: Reverse

Name: 183222708

Synonym: LEPBI_I3364

Alternate gene names: NA

Gene position: 3478732-3477452 (Counterclockwise)

Preceding gene: 183222709

Following gene: 183222707

Centisome position: 96.64

GC content: 41.53

Gene sequence:

>1281_bases
ATGAAAAATTCATTCAAAAAAAGCCTGGTGCTCTTTTCCATCGCATTGATGGGATTCACTGCGGTGAATTGTACAGAAAG
TAAAAAAGATGATAGTCTTTTACTTGCAGCATTGTTGTTTTCAAACCAAGGTGTTGCAGGATCTGACTTATGTGATGGTG
TTGGTGTACCAACTCCTACTCAAATTCTAGAGGGAACTATCTCCTCTGCAGTGACTGTAAGCGGTTCTGCACTGCTTAGA
GGAACTGTAAACGTTACAAATGGTGGTTCTATCACTGTGCTACCAAAATCTGTCATTTACGGAGAAAGAGGATCTTCACT
TTTCGTCTATGAAGGCGGAACCCTTTCTGCAATTGGTACAGCAGCTCAACCAATTTGTTTTACTTCGGCGGCAACTGTTG
GAACAAGAGCGCCTGGTGATTGGGGTGGAATCGTAATCGTTGGAAACAGCGCGATTAAAGCAAATACGGCACCAAATGAT
ACGGAAGGAACATCTCCCAGATCATACCCAGGAACGTTAAATGGAATTGCAAATTTAAAGTATGTTGTCATTGAATTCGT
TGGAAACGAGGTGGCACCTGGAAACGAATTGAATGGTCTTTCTAGTTATACAGTGACGCAAGATAGTAACTACGATTATG
TGCAAATTCACAGACCATTGGATGATGGATTTGAATGGTGGGGCGGAAATGTAAATGGTTCACACCTTTTAGTATCTGGT
GGTATGGATGATGACTTTGATGTGGATGAAGGATTTACAGGAACACTCAATCACATTATCAGTGTAAAATATCCAGAGTC
TTGTGGAGGAACAAAATCGTCTGACCCACATGGTTTTGAAATGGATGGAACAGAAGGTGGTGCTGTAATTGCAGGACCTT
CAAACCCTACTGTGACAAACTTCACGACAATTGGTCAATCCTACACTGGTGGCGTTGGTATGCGAATCAGAGAAAGACAC
ACAGGAAATTTTTCAAAGGGTTTGGTTTATGGATACGTAACAAACAACTTTCAATGTGATGCAAACACAAATCCTACATC
TTGGACAAACGTAAAAGGTCAAAGTGGAAAAGGTGCAACAATTGATGGTGCTTGTACCAATATGGTAAACAACACTGAAA
TCACTGCACTTCCAATTACAACATTAGGAAACATTGAAACTTGCGGAACTGGAGCAACTAAGCCAGATTTCACAACTACA
TTTGGTGATGGTTCTCTTGGTGGCGGATCAGTCGCTGAAGGTAAGTGGTGGGATGGCTGGGCTGTCTTTAGAAGCAAATA
A

Upstream 100 bases:

>100_bases
AAGAACATAGTTTCCATAGCTAGAGGGAGAATTTTAACGAATCCCTTTCGGGAAGACCCGCTAGCGAAACAAATTCGAAT
CATTTCGAAAGAGGATTAAA

Downstream 100 bases:

>100_bases
ACAAATTTTAAAAAATTATAAAAAAGGCTTCGGAATTTCCGGAGCCTTTTTTATTTTAAAACAATGAAACAGAAAACATT
CATAATTATTATCATCGTTG

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Parallel Beta-Helix Repeat Protein

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPTQILEGTISSAVTVSGSALLR
GTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGTAAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPND
TEGTSPRSYPGTLNGIANLKYVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG
GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTNFTTIGQSYTGGVGMRIRERH
TGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGATIDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTT
FGDGSLGGGSVAEGKWWDGWAVFRSK

Sequences:

>Translated_426_residues
MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPTQILEGTISSAVTVSGSALLR
GTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGTAAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPND
TEGTSPRSYPGTLNGIANLKYVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG
GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTNFTTIGQSYTGGVGMRIRERH
TGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGATIDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTT
FGDGSLGGGSVAEGKWWDGWAVFRSK
>Mature_426_residues
MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPTQILEGTISSAVTVSGSALLR
GTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGTAAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPND
TEGTSPRSYPGTLNGIANLKYVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG
GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTNFTTIGQSYTGGVGMRIRERH
TGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGATIDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTT
FGDGSLGGGSVAEGKWWDGWAVFRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44226; Mature: 44226

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPT
CCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHEEEEEHHCCCCCCCCHHHCCCCCCCHH
QILEGTISSAVTVSGSALLRGTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGT
HHHHHHHHCEEEECCCEEEEEEEEECCCCEEEEEEHHEEECCCCCEEEEECCCCEEECCC
AAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPNDTEGTSPRSYPGTLNGIANLK
CCCCEEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
YVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEEC
GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTN
CCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCEEECCCCCCEEEECCCCCCEEE
FTTIGQSYTGGVGMRIRERHTGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGAT
EEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE
IDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTTFGDGSLGGGSVAEGKWWDGW
ECHHHHHCCCCCEEEEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCE
AVFRSK
EEEECC
>Mature Secondary Structure
MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPT
CCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHEEEEEHHCCCCCCCCHHHCCCCCCCHH
QILEGTISSAVTVSGSALLRGTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGT
HHHHHHHHCEEEECCCEEEEEEEEECCCCEEEEEEHHEEECCCCCEEEEECCCCEEECCC
AAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPNDTEGTSPRSYPGTLNGIANLK
CCCCEEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
YVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEEC
GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTN
CCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCEEECCCCCCEEEECCCCCCEEE
FTTIGQSYTGGVGMRIRERHTGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGAT
EEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE
IDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTTFGDGSLGGGSVAEGKWWDGW
ECHHHHHCCCCCEEEEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCE
AVFRSK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA