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The map label for this gene is yebA [H]

Identifier: 183222679

GI number: 183222679

Start: 3443135

End: 3444037

Strand: Reverse

Name: yebA [H]

Synonym: LEPBI_I3335

Alternate gene names: 183222679

Gene position: 3444037-3443135 (Counterclockwise)

Preceding gene: 183222682

Following gene: 183222678

Centisome position: 95.68

GC content: 36.66

Gene sequence:

>903_bases
ATGTCTAAAAGCGTCGTTTTTCTCAATTGGGCAGTGATTTGGGTTAGTTTAGGTGCCGTTTCCCATTTGATTGCTGGACC
ACTCACCTTAGCCAATTTAGAATATAGCAATCCGTCTCTCAAAAATCTTCGTTCTGAAATCAAAGAAAACTTACGAATTT
CCAAATCAGGGACCAAAAAAGAAATCCTCATTCCCTTGAAATATTACGAATACAAAGTTCAAAAAGAAGATAATTTCTTC
AAAATCATGGCCCGCACAGGAATGGATTTGGAAACGCTTTCTTCCGTTAATGAGTTGAGTTCCCCTCATGATCTTTCGCA
TGGAATGGTTTTAGAAATTCCCAATATGCGAGGGACTTTTCACCCAGAAGAGACTGACGGTAATGAAAAAACGAAACAAA
TTCTTGCTGAGAAGTACCAAGTCGACGCCAATAAATTACAATATGATTCAGAAAGAGGAAAATGGTTTTTACCAGGAATC
TCAATGGGAAAATCCGAAAAATCTTTCTTTTATGGATTTGGATTTCAATTTCCACTAACAACTGCTAGAATTTCTTCCAA
CTTTGGAAAACGTTTGGACCCATTTACTAAAAAGGAAACATTTCATGGTGGTTTGGATATGGCCGCCAAACAAGGATCAG
ATGTTTATTCTTCAATGGAAGGAGAAGTAAGTTTTGTTGGAAACCAAGGTGGATATGGAAACTTAATCATCATCAAACAT
AGTTTGGGGTATGAAACAAGATACGGCCATCTTTTGAACTTTGCTGTGAAACAAGGACAAAAGGTAAAAAAAGGCGAAAA
AATTGGAGAAGTTGGTCAAACAGGTAGAGCGACCGGTCCACATTTACATTTTGAAATTAGAAGAAATTCAAAAAGACAAA
GACCTATTTTTCATTCACACTAA

Upstream 100 bases:

>100_bases
TCTCAAAATATCGATTCTGCATCTGCCTTACAGTTCCTCAATTTCGGCAAGAATCGTCATCGTTTTTTTGAGAAAAGGTC
GATAATCATTTTAGAAGATT

Downstream 100 bases:

>100_bases
AAAAAGATTTTACGACCTTTCTTGATTGTGTTACTTCTTGGAAACAATGGACTTTGAAATTCCCCAAGAAGTAGAAACAC
TTCGTAAAAATATCCAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSKSVVFLNWAVIWVSLGAVSHLIAGPLTLANLEYSNPSLKNLRSEIKENLRISKSGTKKEILIPLKYYEYKVQKEDNFF
KIMARTGMDLETLSSVNELSSPHDLSHGMVLEIPNMRGTFHPEETDGNEKTKQILAEKYQVDANKLQYDSERGKWFLPGI
SMGKSEKSFFYGFGFQFPLTTARISSNFGKRLDPFTKKETFHGGLDMAAKQGSDVYSSMEGEVSFVGNQGGYGNLIIIKH
SLGYETRYGHLLNFAVKQGQKVKKGEKIGEVGQTGRATGPHLHFEIRRNSKRQRPIFHSH

Sequences:

>Translated_300_residues
MSKSVVFLNWAVIWVSLGAVSHLIAGPLTLANLEYSNPSLKNLRSEIKENLRISKSGTKKEILIPLKYYEYKVQKEDNFF
KIMARTGMDLETLSSVNELSSPHDLSHGMVLEIPNMRGTFHPEETDGNEKTKQILAEKYQVDANKLQYDSERGKWFLPGI
SMGKSEKSFFYGFGFQFPLTTARISSNFGKRLDPFTKKETFHGGLDMAAKQGSDVYSSMEGEVSFVGNQGGYGNLIIIKH
SLGYETRYGHLLNFAVKQGQKVKKGEKIGEVGQTGRATGPHLHFEIRRNSKRQRPIFHSH
>Mature_299_residues
SKSVVFLNWAVIWVSLGAVSHLIAGPLTLANLEYSNPSLKNLRSEIKENLRISKSGTKKEILIPLKYYEYKVQKEDNFFK
IMARTGMDLETLSSVNELSSPHDLSHGMVLEIPNMRGTFHPEETDGNEKTKQILAEKYQVDANKLQYDSERGKWFLPGIS
MGKSEKSFFYGFGFQFPLTTARISSNFGKRLDPFTKKETFHGGLDMAAKQGSDVYSSMEGEVSFVGNQGGYGNLIIIKHS
LGYETRYGHLLNFAVKQGQKVKKGEKIGEVGQTGRATGPHLHFEIRRNSKRQRPIFHSH

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=177, Percent_Identity=36.1581920903955, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI87082174, Length=229, Percent_Identity=28.82096069869, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789099, Length=109, Percent_Identity=39.4495412844037, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33857; Mature: 33726

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSVVFLNWAVIWVSLGAVSHLIAGPLTLANLEYSNPSLKNLRSEIKENLRISKSGTKK
CCCCEEEEEHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEECCCCCCC
EILIPLKYYEYKVQKEDNFFKIMARTGMDLETLSSVNELSSPHDLSHGMVLEIPNMRGTF
EEEEEEEHEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
HPEETDGNEKTKQILAEKYQVDANKLQYDSERGKWFLPGISMGKSEKSFFYGFGFQFPLT
CCCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCCEEECCCCCCCCCCCEEEECCCCCCCH
TARISSNFGKRLDPFTKKETFHGGLDMAAKQGSDVYSSMEGEVSFVGNQGGYGNLIIIKH
HHHHHHHCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHCCCCCEEEEECCCCCCCEEEEEE
SLGYETRYGHLLNFAVKQGQKVKKGEKIGEVGQTGRATGPHLHFEIRRNSKRQRPIFHSH
CCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SKSVVFLNWAVIWVSLGAVSHLIAGPLTLANLEYSNPSLKNLRSEIKENLRISKSGTKK
CCCEEEEEHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCEECCCCCCC
EILIPLKYYEYKVQKEDNFFKIMARTGMDLETLSSVNELSSPHDLSHGMVLEIPNMRGTF
EEEEEEEHEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
HPEETDGNEKTKQILAEKYQVDANKLQYDSERGKWFLPGISMGKSEKSFFYGFGFQFPLT
CCCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCCEEECCCCCCCCCCCEEEECCCCCCCH
TARISSNFGKRLDPFTKKETFHGGLDMAAKQGSDVYSSMEGEVSFVGNQGGYGNLIIIKH
HHHHHHHCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHCCCCCEEEEECCCCCCCEEEEEE
SLGYETRYGHLLNFAVKQGQKVKKGEKIGEVGQTGRATGPHLHFEIRRNSKRQRPIFHSH
CCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]