| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fliW [H]
Identifier: 183222556
GI number: 183222556
Start: 3327055
End: 3327558
Strand: Reverse
Name: fliW [H]
Synonym: LEPBI_I3211
Alternate gene names: 183222556
Gene position: 3327558-3327055 (Counterclockwise)
Preceding gene: 183222557
Following gene: 183222555
Centisome position: 92.44
GC content: 36.51
Gene sequence:
>504_bases ATGACAGGCACATTAGAAAGATTAGAAACAACAGGAACTAGAATGTCGGTAACGATTCATACAAAACCTTTCGGAACCAT CCAAGTGGATTCAAAACAAATTCTAAAATTCCCGCAAGGGTTACTAGGATTTGAAGAATTTGATGAATATGCACTGATTG AAGAAAGTGCAGAAAGTCCATTTAAGTGGTTACAATCAACTAAAGAATCGGGTCTTGCCTTCATTGTGATCCAACCCGAA CTATTTATGAATCAGTATAAACCAGCAATCAGTGATGAAGAATTACATGATATTGGTTTAACAAGTTGGAAAGACGGAAT TATTTTTTTGATCGTTACAATTCCTCATGACAATCCCAAAGGAATGACCGCCAATTTACAAGGGCCCATCATTCTCAATG GAAAAGAGGGAAAAGGCAAACAATGTATTTCCCGAGATGAAAACCACTCAATTCGAAAAAACATCATTGAGTCAATGGAA GAAATGTCTTCCGAAAAGGTATAG
Upstream 100 bases:
>100_bases AATATGAAGTGGTTAGAAACGATTCATAGTTATGCGCTTAATGTTGGATCCAAAATCATCAAACCAACATTGATGGATTT TCTCAGGTAATTAGGACAGA
Downstream 100 bases:
>100_bases CTCGTGTTAGTTTTAGCGAGGAGAAGTAACCAATCCATTATGATTGGCGATGATATTGAAATTGTCATCGTTGATATCAA AGGGGATCAAGTAAAGATTG
Product: flagellar assembly protein FliW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTGTLERLETTGTRMSVTIHTKPFGTIQVDSKQILKFPQGLLGFEEFDEYALIEESAESPFKWLQSTKESGLAFIVIQPE LFMNQYKPAISDEELHDIGLTSWKDGIIFLIVTIPHDNPKGMTANLQGPIILNGKEGKGKQCISRDENHSIRKNIIESME EMSSEKV
Sequences:
>Translated_167_residues MTGTLERLETTGTRMSVTIHTKPFGTIQVDSKQILKFPQGLLGFEEFDEYALIEESAESPFKWLQSTKESGLAFIVIQPE LFMNQYKPAISDEELHDIGLTSWKDGIIFLIVTIPHDNPKGMTANLQGPIILNGKEGKGKQCISRDENHSIRKNIIESME EMSSEKV >Mature_166_residues TGTLERLETTGTRMSVTIHTKPFGTIQVDSKQILKFPQGLLGFEEFDEYALIEESAESPFKWLQSTKESGLAFIVIQPEL FMNQYKPAISDEELHDIGLTSWKDGIIFLIVTIPHDNPKGMTANLQGPIILNGKEGKGKQCISRDENHSIRKNIIESMEE MSSEKV
Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum [H]
COG id: COG1699
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliW family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003775 [H]
Pfam domain/function: PF02623 FliW [H]
EC number: NA
Molecular weight: Translated: 18800; Mature: 18669
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTLERLETTGTRMSVTIHTKPFGTIQVDSKQILKFPQGLLGFEEFDEYALIEESAESP CCCCHHHHHCCCCEEEEEEEECCCCEEEECHHHHHHCCCHHCCHHHHHHHHHHHHCCCCH FKWLQSTKESGLAFIVIQPELFMNQYKPAISDEELHDIGLTSWKDGIIFLIVTIPHDNPK HHHHHHHHCCCEEEEEECCHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCC GMTANLQGPIILNGKEGKGKQCISRDENHSIRKNIIESMEEMSSEKV CEEEECCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGTLERLETTGTRMSVTIHTKPFGTIQVDSKQILKFPQGLLGFEEFDEYALIEESAESP CCCHHHHHCCCCEEEEEEEECCCCEEEECHHHHHHCCCHHCCHHHHHHHHHHHHCCCCH FKWLQSTKESGLAFIVIQPELFMNQYKPAISDEELHDIGLTSWKDGIIFLIVTIPHDNPK HHHHHHHHCCCEEEEEECCHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCC GMTANLQGPIILNGKEGKGKQCISRDENHSIRKNIIESMEEMSSEKV CEEEECCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA