| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222400
Identifier: 183222400
GI number: 183222400
Start: 3166930
End: 3167721
Strand: Direct
Name: 183222400
Synonym: LEPBI_I3054
Alternate gene names: NA
Gene position: 3166930-3167721 (Clockwise)
Preceding gene: 183222399
Following gene: 183222401
Centisome position: 87.98
GC content: 39.65
Gene sequence:
>792_bases ATGGGAATACTATCTTTTGTTTCCTTTCCTGTTTTCACACTTTATCCCGATTCCATCCAAGAACGATTTATACCACCTAA CGGATACAAACGAGTAGTTTATCCAAAAACAAGTTTTGCATCTTACTTACAAAACTTTCCCTTAAAACCGAAAGGAAGCC CAGTCCTTTTGTACAATGGGAACCACAAACAAAACCAAGTCCATGCGGCCGTTTTAGACTTTCCTCTATTGAAACGAGAC CTGATCCAATGTGCGGATGCCGTCATGAAACTCCGTGCCGAGTATTTTTATGCGCAAAAAAAATATGATGCGATCCAATT TAAAATCAGTAATGGGATGGAGGTTCCTTTCCATCGATTTGCCAAAGGGGAACGAGTGGATGTCAAAGGGAACAAAACCA GTTGGAAACAAGGGAAATTCAAAAAAGGGTATGGGCGCGATGTCTTTGAAGAATACTTACAATTTATCTACAGTTATGCG GGAACCATTTCCCTCAAATCGGAACTTGTCAAAAAATCAGTAATACAATTGGAACCTGGTGATGTTTGGATTGAAGCAGG ATCCCCAGGACATGTGGTGATGGTAGTAGACAAAGCCACGAGTGACGATGGACAAATGGTATTCCTTTTGGCTCAAAGTT ATATGCCGTCACAGGAAATGCACATTTTGAAATCGGAGGGTGAATACTCTCCTTGGTTTCCTCTTCCAAAAGGTAATAAT TTCCAAACCCCAGAATGGGAATTCCAAACAAATCAATTTTATGGATTTTTAAATCTAAAAAAATCTCCTTAG
Upstream 100 bases:
>100_bases AAACATTGGATTGGAATCAATTTTGAGAAAACATTTCGATAGAAATCGCGAAACTAAACTTTCTTCTAAGAGGAAATGGA ATCTCCTTTTCCATTGTGGA
Downstream 100 bases:
>100_bases TTTTCACTTTTCATTTTTCCAATCAAGGTGATACTGTCACTGTGTTGGGAAAAATGAAAAACATCGCCGTGTATTGCGGC TCTTCCTCCGGAAACGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MGILSFVSFPVFTLYPDSIQERFIPPNGYKRVVYPKTSFASYLQNFPLKPKGSPVLLYNGNHKQNQVHAAVLDFPLLKRD LIQCADAVMKLRAEYFYAQKKYDAIQFKISNGMEVPFHRFAKGERVDVKGNKTSWKQGKFKKGYGRDVFEEYLQFIYSYA GTISLKSELVKKSVIQLEPGDVWIEAGSPGHVVMVVDKATSDDGQMVFLLAQSYMPSQEMHILKSEGEYSPWFPLPKGNN FQTPEWEFQTNQFYGFLNLKKSP
Sequences:
>Translated_263_residues MGILSFVSFPVFTLYPDSIQERFIPPNGYKRVVYPKTSFASYLQNFPLKPKGSPVLLYNGNHKQNQVHAAVLDFPLLKRD LIQCADAVMKLRAEYFYAQKKYDAIQFKISNGMEVPFHRFAKGERVDVKGNKTSWKQGKFKKGYGRDVFEEYLQFIYSYA GTISLKSELVKKSVIQLEPGDVWIEAGSPGHVVMVVDKATSDDGQMVFLLAQSYMPSQEMHILKSEGEYSPWFPLPKGNN FQTPEWEFQTNQFYGFLNLKKSP >Mature_262_residues GILSFVSFPVFTLYPDSIQERFIPPNGYKRVVYPKTSFASYLQNFPLKPKGSPVLLYNGNHKQNQVHAAVLDFPLLKRDL IQCADAVMKLRAEYFYAQKKYDAIQFKISNGMEVPFHRFAKGERVDVKGNKTSWKQGKFKKGYGRDVFEEYLQFIYSYAG TISLKSELVKKSVIQLEPGDVWIEAGSPGHVVMVVDKATSDDGQMVFLLAQSYMPSQEMHILKSEGEYSPWFPLPKGNNF QTPEWEFQTNQFYGFLNLKKSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30203; Mature: 30072
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILSFVSFPVFTLYPDSIQERFIPPNGYKRVVYPKTSFASYLQNFPLKPKGSPVLLYNG CCHHHHHHCCEEEECCHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECC NHKQNQVHAAVLDFPLLKRDLIQCADAVMKLRAEYFYAQKKYDAIQFKISNGMEVPFHRF CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH AKGERVDVKGNKTSWKQGKFKKGYGRDVFEEYLQFIYSYAGTISLKSELVKKSVIQLEPG CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCC DVWIEAGSPGHVVMVVDKATSDDGQMVFLLAQSYMPSQEMHILKSEGEYSPWFPLPKGNN CEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHHEEEECCCCCCCCCCCCCCCC FQTPEWEFQTNQFYGFLNLKKSP CCCCCEEEECCEEEEEEEEECCC >Mature Secondary Structure GILSFVSFPVFTLYPDSIQERFIPPNGYKRVVYPKTSFASYLQNFPLKPKGSPVLLYNG CHHHHHHCCEEEECCHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECC NHKQNQVHAAVLDFPLLKRDLIQCADAVMKLRAEYFYAQKKYDAIQFKISNGMEVPFHRF CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH AKGERVDVKGNKTSWKQGKFKKGYGRDVFEEYLQFIYSYAGTISLKSELVKKSVIQLEPG CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCC DVWIEAGSPGHVVMVVDKATSDDGQMVFLLAQSYMPSQEMHILKSEGEYSPWFPLPKGNN CEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCHHHEEEECCCCCCCCCCCCCCCC FQTPEWEFQTNQFYGFLNLKKSP CCCCCEEEECCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA