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The map label for this gene is ypaA [H]

Identifier: 183222341

GI number: 183222341

Start: 3101541

End: 3101918

Strand: Direct

Name: ypaA [H]

Synonym: LEPBI_I2994

Alternate gene names: 183222341

Gene position: 3101541-3101918 (Clockwise)

Preceding gene: 183222340

Following gene: 183222342

Centisome position: 86.16

GC content: 37.04

Gene sequence:

>378_bases
ATGAAACTCACTTCACTCATACTCACTGGTTTTGTGGCAGTAGAACATGTTTTCATTTTGGTATTGGAAATGTTTTTATG
GAAAACAGAATTTGGAATGAAGGTATTCCAACTCACACCGGAAACTGCAGAAATCACAGCAAAGCTGGCAAAAAACCAAG
GATTGTACAATGGATTTTTAGCAGCAGGACTTTTTTGGGCCCTCTTTTTCATCAAAGACCAAAGTCAAAAATTCCAAACC
ATTTTGTTTTTTCTCATTTGTGTTGTGGTCGCAGGAATTTACGGTTCAGCCACTGCAAAATTTTCAATTTTGTTTTCGCA
AGGTTTGCCTGCATTTTTAGCCTTAGTTGTACATTGGTTGGCTTATCGTAAACAATGA

Upstream 100 bases:

>100_bases
CAACCAGAACGAACGGTTTTTTGAATTTTTTTTTCCAATCTTTGTCACAATGGAAAAAACCCGTTGTCCTAAGGAGAAAA
GGAATCGTTAGGAGGATTCA

Downstream 100 bases:

>100_bases
TCGAAGATCCACATTCATCTCTTTTAGAGGATTGTTTAAAAGGAAAAACAAAAGCGTTGGAAGGATTGATTCAATTCTTC
CAACCCAAAATATTTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKLTSLILTGFVAVEHVFILVLEMFLWKTEFGMKVFQLTPETAEITAKLAKNQGLYNGFLAAGLFWALFFIKDQSQKFQT
ILFFLICVVVAGIYGSATAKFSILFSQGLPAFLALVVHWLAYRKQ

Sequences:

>Translated_125_residues
MKLTSLILTGFVAVEHVFILVLEMFLWKTEFGMKVFQLTPETAEITAKLAKNQGLYNGFLAAGLFWALFFIKDQSQKFQT
ILFFLICVVVAGIYGSATAKFSILFSQGLPAFLALVVHWLAYRKQ
>Mature_125_residues
MKLTSLILTGFVAVEHVFILVLEMFLWKTEFGMKVFQLTPETAEITAKLAKNQGLYNGFLAAGLFWALFFIKDQSQKFQT
ILFFLICVVVAGIYGSATAKFSILFSQGLPAFLALVVHWLAYRKQ

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 14106; Mature: 14106

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSLILTGFVAVEHVFILVLEMFLWKTEFGMKVFQLTPETAEITAKLAKNQGLYNGFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCHHHHHH
AAGLFWALFFIKDQSQKFQTILFFLICVVVAGIYGSATAKFSILFSQGLPAFLALVVHWL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
AYRKQ
HHCCC
>Mature Secondary Structure
MKLTSLILTGFVAVEHVFILVLEMFLWKTEFGMKVFQLTPETAEITAKLAKNQGLYNGFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCHHHHHH
AAGLFWALFFIKDQSQKFQTILFFLICVVVAGIYGSATAKFSILFSQGLPAFLALVVHWL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
AYRKQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]