| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222340
Identifier: 183222340
GI number: 183222340
Start: 3099987
End: 3101399
Strand: Direct
Name: 183222340
Synonym: LEPBI_I2993
Alternate gene names: NA
Gene position: 3099987-3101399 (Clockwise)
Preceding gene: 183222339
Following gene: 183222341
Centisome position: 86.12
GC content: 38.85
Gene sequence:
>1413_bases GTGAGATTGGGGAGTGGTACATATAAGGTCAATCCATACTCTCTGATACTATTGAAAAATGGAAATTTAGTCGTGACGGC AGGTGTATTTGAAGAGTTAGCCTGGAACTCGCGGACTGGTGGGATTCATTATTCTTACATAGGTACACCTGGTACCAATA TGAACATTATTATGTTTTTGATCAATGGTAGGACATTTCAAATCGAATGGTTGGATTACCTCGGACCCACTTCCGCGACT TCGGATGATGCCAACATTGCACCCATCGCAGAAATGTCAAATGGAGACATCATTGTTTATACCTATGTGAATGGGACAGA ACAAGGAACTCCAATCTCTGGAAAAGCAAATGCAGATGCATACGTCGTTGCCAGATTCGATCAAAAAGGAAATCGTATTT GGAATACTTATCTCGATTTACCAATGAACTCTTTTGTCGCTGAAAAAATTGCACTCGTTGCGGATACAAATGATCTCATT CATTTATTTTTTACCCATAGTGCAATAGGTGCCAATACTCCTGATAGTTTAGGATTTCAGGAATTCCCTACTGCTAAAGT AGCAACTAACGGAACAACTGCGGGACAACAAGAAATTGGATGGGCGATCCTAAATTCCAATGGGACCGCTTCTTCACAAA CTTATCTACCCTCCATTAGCAGTAGTGAAATTTCGACGTCAACACTAGGTCCGAACAATAATATCTTGATTGGTGGATCA GCACTCGATAATTTCAATGGGTTCCCTGGACATCCATTGCCAAATTATAGTAGGATGATGTTTGCCAATTTATCAATTCA GAATCATGTGATCCAAAATGTCACTTACCTAGGTAATACGGACACAACATTCAATATTGGTGAAATCAGTTCCATCGTAA AAGGCAATGATGGATACTTTGCATCTGGAAATGCTGCCGGATCTTTTGGTAATCCATTCCATCAATATCAATATTTTTCC ACGGGGAACTTACGAAACCATGTATTTTTAAAATTTGATTGGAACGGTAATTTGATTTGGAACCAATTCGTTGGATCAAC TACTTCTAATGTTTTAGAATTTTTTCCTAAAATTACTTATATATCCTTCTTTGATGAATTCAGAGGGAACATCCTTTCTC CTATTGATGGAACACGATTCACTGGATTGGATGCATTGAGTTATGGAAACGGAATCAACGAATTACAAGATGTAACATTT CGCATTCGTAGCGGGGATGGTCGGTACCAATCGGTATATTATGAGACCAATGTTCCAGTCACACCACCTAACCCAAGCGT TTTAGTGGATTTTAATGTCCAATATCTGAATGTTTGTAATGGGCGAATTGCCAAATTAAAAAAGTATCTAAACTACCCTG CAGAAGAGGGGTTTATGGAAGTGAGTACAATTCCAGGAATCGAGGAACCATAA
Upstream 100 bases:
>100_bases TCTCAACAATCCCAGTGACCCAAATTCAAAAAGTTATTTAGAGACTGTATTATCCAATTTGTATTTAAACGCAATTTGCG ATCCAAGGACCAGAGGGAGT
Downstream 100 bases:
>100_bases AGGTTCCCATTCCAGGATTTTGTAAAAAATGCATTGATTCCCAACCAGAACGAACGGTTTTTTGAATTTTTTTTTCCAAT CTTTGTCACAATGGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MRLGSGTYKVNPYSLILLKNGNLVVTAGVFEELAWNSRTGGIHYSYIGTPGTNMNIIMFLINGRTFQIEWLDYLGPTSAT SDDANIAPIAEMSNGDIIVYTYVNGTEQGTPISGKANADAYVVARFDQKGNRIWNTYLDLPMNSFVAEKIALVADTNDLI HLFFTHSAIGANTPDSLGFQEFPTAKVATNGTTAGQQEIGWAILNSNGTASSQTYLPSISSSEISTSTLGPNNNILIGGS ALDNFNGFPGHPLPNYSRMMFANLSIQNHVIQNVTYLGNTDTTFNIGEISSIVKGNDGYFASGNAAGSFGNPFHQYQYFS TGNLRNHVFLKFDWNGNLIWNQFVGSTTSNVLEFFPKITYISFFDEFRGNILSPIDGTRFTGLDALSYGNGINELQDVTF RIRSGDGRYQSVYYETNVPVTPPNPSVLVDFNVQYLNVCNGRIAKLKKYLNYPAEEGFMEVSTIPGIEEP
Sequences:
>Translated_470_residues MRLGSGTYKVNPYSLILLKNGNLVVTAGVFEELAWNSRTGGIHYSYIGTPGTNMNIIMFLINGRTFQIEWLDYLGPTSAT SDDANIAPIAEMSNGDIIVYTYVNGTEQGTPISGKANADAYVVARFDQKGNRIWNTYLDLPMNSFVAEKIALVADTNDLI HLFFTHSAIGANTPDSLGFQEFPTAKVATNGTTAGQQEIGWAILNSNGTASSQTYLPSISSSEISTSTLGPNNNILIGGS ALDNFNGFPGHPLPNYSRMMFANLSIQNHVIQNVTYLGNTDTTFNIGEISSIVKGNDGYFASGNAAGSFGNPFHQYQYFS TGNLRNHVFLKFDWNGNLIWNQFVGSTTSNVLEFFPKITYISFFDEFRGNILSPIDGTRFTGLDALSYGNGINELQDVTF RIRSGDGRYQSVYYETNVPVTPPNPSVLVDFNVQYLNVCNGRIAKLKKYLNYPAEEGFMEVSTIPGIEEP >Mature_470_residues MRLGSGTYKVNPYSLILLKNGNLVVTAGVFEELAWNSRTGGIHYSYIGTPGTNMNIIMFLINGRTFQIEWLDYLGPTSAT SDDANIAPIAEMSNGDIIVYTYVNGTEQGTPISGKANADAYVVARFDQKGNRIWNTYLDLPMNSFVAEKIALVADTNDLI HLFFTHSAIGANTPDSLGFQEFPTAKVATNGTTAGQQEIGWAILNSNGTASSQTYLPSISSSEISTSTLGPNNNILIGGS ALDNFNGFPGHPLPNYSRMMFANLSIQNHVIQNVTYLGNTDTTFNIGEISSIVKGNDGYFASGNAAGSFGNPFHQYQYFS TGNLRNHVFLKFDWNGNLIWNQFVGSTTSNVLEFFPKITYISFFDEFRGNILSPIDGTRFTGLDALSYGNGINELQDVTF RIRSGDGRYQSVYYETNVPVTPPNPSVLVDFNVQYLNVCNGRIAKLKKYLNYPAEEGFMEVSTIPGIEEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51528; Mature: 51528
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGSGTYKVNPYSLILLKNGNLVVTAGVFEELAWNSRTGGIHYSYIGTPGTNMNIIMFL CCCCCCEEEECCEEEEEEECCCEEEEEHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEE INGRTFQIEWLDYLGPTSATSDDANIAPIAEMSNGDIIVYTYVNGTEQGTPISGKANADA ECCCEEEEEEEHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCE YVVARFDQKGNRIWNTYLDLPMNSFVAEKIALVADTNDLIHLFFTHSAIGANTPDSLGFQ EEEEEECCCCCEEEEEEECCCCHHHHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC EFPTAKVATNGTTAGQQEIGWAILNSNGTASSQTYLPSISSSEISTSTLGPNNNILIGGS CCCCEEEECCCCCCCCHHCCEEEECCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEECC ALDNFNGFPGHPLPNYSRMMFANLSIQNHVIQNVTYLGNTDTTFNIGEISSIVKGNDGYF CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHEEEEECCCCCEEEHHHHHHHEECCCCEE ASGNAAGSFGNPFHQYQYFSTGNLRNHVFLKFDWNGNLIWNQFVGSTTSNVLEFFPKITY ECCCCCCCCCCCHHHEEEEECCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHH ISFFDEFRGNILSPIDGTRFTGLDALSYGNGINELQDVTFRIRSGDGRYQSVYYETNVPV EEHHHHHCCCCCCCCCCCEECCCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCC TPPNPSVLVDFNVQYLNVCNGRIAKLKKYLNYPAEEGFMEVSTIPGIEEP CCCCCCEEEEECEEEEEECCCHHHHHHHHHCCCHHHCEEEEECCCCCCCC >Mature Secondary Structure MRLGSGTYKVNPYSLILLKNGNLVVTAGVFEELAWNSRTGGIHYSYIGTPGTNMNIIMFL CCCCCCEEEECCEEEEEEECCCEEEEEHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEE INGRTFQIEWLDYLGPTSATSDDANIAPIAEMSNGDIIVYTYVNGTEQGTPISGKANADA ECCCEEEEEEEHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCE YVVARFDQKGNRIWNTYLDLPMNSFVAEKIALVADTNDLIHLFFTHSAIGANTPDSLGFQ EEEEEECCCCCEEEEEEECCCCHHHHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC EFPTAKVATNGTTAGQQEIGWAILNSNGTASSQTYLPSISSSEISTSTLGPNNNILIGGS CCCCEEEECCCCCCCCHHCCEEEECCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEECC ALDNFNGFPGHPLPNYSRMMFANLSIQNHVIQNVTYLGNTDTTFNIGEISSIVKGNDGYF CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHEEEEECCCCCEEEHHHHHHHEECCCCEE ASGNAAGSFGNPFHQYQYFSTGNLRNHVFLKFDWNGNLIWNQFVGSTTSNVLEFFPKITY ECCCCCCCCCCCHHHEEEEECCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHH ISFFDEFRGNILSPIDGTRFTGLDALSYGNGINELQDVTFRIRSGDGRYQSVYYETNVPV EEHHHHHCCCCCCCCCCCEECCCCHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCC TPPNPSVLVDFNVQYLNVCNGRIAKLKKYLNYPAEEGFMEVSTIPGIEEP CCCCCCEEEEECEEEEEECCCHHHHHHHHHCCCHHHCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA