| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222222
Identifier: 183222222
GI number: 183222222
Start: 2965758
End: 2966327
Strand: Direct
Name: 183222222
Synonym: LEPBI_I2873
Alternate gene names: NA
Gene position: 2965758-2966327 (Clockwise)
Preceding gene: 183222221
Following gene: 183222223
Centisome position: 82.39
GC content: 35.79
Gene sequence:
>570_bases ATGGAAAAACCAATGAAATCAATCCCTTGGATCGAATTTAAAAAACATTTAGAACTCTATCCTGAATTACAATTGAAATT TGTATATAATAATGATCAGACAATTTTTCCAAATTACCATATCACAGAATTTAAATTGGCAACCATTGAAGCGGTTGATT GTGGCGGGAATTTAGATACTTGGAAAGAGATCATCTTACAGGTATTAGAACCGAAGGTAAACACAGAAACAGAGGCCATG AGTTTGGGAAAAATTGCCTCTATCTATGCAAAAGTTTCCAATGCCATTTCCATTCCAGACCAATCCATTTTAAGGATCGA ATTTGGAAATACATCCACCGCGATGAGACAGTATTTTGTTTCAGAGATGAAAATAGATGGATCGGAACTTGTTCTTTCCC TAATGGATGGAGCAACCGAATGCAAAGCCAAATCCAGCTGTGGAATCCCAAAATCTGATGAAAATGAAAACGGAATGACA AAAGAAAATCCAAAAATAGAGATCACTTCTTCTTCCTGTTGCAATCCAAGTGGATCCAAAAAAACAAAAGAATCAGCAGG TTGTTGTTAG
Upstream 100 bases:
>100_bases AAACAAGGAACGGAAACGGAAATTTGGCAAGCATTTGCAGAGACAAGAGAAGAGATTCGCACCTATTGTGAAAATTTTGT GAACCAGGAAGTAAACTAAC
Downstream 100 bases:
>100_bases ATGAAACAATTATCTTTTTTAGATCGTTATTTGACCGTTTGGATCTTTGGAGCCATGGCCATTGGAGTTTTGATTGGAAA ATTTCTGCCATCGTTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MEKPMKSIPWIEFKKHLELYPELQLKFVYNNDQTIFPNYHITEFKLATIEAVDCGGNLDTWKEIILQVLEPKVNTETEAM SLGKIASIYAKVSNAISIPDQSILRIEFGNTSTAMRQYFVSEMKIDGSELVLSLMDGATECKAKSSCGIPKSDENENGMT KENPKIEITSSSCCNPSGSKKTKESAGCC
Sequences:
>Translated_189_residues MEKPMKSIPWIEFKKHLELYPELQLKFVYNNDQTIFPNYHITEFKLATIEAVDCGGNLDTWKEIILQVLEPKVNTETEAM SLGKIASIYAKVSNAISIPDQSILRIEFGNTSTAMRQYFVSEMKIDGSELVLSLMDGATECKAKSSCGIPKSDENENGMT KENPKIEITSSSCCNPSGSKKTKESAGCC >Mature_189_residues MEKPMKSIPWIEFKKHLELYPELQLKFVYNNDQTIFPNYHITEFKLATIEAVDCGGNLDTWKEIILQVLEPKVNTETEAM SLGKIASIYAKVSNAISIPDQSILRIEFGNTSTAMRQYFVSEMKIDGSELVLSLMDGATECKAKSSCGIPKSDENENGMT KENPKIEITSSSCCNPSGSKKTKESAGCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21018; Mature: 21018
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPMKSIPWIEFKKHLELYPELQLKFVYNNDQTIFPNYHITEFKLATIEAVDCGGNLDT CCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEECCCCCEEEEEEEEEEEEECCCCHHH WKEIILQVLEPKVNTETEAMSLGKIASIYAKVSNAISIPDQSILRIEFGNTSTAMRQYFV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHH SEMKIDGSELVLSLMDGATECKAKSSCGIPKSDENENGMTKENPKIEITSSSCCNPSGSK HHHCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC KTKESAGCC CCCCCCCCC >Mature Secondary Structure MEKPMKSIPWIEFKKHLELYPELQLKFVYNNDQTIFPNYHITEFKLATIEAVDCGGNLDT CCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEECCCCCEEEEEEEEEEEEECCCCHHH WKEIILQVLEPKVNTETEAMSLGKIASIYAKVSNAISIPDQSILRIEFGNTSTAMRQYFV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHH SEMKIDGSELVLSLMDGATECKAKSSCGIPKSDENENGMTKENPKIEITSSSCCNPSGSK HHHCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC KTKESAGCC CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA