| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222201
Identifier: 183222201
GI number: 183222201
Start: 2941181
End: 2942695
Strand: Direct
Name: 183222201
Synonym: LEPBI_I2851
Alternate gene names: NA
Gene position: 2941181-2942695 (Clockwise)
Preceding gene: 183222200
Following gene: 183222202
Centisome position: 81.71
GC content: 40.33
Gene sequence:
>1515_bases ATGAGAAATAAATATACTCTATTGGCGACGATCGTTGCTACCTTATTTTCCCAGGCTTCCCTTTTTGCGCAGGATAAAAA GGAAAAGGATAAGTCTTGGTATGAGTTGGTAAATTTTTCTGGATATGTGGACGTATACTATAACTATACTTCAAATAACC GGCAAGGGGCAACCCAGGATACAGCGGGAACTTTTCACACTTACAACAAACAATTTGCTGTAAATGCTGTGAAACTCGCA ATGGAAAAGTTGGCAGATAAGGACAGTCCTTGGGGCTTCCGTATTGATATGCAAAATGGACAGAACAACATGTACCAAGA GCGTCCGTACCAAACTACTAACTCTCTCCACAACATGCAATTGTTACAACAAGCTTATGTATCAGCTTACTTTCCTGTTT TAAAAGGATTAACAGTTGATGCAGGAAAGATGGCAACTCATATCGGTTTGGAGTTACTTGACTCAAAAGATAACATAGCT TATACAATTGGTTATGTGTTCTTTAACACAATCCCCTTCATTCACACTGGTGCACGGGCAAACTTACAGATCAATGATCG ATTGTCGACAGGCCTTTACCTTTACAATAGTGCCCAAGGGACTGGTTACACTGGAAATGGACAACAATTCGGTTATGTAG GTGTTACACCTTATGGTGATGCAGCAGGTGGATCAAGTTTGACAAGCACACAACAACATGCGTATGCGGATGGACCGAAC CCAACAAGAGCAATCGGAACACAAGTGAAGTATGATGTTGTCCCTGATAAGTTTCAAGTTGTTTGGAACACATTGCAAGC AAATGACAACATCAAGGGAAGACAAAATAACGGATTGTATTACCTAGAACAAGCTTCAGGCACAGCTTTCCCAAAACAAT CTGCTTTTAAAACAGACAATTGGATGATCCAAAACTTGATCTTAATCTTCAAACCAACTGATAAATTGACAACCATCTTT GACTATACTTACGGTGAAAGAAATGGACAAACTAATACTGCCGCGTTTGGATATGAAGCAGGTGGAATCACAAAAACAAA GTTAGATGCTGCATTACCTGGTCTTGTTCCAGCTTTACCTACAGAATTGACTGCCGCTGGACTTACAAACGATACAAATC TTAGTAGGGAAAACAAAATCAAAAGAATATACCAAACTTACCAAGTGCAAGCAAAGTATCAATTCACTGACTTCTTCGCA CTAGGTTTCCGTTTTGAGTATTTGGATGACAAACGTTATGGTGGAGCACTTGTTGTGAACCCTCCACTATTTGCTGTCAC TCCAGCCGACCGTTACGATCTCAAATTCCAAGATTCCATTGGAGCAAGAGCAGTTAGTAACTATGGCCAAATCAAAACAC TCACCTTTACTCCAACATTTGATCTCACTGAAAACCTACAAGTGAAAGTGGATTTGAGAAGAGATTGGGGTCCAGGACAA CAATTCGTAGATACATCTGGAAGACCGGCGTCTCAGCAAAACGGTATCATCGTTGGTATGGTAGCTAAATTCTAA
Upstream 100 bases:
>100_bases TGAAACTCCCAAAGTACTAAATTTTCTTCTCATTCCCATCGCAAGTCATGCAAACCTGGTACACAACTTGCACATCTAGT TCACATAGGAGAAATGGCAA
Downstream 100 bases:
>100_bases GGAGATGAAAATGAATCAGAATAAAATAACTTTGAAATCAAGTTTAATTGGAATCTCTTTTGCACTTCTTCTCGCAACTG GATTTGTTGGTTGCACAGAA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MRNKYTLLATIVATLFSQASLFAQDKKEKDKSWYELVNFSGYVDVYYNYTSNNRQGATQDTAGTFHTYNKQFAVNAVKLA MEKLADKDSPWGFRIDMQNGQNNMYQERPYQTTNSLHNMQLLQQAYVSAYFPVLKGLTVDAGKMATHIGLELLDSKDNIA YTIGYVFFNTIPFIHTGARANLQINDRLSTGLYLYNSAQGTGYTGNGQQFGYVGVTPYGDAAGGSSLTSTQQHAYADGPN PTRAIGTQVKYDVVPDKFQVVWNTLQANDNIKGRQNNGLYYLEQASGTAFPKQSAFKTDNWMIQNLILIFKPTDKLTTIF DYTYGERNGQTNTAAFGYEAGGITKTKLDAALPGLVPALPTELTAAGLTNDTNLSRENKIKRIYQTYQVQAKYQFTDFFA LGFRFEYLDDKRYGGALVVNPPLFAVTPADRYDLKFQDSIGARAVSNYGQIKTLTFTPTFDLTENLQVKVDLRRDWGPGQ QFVDTSGRPASQQNGIIVGMVAKF
Sequences:
>Translated_504_residues MRNKYTLLATIVATLFSQASLFAQDKKEKDKSWYELVNFSGYVDVYYNYTSNNRQGATQDTAGTFHTYNKQFAVNAVKLA MEKLADKDSPWGFRIDMQNGQNNMYQERPYQTTNSLHNMQLLQQAYVSAYFPVLKGLTVDAGKMATHIGLELLDSKDNIA YTIGYVFFNTIPFIHTGARANLQINDRLSTGLYLYNSAQGTGYTGNGQQFGYVGVTPYGDAAGGSSLTSTQQHAYADGPN PTRAIGTQVKYDVVPDKFQVVWNTLQANDNIKGRQNNGLYYLEQASGTAFPKQSAFKTDNWMIQNLILIFKPTDKLTTIF DYTYGERNGQTNTAAFGYEAGGITKTKLDAALPGLVPALPTELTAAGLTNDTNLSRENKIKRIYQTYQVQAKYQFTDFFA LGFRFEYLDDKRYGGALVVNPPLFAVTPADRYDLKFQDSIGARAVSNYGQIKTLTFTPTFDLTENLQVKVDLRRDWGPGQ QFVDTSGRPASQQNGIIVGMVAKF >Mature_504_residues MRNKYTLLATIVATLFSQASLFAQDKKEKDKSWYELVNFSGYVDVYYNYTSNNRQGATQDTAGTFHTYNKQFAVNAVKLA MEKLADKDSPWGFRIDMQNGQNNMYQERPYQTTNSLHNMQLLQQAYVSAYFPVLKGLTVDAGKMATHIGLELLDSKDNIA YTIGYVFFNTIPFIHTGARANLQINDRLSTGLYLYNSAQGTGYTGNGQQFGYVGVTPYGDAAGGSSLTSTQQHAYADGPN PTRAIGTQVKYDVVPDKFQVVWNTLQANDNIKGRQNNGLYYLEQASGTAFPKQSAFKTDNWMIQNLILIFKPTDKLTTIF DYTYGERNGQTNTAAFGYEAGGITKTKLDAALPGLVPALPTELTAAGLTNDTNLSRENKIKRIYQTYQVQAKYQFTDFFA LGFRFEYLDDKRYGGALVVNPPLFAVTPADRYDLKFQDSIGARAVSNYGQIKTLTFTPTFDLTENLQVKVDLRRDWGPGQ QFVDTSGRPASQQNGIIVGMVAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56262; Mature: 56262
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKYTLLATIVATLFSQASLFAQDKKEKDKSWYELVNFSGYVDVYYNYTSNNRQGATQD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEEECCCCCCCCCCC TAGTFHTYNKQFAVNAVKLAMEKLADKDSPWGFRIDMQNGQNNMYQERPYQTTNSLHNMQ CCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH LLQQAYVSAYFPVLKGLTVDAGKMATHIGLELLDSKDNIAYTIGYVFFNTIPFIHTGARA HHHHHHHHHHHHHHCCCEECCHHHHHHHCEEEECCCCCEEEEEEEHHHCCCCEEECCCEE NLQINDRLSTGLYLYNSAQGTGYTGNGQQFGYVGVTPYGDAAGGSSLTSTQQHAYADGPN EEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCC PTRAIGTQVKYDVVPDKFQVVWNTLQANDNIKGRQNNGLYYLEQASGTAFPKQSAFKTDN CHHHHCCEEEEECCCCHHEEHEEHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC WMIQNLILIFKPTDKLTTIFDYTYGERNGQTNTAAFGYEAGGITKTKLDAALPGLVPALP EEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEHHHHHHHCCCCHHCCC TELTAAGLTNDTNLSRENKIKRIYQTYQVQAKYQFTDFFALGFRFEYLDDKRYGGALVVN CHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEC PPLFAVTPADRYDLKFQDSIGARAVSNYGQIKTLTFTPTFDLTENLQVKVDLRRDWGPGQ CCEEEECCCCCCCEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCC QFVDTSGRPASQQNGIIVGMVAKF HHHCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MRNKYTLLATIVATLFSQASLFAQDKKEKDKSWYELVNFSGYVDVYYNYTSNNRQGATQD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEEECCCCCCCCCCC TAGTFHTYNKQFAVNAVKLAMEKLADKDSPWGFRIDMQNGQNNMYQERPYQTTNSLHNMQ CCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH LLQQAYVSAYFPVLKGLTVDAGKMATHIGLELLDSKDNIAYTIGYVFFNTIPFIHTGARA HHHHHHHHHHHHHHCCCEECCHHHHHHHCEEEECCCCCEEEEEEEHHHCCCCEEECCCEE NLQINDRLSTGLYLYNSAQGTGYTGNGQQFGYVGVTPYGDAAGGSSLTSTQQHAYADGPN EEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCC PTRAIGTQVKYDVVPDKFQVVWNTLQANDNIKGRQNNGLYYLEQASGTAFPKQSAFKTDN CHHHHCCEEEEECCCCHHEEHEEHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC WMIQNLILIFKPTDKLTTIFDYTYGERNGQTNTAAFGYEAGGITKTKLDAALPGLVPALP EEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEHHHHHHHCCCCHHCCC TELTAAGLTNDTNLSRENKIKRIYQTYQVQAKYQFTDFFALGFRFEYLDDKRYGGALVVN CHHHHCCCCCCCCCCHHHHHHHHHHHHEEEEEEEEEEEEEEEEEEEEECCCCCCCEEEEC PPLFAVTPADRYDLKFQDSIGARAVSNYGQIKTLTFTPTFDLTENLQVKVDLRRDWGPGQ CCEEEECCCCCCCEEECCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCC QFVDTSGRPASQQNGIIVGMVAKF HHHCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA