| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222163
Identifier: 183222163
GI number: 183222163
Start: 2902754
End: 2903902
Strand: Direct
Name: 183222163
Synonym: LEPBI_I2806
Alternate gene names: NA
Gene position: 2902754-2903902 (Clockwise)
Preceding gene: 183222161
Following gene: 183222164
Centisome position: 80.64
GC content: 31.85
Gene sequence:
>1149_bases GTGATCGGTGATCTTCAAATCCCCTTATTATTATCATTGGCAGCGCTTGTTTCTAATTTCTCAGTTTTACTTTTGACTTT GGGAAAAAACTTTCCAATCCTAATCACAATCCGATTTGTTTCCATTGTGTTAATTTTAGGAAATTCTTTTTTGATCGGTA CATTTTTATCTGGATCAGAGGGAGAGGCTTATGTATACTTTCACTTGTTCCGTTCAGTCATCTTTTTTATACCTTATCTT TTTTTAAAGGTAACATATAACTTAACAGCTAGAAAACAAAACTCTCGTTTGCTTCAAATTGCGCTCCTTTTGACTATATT CTATGTCCTCTTCATAAACATCGATTACCTTCGAAGCGAATCACTTCTAATCGCTGGATGGAATCGAAATCCTTGGGGCT TTTGGCCCATTTTACATCTAAGAGCCAAAATCTTCATTGGAATTGGTTTTTTTATACCTTTTCTGATTTCATTGTATTTA CTATTAAATCCCAAAGAAACCTTAGAGAAAGAAAATTTGAATTTCTCATTTTTATTGGTTGTTTGGTGGATCGGATTTTC TTGTAACTTTTTAGCATTGTTTGGAGTAAATGTTTTTCCTTTTGGAATGGCAATAGACACGATCATTAGCGTTTTGTTTT CCTTGCTATTGACAAGGTATTGGAGAAGCCACTTTTTTGTTCTAGCGATTGAATTCTTTTCTGTACTGAGTTGTACGATC CTTTGTTTTATTCTCATCCATTGGGCTATGGATTTTAATTTCTCTATCCGATACTTTGGTTCGTTTATAATAGGTATGGT ATTTGTATTTTTTTTATTCCATTTCTTTCAGTTTATGAAATCAAAAAATTCAAATCCTTTTCTTTGGAATAGGGATATTG ATTTAAAAAATGGAACTTTTCAATTTGAATTCGATACAACAAAATTAAAACAGAAACTCAACTACTATGATGTAACAAAA AAAGAAATTCAAATCGCAGAAATGATCACAAGAGGATTTTCTAAGAAACAAATTCGGTTTTATTTAGATATCACAGATGG CACTTTTCGGAATCATTTGAGCAACTTGTATGCAAAAACCATTGATTTGGAATCCCCACAAACGACAGGAGATAAATTCC AAAGATTGATTTATTTTTTAACCAAGTGA
Upstream 100 bases:
>100_bases ATTTTCAGCTTTGTCCAAAGAACATCAAGTAAGAATCTTTAGGTTTTTGATTTGATTTTGATCGCTGCTTGGTTGTATAA TTCCATCTGGAGTAATTCTT
Downstream 100 bases:
>100_bases TAGCAAACTCAAATTTTCATGACATTTGTCATGGGTTTTCGTTTGGTTCATGACAAAACGAGGATTCCCAATCGCTCTTT CAACGCGTATTATAAAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSFLIGTFLSGSEGEAYVYFHLFRSVIFFIPYL FLKVTYNLTARKQNSRLLQIALLLTIFYVLFINIDYLRSESLLIAGWNRNPWGFWPILHLRAKIFIGIGFFIPFLISLYL LLNPKETLEKENLNFSFLLVVWWIGFSCNFLALFGVNVFPFGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTI LCFILIHWAMDFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTFQFEFDTTKLKQKLNYYDVTK KEIQIAEMITRGFSKKQIRFYLDITDGTFRNHLSNLYAKTIDLESPQTTGDKFQRLIYFLTK
Sequences:
>Translated_382_residues MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSFLIGTFLSGSEGEAYVYFHLFRSVIFFIPYL FLKVTYNLTARKQNSRLLQIALLLTIFYVLFINIDYLRSESLLIAGWNRNPWGFWPILHLRAKIFIGIGFFIPFLISLYL LLNPKETLEKENLNFSFLLVVWWIGFSCNFLALFGVNVFPFGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTI LCFILIHWAMDFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTFQFEFDTTKLKQKLNYYDVTK KEIQIAEMITRGFSKKQIRFYLDITDGTFRNHLSNLYAKTIDLESPQTTGDKFQRLIYFLTK >Mature_382_residues MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSFLIGTFLSGSEGEAYVYFHLFRSVIFFIPYL FLKVTYNLTARKQNSRLLQIALLLTIFYVLFINIDYLRSESLLIAGWNRNPWGFWPILHLRAKIFIGIGFFIPFLISLYL LLNPKETLEKENLNFSFLLVVWWIGFSCNFLALFGVNVFPFGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTI LCFILIHWAMDFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTFQFEFDTTKLKQKLNYYDVTK KEIQIAEMITRGFSKKQIRFYLDITDGTFRNHLSNLYAKTIDLESPQTTGDKFQRLIYFLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44795; Mature: 44795
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSFLIGTFLSGSE CCCCCHHHHHHHHHHHHCCHHEEEEEECCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCC GEAYVYFHLFRSVIFFIPYLFLKVTYNLTARKQNSRLLQIALLLTIFYVLFINIDYLRSE CCEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SLLIAGWNRNPWGFWPILHLRAKIFIGIGFFIPFLISLYLLLNPKETLEKENLNFSFLLV CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHH VWWIGFSCNFLALFGVNVFPFGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTI HHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCFILIHWAMDFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCEE QFEFDTTKLKQKLNYYDVTKKEIQIAEMITRGFSKKQIRFYLDITDGTFRNHLSNLYAKT EEEECHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHH IDLESPQTTGDKFQRLIYFLTK CCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIGDLQIPLLLSLAALVSNFSVLLLTLGKNFPILITIRFVSIVLILGNSFLIGTFLSGSE CCCCCHHHHHHHHHHHHCCHHEEEEEECCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCC GEAYVYFHLFRSVIFFIPYLFLKVTYNLTARKQNSRLLQIALLLTIFYVLFINIDYLRSE CCEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SLLIAGWNRNPWGFWPILHLRAKIFIGIGFFIPFLISLYLLLNPKETLEKENLNFSFLLV CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHH VWWIGFSCNFLALFGVNVFPFGMAIDTIISVLFSLLLTRYWRSHFFVLAIEFFSVLSCTI HHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCFILIHWAMDFNFSIRYFGSFIIGMVFVFFLFHFFQFMKSKNSNPFLWNRDIDLKNGTF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCEE QFEFDTTKLKQKLNYYDVTKKEIQIAEMITRGFSKKQIRFYLDITDGTFRNHLSNLYAKT EEEECHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHH IDLESPQTTGDKFQRLIYFLTK CCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA