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The map label for this gene is ydcU [H]

Identifier: 183222010

GI number: 183222010

Start: 2746978

End: 2747895

Strand: Reverse

Name: ydcU [H]

Synonym: LEPBI_I2651

Alternate gene names: 183222010

Gene position: 2747895-2746978 (Counterclockwise)

Preceding gene: 183222011

Following gene: 183222009

Centisome position: 76.34

GC content: 40.52

Gene sequence:

>918_bases
ATGACGAGTACCTTTGATAAGTTTTTTACCTTTTTGTTTTACAGAAAGAGTTTGGCTCTCTTTCTATTACTAGCCCCACT
TCTCATTTGGCTTGGAGTGGTTTACCTTGGATCTTTATTTACTCTCCTCATCCAAAGTTTTTTTTCAGTCGATTCGTTCT
CTGGAGTCATCAAAAGAGAGTTCACTCTGGAATCGTATTATGATCTGTTTCGGCAAAGCACCAATTGGGACATCATCATT
CGAACTTCCACCATGGCTTTTACCGTCACAGTTGTGAGTGCCATCATTGCTTTCCCAATTGCTTATTATATGGCAATGAA
TGCAGGTCCTAAGTTAAAACCCATTTTGTATTTGGGTGTGATGTTACCACTCTGGTCCAGTTATTTGGTAAAAGTTTATT
CCTGGAAACTCATTATGGCTAAAGAAGGAATCCTTACTTGGTGTTTGGAAAGGCTTGGACTTATGAATGTGTTAGACGCT
ATTCTTGCTCTCCCTGTCATCGGAGGAAGTTCTTTGTCATTTTCTTATCTCGGTATGTTTCTTGTATTTGTATACATTTG
GCTTCCGTATATGATTTTGCCCATCCAGGCTTCTCTCGAAAGGATCCCCAAATCGTTGTTAGAAGCATCTTCTGACTTAG
GGGGAGGCCCTTCACAAACCTTTCGTAAGGTGATATTACCATTAGCCTTCCCAGGGGTAGTGGCAGGATCCATTTTCACT
TTTTCTTTAAGTTTAGGTGATTATATCATTCCGACCATCATTGGGAATTCGAGTTATTTCATTGGAATGGCAGTTTACAC
CCACCAAGGAACAGCCGGAAACATCCCACTGGCTGCAGCTTTTTCCGTTGTCCCGATCATCATCATGATGATTTATTTAT
CGATTGCAAAACGATTAGGAGCTTTTGATGCGCTCTAA

Upstream 100 bases:

>100_bases
ACTCAAAATTTAAAAATTTCAGCTGATCATATAGCTGTTGGATCGGAAGTACTTGTGGGTTGGAAAGATTCCGACATGCA
CCTGTTATAAGGGAATCAAA

Downstream 100 bases:

>100_bases
ATGGAACTTAGGATCAATCGGTTTAAAAACGGCGACACTCTTCGGTTTTTTATTCATCCACATCCCTATCCTCATCATCA
TCATGTATGCATTTTCCACT

Product: putative sperimidine/putrescine transport protein PotH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTSTFDKFFTFLFYRKSLALFLLLAPLLIWLGVVYLGSLFTLLIQSFFSVDSFSGVIKREFTLESYYDLFRQSTNWDIII
RTSTMAFTVTVVSAIIAFPIAYYMAMNAGPKLKPILYLGVMLPLWSSYLVKVYSWKLIMAKEGILTWCLERLGLMNVLDA
ILALPVIGGSSLSFSYLGMFLVFVYIWLPYMILPIQASLERIPKSLLEASSDLGGGPSQTFRKVILPLAFPGVVAGSIFT
FSLSLGDYIIPTIIGNSSYFIGMAVYTHQGTAGNIPLAAAFSVVPIIIMMIYLSIAKRLGAFDAL

Sequences:

>Translated_305_residues
MTSTFDKFFTFLFYRKSLALFLLLAPLLIWLGVVYLGSLFTLLIQSFFSVDSFSGVIKREFTLESYYDLFRQSTNWDIII
RTSTMAFTVTVVSAIIAFPIAYYMAMNAGPKLKPILYLGVMLPLWSSYLVKVYSWKLIMAKEGILTWCLERLGLMNVLDA
ILALPVIGGSSLSFSYLGMFLVFVYIWLPYMILPIQASLERIPKSLLEASSDLGGGPSQTFRKVILPLAFPGVVAGSIFT
FSLSLGDYIIPTIIGNSSYFIGMAVYTHQGTAGNIPLAAAFSVVPIIIMMIYLSIAKRLGAFDAL
>Mature_304_residues
TSTFDKFFTFLFYRKSLALFLLLAPLLIWLGVVYLGSLFTLLIQSFFSVDSFSGVIKREFTLESYYDLFRQSTNWDIIIR
TSTMAFTVTVVSAIIAFPIAYYMAMNAGPKLKPILYLGVMLPLWSSYLVKVYSWKLIMAKEGILTWCLERLGLMNVLDAI
LALPVIGGSSLSFSYLGMFLVFVYIWLPYMILPIQASLERIPKSLLEASSDLGGGPSQTFRKVILPLAFPGVVAGSIFTF
SLSLGDYIIPTIIGNSSYFIGMAVYTHQGTAGNIPLAAAFSVVPIIIMMIYLSIAKRLGAFDAL

Specific function: Probably part of the binding-protein-dependent transport system ydcSTUV; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787713, Length=277, Percent_Identity=57.4007220216607, Blast_Score=327, Evalue=6e-91,
Organism=Escherichia coli, GI1787080, Length=239, Percent_Identity=29.7071129707113, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787369, Length=254, Percent_Identity=28.740157480315, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33875; Mature: 33744

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTFDKFFTFLFYRKSLALFLLLAPLLIWLGVVYLGSLFTLLIQSFFSVDSFSGVIKRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTLESYYDLFRQSTNWDIIIRTSTMAFTVTVVSAIIAFPIAYYMAMNAGPKLKPILYLGV
HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
MLPLWSSYLVKVYSWKLIMAKEGILTWCLERLGLMNVLDAILALPVIGGSSLSFSYLGMF
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVFVYIWLPYMILPIQASLERIPKSLLEASSDLGGGPSQTFRKVILPLAFPGVVAGSIFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE
FSLSLGDYIIPTIIGNSSYFIGMAVYTHQGTAGNIPLAAAFSVVPIIIMMIYLSIAKRLG
EEECCCCEEHHHEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFDAL
HCCCC
>Mature Secondary Structure 
TSTFDKFFTFLFYRKSLALFLLLAPLLIWLGVVYLGSLFTLLIQSFFSVDSFSGVIKRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTLESYYDLFRQSTNWDIIIRTSTMAFTVTVVSAIIAFPIAYYMAMNAGPKLKPILYLGV
HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
MLPLWSSYLVKVYSWKLIMAKEGILTWCLERLGLMNVLDAILALPVIGGSSLSFSYLGMF
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LVFVYIWLPYMILPIQASLERIPKSLLEASSDLGGGPSQTFRKVILPLAFPGVVAGSIFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE
FSLSLGDYIIPTIIGNSSYFIGMAVYTHQGTAGNIPLAAAFSVVPIIIMMIYLSIAKRLG
EEECCCCEEHHHEECCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFDAL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]