| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is msrA2 [H]
Identifier: 183221992
GI number: 183221992
Start: 2724376
End: 2725059
Strand: Direct
Name: msrA2 [H]
Synonym: LEPBI_I2633
Alternate gene names: 183221992
Gene position: 2724376-2725059 (Clockwise)
Preceding gene: 183221991
Following gene: 183221995
Centisome position: 75.68
GC content: 37.57
Gene sequence:
>684_bases ATGATCGGTTTGGATTGTCTGTTCGGCAAAAAATTAGTTCCTTTGGCCATTTTCGGTTTGGCCTTTGTCCTCTTCCCATT TTGTGGACCTGTCACCCAAATTTCGAAACAAGAATCCTTACCTCTCGTTCCAAAATCAGGGCAAAAAATAGCCGTGTTTG CAGAAGGTTGTTTTTGGTGTTCAGAACATATCTTTGAATCCATTCCGGGTGTGATAGATGTTGTGTCTGGATATGCAGGT GGGCATACGGAAAATCCAACGTATGAATCAGTCAATACGGAAATGACAGGACATGCAGAATCAGTTTATATTGTTTATGA TCCAACTAAAATAAGTTATGCGGAACTCTGCAGAATCTTTTTTCTTTCGCATGATCCAACCACAAAAGACAGACAAGGAC CTGACATTGGTTCTTCGTATCGTTCGATTTTGTTTTATGCAGATGAAGAGGAATTCAAAATTGCAAATACAATCAAAAAA GAAATCCAAACACAAAACATTTGGAATGGAACGATTGTGACCGAATTCCAAAAATTAAAACATTTTTACAAAGCGGAAGG ATACCACCAGGATTTTATCAAAAACAATCCGTCTCAATCCTACGTCTTAGCAGTTTCTATTCCGAGATTCAAAGAGTTTC AAAATCGTTACAATGAATTTAAAACGCGGAAAACTGTTCCTTAA
Upstream 100 bases:
>100_bases GACGTCCAAACGAAAAGGACGTCACCCCTCCCTAAACTCGGACGATTCCTCAAACTAGTAGAAATTCTAACCAAATCCGT ACGGGAACAATCTAATTGGT
Downstream 100 bases:
>100_bases TTTTTGTTCTAAAAGAATCGAATTCAGCCTTAGATTGAAATTTACAAACTTTCAAAATTTCCATCGGGATTTCAGAAGAT TTTGCTTCTTTTGAATTGAT
Product: peptide methionine sulfoxide reductase MsrA
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MIGLDCLFGKKLVPLAIFGLAFVLFPFCGPVTQISKQESLPLVPKSGQKIAVFAEGCFWCSEHIFESIPGVIDVVSGYAG GHTENPTYESVNTEMTGHAESVYIVYDPTKISYAELCRIFFLSHDPTTKDRQGPDIGSSYRSILFYADEEEFKIANTIKK EIQTQNIWNGTIVTEFQKLKHFYKAEGYHQDFIKNNPSQSYVLAVSIPRFKEFQNRYNEFKTRKTVP
Sequences:
>Translated_227_residues MIGLDCLFGKKLVPLAIFGLAFVLFPFCGPVTQISKQESLPLVPKSGQKIAVFAEGCFWCSEHIFESIPGVIDVVSGYAG GHTENPTYESVNTEMTGHAESVYIVYDPTKISYAELCRIFFLSHDPTTKDRQGPDIGSSYRSILFYADEEEFKIANTIKK EIQTQNIWNGTIVTEFQKLKHFYKAEGYHQDFIKNNPSQSYVLAVSIPRFKEFQNRYNEFKTRKTVP >Mature_227_residues MIGLDCLFGKKLVPLAIFGLAFVLFPFCGPVTQISKQESLPLVPKSGQKIAVFAEGCFWCSEHIFESIPGVIDVVSGYAG GHTENPTYESVNTEMTGHAESVYIVYDPTKISYAELCRIFFLSHDPTTKDRQGPDIGSSYRSILFYADEEEFKIANTIKK EIQTQNIWNGTIVTEFQKLKHFYKAEGYHQDFIKNNPSQSYVLAVSIPRFKEFQNRYNEFKTRKTVP
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=154, Percent_Identity=40.9090909090909, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI208609995, Length=154, Percent_Identity=40.9090909090909, Blast_Score=124, Evalue=5e-29, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=38.3177570093458, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1790665, Length=162, Percent_Identity=41.9753086419753, Blast_Score=127, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17533973, Length=142, Percent_Identity=31.6901408450704, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320881, Length=158, Percent_Identity=37.3417721518987, Blast_Score=101, Evalue=1e-22, Organism=Drosophila melanogaster, GI24664627, Length=145, Percent_Identity=37.2413793103448, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI45553131, Length=140, Percent_Identity=37.1428571428571, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24664631, Length=145, Percent_Identity=35.8620689655172, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 25793; Mature: 25793
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLDCLFGKKLVPLAIFGLAFVLFPFCGPVTQISKQESLPLVPKSGQKIAVFAEGCFWC CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEECCHHHH SEHIFESIPGVIDVVSGYAGGHTENPTYESVNTEMTGHAESVYIVYDPTKISYAELCRIF HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH FLSHDPTTKDRQGPDIGSSYRSILFYADEEEFKIANTIKKEIQTQNIWNGTIVTEFQKLK HCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HFYKAEGYHQDFIKNNPSQSYVLAVSIPRFKEFQNRYNEFKTRKTVP HHHHCCCCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIGLDCLFGKKLVPLAIFGLAFVLFPFCGPVTQISKQESLPLVPKSGQKIAVFAEGCFWC CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEEECCHHHH SEHIFESIPGVIDVVSGYAGGHTENPTYESVNTEMTGHAESVYIVYDPTKISYAELCRIF HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH FLSHDPTTKDRQGPDIGSSYRSILFYADEEEFKIANTIKKEIQTQNIWNGTIVTEFQKLK HCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HFYKAEGYHQDFIKNNPSQSYVLAVSIPRFKEFQNRYNEFKTRKTVP HHHHCCCCHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]