| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221985
Identifier: 183221985
GI number: 183221985
Start: 2718163
End: 2718996
Strand: Direct
Name: 183221985
Synonym: LEPBI_I2625
Alternate gene names: NA
Gene position: 2718163-2718996 (Clockwise)
Preceding gene: 183221984
Following gene: 183221986
Centisome position: 75.51
GC content: 36.81
Gene sequence:
>834_bases ATGAAACGGATTCCCTATTTATTGATTTTTCTTCTATTAACCCTCGAATCTTGTGTAATCTTCCAAGCGACAAAAGTTCC TTCCAATAACACCAAAAACACACTCGCAGGTGACGTTTCCAAATCCCCTAAGATTGTATTTTTGGGTGATAGTATTACCC ATGGCCGTGTGAGTTATGATTATGTGGAATCCATTCGTAATCATCCAAAACTGCAGAATGCGTTGGTGGTCAACGAAGGG ATCAATAGTCGTTTGACAGTTCAAATTTTAGAAGAGTTAGATTCCGTCATCCAGCTAAAGCCAGATTATGTATTTTTACT CATTGGGACCAATGACCTGAAGGCAACTTTATCTCAAGAGGAATATGATCGATACGCAAGTTTGTGGAAATTAAAAGATC CAGTGACGGAAGATAGTTTTGCTCGCAATTTGAATTTGATTATAGAACGAATTCAAAAAAACACAAAAGCTAAAATCATT GTATCATCCCCGCCCGTTTTAGGCGAAGATCCAAAATCTATTCCTTTTTTAAGATCAAAACGGTTTGCAGAGCTCACAAA AGACGTCTGCGCAAAACATAAAGTAAGTTACATACCTCTACATGAAACGTTAACCAAAGAATTGGAATTACTGCCGAATC TTCCCAAAAAAGCATACGTACAAAGTACTTGGAGTATGTATTGGACCATTTTGAAGTATTATTCAACCACATCCTCATGG AATGATTTAGGAGAATCTAACGGATATTACTTTTTGACAGATGCCATCCATCTGAATGAACGCGGCGGAAAAATCTTTGA ACAAATGATTTTAGAAACATTATTGTCTCCTTAA
Upstream 100 bases:
>100_bases CAATTCAATGTTTGGTCTTTTTTGTTTTCTCCAATAAAATACACGAACTTAAAAAAAATTATTCTTTTTAAAAACCAAAG TTTCCGTTAGAATTCAACTC
Downstream 100 bases:
>100_bases ACCATTGATGGTCACGAGGAATCCTTTTCTATCGTTCCACTTGGATTCCTTCGGGAATCCCTATCAAATGCCAATATCAC ATTCATAAAATTGAATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKRIPYLLIFLLLTLESCVIFQATKVPSNNTKNTLAGDVSKSPKIVFLGDSITHGRVSYDYVESIRNHPKLQNALVVNEG INSRLTVQILEELDSVIQLKPDYVFLLIGTNDLKATLSQEEYDRYASLWKLKDPVTEDSFARNLNLIIERIQKNTKAKII VSSPPVLGEDPKSIPFLRSKRFAELTKDVCAKHKVSYIPLHETLTKELELLPNLPKKAYVQSTWSMYWTILKYYSTTSSW NDLGESNGYYFLTDAIHLNERGGKIFEQMILETLLSP
Sequences:
>Translated_277_residues MKRIPYLLIFLLLTLESCVIFQATKVPSNNTKNTLAGDVSKSPKIVFLGDSITHGRVSYDYVESIRNHPKLQNALVVNEG INSRLTVQILEELDSVIQLKPDYVFLLIGTNDLKATLSQEEYDRYASLWKLKDPVTEDSFARNLNLIIERIQKNTKAKII VSSPPVLGEDPKSIPFLRSKRFAELTKDVCAKHKVSYIPLHETLTKELELLPNLPKKAYVQSTWSMYWTILKYYSTTSSW NDLGESNGYYFLTDAIHLNERGGKIFEQMILETLLSP >Mature_277_residues MKRIPYLLIFLLLTLESCVIFQATKVPSNNTKNTLAGDVSKSPKIVFLGDSITHGRVSYDYVESIRNHPKLQNALVVNEG INSRLTVQILEELDSVIQLKPDYVFLLIGTNDLKATLSQEEYDRYASLWKLKDPVTEDSFARNLNLIIERIQKNTKAKII VSSPPVLGEDPKSIPFLRSKRFAELTKDVCAKHKVSYIPLHETLTKELELLPNLPKKAYVQSTWSMYWTILKYYSTTSSW NDLGESNGYYFLTDAIHLNERGGKIFEQMILETLLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31646; Mature: 31646
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIPYLLIFLLLTLESCVIFQATKVPSNNTKNTLAGDVSKSPKIVFLGDSITHGRVSYD CCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHH YVESIRNHPKLQNALVVNEGINSRLTVQILEELDSVIQLKPDYVFLLIGTNDLKATLSQE HHHHHHCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHCHH EYDRYASLWKLKDPVTEDSFARNLNLIIERIQKNTKAKIIVSSPPVLGEDPKSIPFLRSK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHH RFAELTKDVCAKHKVSYIPLHETLTKELELLPNLPKKAYVQSTWSMYWTILKYYSTTSSW HHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH NDLGESNGYYFLTDAIHLNERGGKIFEQMILETLLSP HHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKRIPYLLIFLLLTLESCVIFQATKVPSNNTKNTLAGDVSKSPKIVFLGDSITHGRVSYD CCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHH YVESIRNHPKLQNALVVNEGINSRLTVQILEELDSVIQLKPDYVFLLIGTNDLKATLSQE HHHHHHCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHCHH EYDRYASLWKLKDPVTEDSFARNLNLIIERIQKNTKAKIIVSSPPVLGEDPKSIPFLRSK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHH RFAELTKDVCAKHKVSYIPLHETLTKELELLPNLPKKAYVQSTWSMYWTILKYYSTTSSW HHHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH NDLGESNGYYFLTDAIHLNERGGKIFEQMILETLLSP HHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA