| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221953
Identifier: 183221953
GI number: 183221953
Start: 2680381
End: 2681127
Strand: Reverse
Name: 183221953
Synonym: LEPBI_I2594
Alternate gene names: NA
Gene position: 2681127-2680381 (Counterclockwise)
Preceding gene: 183221954
Following gene: 183221952
Centisome position: 74.48
GC content: 36.95
Gene sequence:
>747_bases ATGGATAAGTTTCATAAAAAGAACATCATCGAACAAAAAAAACAAGCGGAACTCATCCAAAAGGATGAGTTCGCTGATTT TGAAGGTTCAAAGGCCGAACTCGCTTTTTTAAAGTTCACACATTTTTTAGCAAAGAATCGTAAGGCTGTTTTTATCAGTC TTACTTCCGCTATTATTGTGTTAGCTTGTGTGATTGGGTTTTTTGAATACAGACAATACTTGTTTGAAAAAGAGACCGTA ACTTTAGAAGACCTTAAACTCACTCACCAAAAAGCAAATGTAAGTTTGGATGCACAGATCCAAAGTTTGGAAGTATTTTT ACAGAACCAAAGTACGGGTCGAATGGAACTTCGAGTTTGGAAAGATCTTTCCAAACTGAATGCAGAAAAAGGTGATTTTG GAAAGGCCGCGACTTATTTAGAAGATGCTGCAAAAAAAATTGATACTCCGAAAGAAATCAAAGCACTTTATTTTTACATT GCGGGCAATTACCGCGAACGTGAAAAAAACAATGCCAAATCTTTGGAAAATTATAAAATTGCGGCATCAGTGATAGAACC TGCTCGTGAATTGAATGGGTTTAAAGCATGGTCGTACTACCAAGCAGGTCGATTGTCGTATCTCACAGGAGATAAATCTT CTGCGAAACAATACCTTGAAAAAGCAGTCAAACTTGATGGGGCAGAATCTGGGGAAGATGTAAAACTCCTTAGCAGTTAT TTACTCCTCAAACTCGGTAAAAACTAA
Upstream 100 bases:
>100_bases GTTGAGAGAGAAGAGATGGCAAAATACATGAAGGAAGACAACCAACCTTCACGTGAATCCATCGGATCTTTTATGAATTT AAACCAAAACCGATAGGTCT
Downstream 100 bases:
>100_bases CCTATGTTAACTTTGGCTCTTCCGAAAGGTAGGCTTGCCGAAGAAACAGCACTTCTTTTGTTATCCAAAGGGTGGCTTAA AAATTTGCCATCCGAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MDKFHKKNIIEQKKQAELIQKDEFADFEGSKAELAFLKFTHFLAKNRKAVFISLTSAIIVLACVIGFFEYRQYLFEKETV TLEDLKLTHQKANVSLDAQIQSLEVFLQNQSTGRMELRVWKDLSKLNAEKGDFGKAATYLEDAAKKIDTPKEIKALYFYI AGNYREREKNNAKSLENYKIAASVIEPARELNGFKAWSYYQAGRLSYLTGDKSSAKQYLEKAVKLDGAESGEDVKLLSSY LLLKLGKN
Sequences:
>Translated_248_residues MDKFHKKNIIEQKKQAELIQKDEFADFEGSKAELAFLKFTHFLAKNRKAVFISLTSAIIVLACVIGFFEYRQYLFEKETV TLEDLKLTHQKANVSLDAQIQSLEVFLQNQSTGRMELRVWKDLSKLNAEKGDFGKAATYLEDAAKKIDTPKEIKALYFYI AGNYREREKNNAKSLENYKIAASVIEPARELNGFKAWSYYQAGRLSYLTGDKSSAKQYLEKAVKLDGAESGEDVKLLSSY LLLKLGKN >Mature_248_residues MDKFHKKNIIEQKKQAELIQKDEFADFEGSKAELAFLKFTHFLAKNRKAVFISLTSAIIVLACVIGFFEYRQYLFEKETV TLEDLKLTHQKANVSLDAQIQSLEVFLQNQSTGRMELRVWKDLSKLNAEKGDFGKAATYLEDAAKKIDTPKEIKALYFYI AGNYREREKNNAKSLENYKIAASVIEPARELNGFKAWSYYQAGRLSYLTGDKSSAKQYLEKAVKLDGAESGEDVKLLSSY LLLKLGKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28311; Mature: 28311
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFHKKNIIEQKKQAELIQKDEFADFEGSKAELAFLKFTHFLAKNRKAVFISLTSAIIV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHH LACVIGFFEYRQYLFEKETVTLEDLKLTHQKANVSLDAQIQSLEVFLQNQSTGRMELRVW HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHH KDLSKLNAEKGDFGKAATYLEDAAKKIDTPKEIKALYFYIAGNYREREKNNAKSLENYKI HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHHCCHHHHHHHHH AASVIEPARELNGFKAWSYYQAGRLSYLTGDKSSAKQYLEKAVKLDGAESGEDVKLLSSY HHHHHHHHHHCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LLLKLGKN HHHHCCCC >Mature Secondary Structure MDKFHKKNIIEQKKQAELIQKDEFADFEGSKAELAFLKFTHFLAKNRKAVFISLTSAIIV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHH LACVIGFFEYRQYLFEKETVTLEDLKLTHQKANVSLDAQIQSLEVFLQNQSTGRMELRVW HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHH KDLSKLNAEKGDFGKAATYLEDAAKKIDTPKEIKALYFYIAGNYREREKNNAKSLENYKI HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHHCCHHHHHHHHH AASVIEPARELNGFKAWSYYQAGRLSYLTGDKSSAKQYLEKAVKLDGAESGEDVKLLSSY HHHHHHHHHHCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LLLKLGKN HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA