| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221897
Identifier: 183221897
GI number: 183221897
Start: 2623843
End: 2624871
Strand: Direct
Name: 183221897
Synonym: LEPBI_I2536
Alternate gene names: NA
Gene position: 2623843-2624871 (Clockwise)
Preceding gene: 183221892
Following gene: 183221898
Centisome position: 72.89
GC content: 38.1
Gene sequence:
>1029_bases ATGAAAAAATTCCTTTTGATTGCCATTATTTCCATCTGTACATTCCCTTTATTTGCAATCAACACAGTCATTTTAAAAAA CGGGAAAACGATTAAAGGAAAAGTAACAAACCAAAACGAAAAAGGTCTTACTGTTCAAACAAACGAAGGGAACCAGACCA TAACCAAATCACAAATCCTAAAAGTAATTTATAAAGATGTCAGTGACCAAGAAGCAGAAAAGATTAGAATCGCAGAAGAA AAAAAACTAAAAGAGAAAGAAGAGAAAGAAAAAGCCAAACTTGAAAAAGAAAGACTAATCGCAGAAGCCAAAGAACAAAA ACGTCTTGAAGAAGAAACAAAACTTGCTGAGAAAAAAAGATTAGAAGAAGAGAAATCAATAGAGACCCAAGCAGAAAAAG AAGCAAAAGCAGAGGCTGAATGGTTAGCGACTCGACAACTCGGACCATCACCTGCCTCAACCAAATGTGGAGGTCGTTTA GCATTAATTTGGCGATCAGCTGTTTTACCTGGCTGGGGGCAATACTGCGGTGGACAAACGACTTCCGCAGGAACCTTTGG TGTTTTATTTTTTGGCTCACTCTTTTATACTTTGGGCCCGCTTCGCACAGAAGAGAAAAATGCAAAAGCACATTACGATT CGATGGTTTTGTTGAACCAAATTGCAGGACCAAGTACCAGATTCAACGCACAGAACATAAGTTTGCCGATTGAGTTCGTT GGAGGTTTCATTGAAACTTCCATAGCAGAAGATCTCATCGTCAAAAGTAAAAATAATGCTAAAGAATCGAATGTGAAGTT TTTAGCAGGTCTCGGAACTGTAGGAATTATTTATATCACCAATGTTGTTCATGCCTACATAATCGGTAAGGATCGTTATC CAGAAAGACCTGTTGTCCAATCCGGTGGAAAACAATTCAAAGAAGGTTGGGATTTCGAATCCAGTTGGGACAGACCAACG ACTGTGACTTCCTATCGACCTCAGATGAATTCCATTTATGCTGAAGTTCGTTATTCATTTCTATTTTAA
Upstream 100 bases:
>100_bases ATAGACTGAATGCACGCTGACGTTGAAATAACCTGAAAATTCACTTGCAATTTCTTGAATGAATGTAAGAATTTCAGAAT TCCGATTAGGACTTTATTAT
Downstream 100 bases:
>100_bases GGAGTTTGTATGAACCGTATTGTTTTATTGATTTTACTTTCCATTTTGTCATTCCAATGCCGAATCTTCAAACCATCTAA CCTTGACCCTACGGAAGATT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKKFLLIAIISICTFPLFAINTVILKNGKTIKGKVTNQNEKGLTVQTNEGNQTITKSQILKVIYKDVSDQEAEKIRIAEE KKLKEKEEKEKAKLEKERLIAEAKEQKRLEEETKLAEKKRLEEEKSIETQAEKEAKAEAEWLATRQLGPSPASTKCGGRL ALIWRSAVLPGWGQYCGGQTTSAGTFGVLFFGSLFYTLGPLRTEEKNAKAHYDSMVLLNQIAGPSTRFNAQNISLPIEFV GGFIETSIAEDLIVKSKNNAKESNVKFLAGLGTVGIIYITNVVHAYIIGKDRYPERPVVQSGGKQFKEGWDFESSWDRPT TVTSYRPQMNSIYAEVRYSFLF
Sequences:
>Translated_342_residues MKKFLLIAIISICTFPLFAINTVILKNGKTIKGKVTNQNEKGLTVQTNEGNQTITKSQILKVIYKDVSDQEAEKIRIAEE KKLKEKEEKEKAKLEKERLIAEAKEQKRLEEETKLAEKKRLEEEKSIETQAEKEAKAEAEWLATRQLGPSPASTKCGGRL ALIWRSAVLPGWGQYCGGQTTSAGTFGVLFFGSLFYTLGPLRTEEKNAKAHYDSMVLLNQIAGPSTRFNAQNISLPIEFV GGFIETSIAEDLIVKSKNNAKESNVKFLAGLGTVGIIYITNVVHAYIIGKDRYPERPVVQSGGKQFKEGWDFESSWDRPT TVTSYRPQMNSIYAEVRYSFLF >Mature_342_residues MKKFLLIAIISICTFPLFAINTVILKNGKTIKGKVTNQNEKGLTVQTNEGNQTITKSQILKVIYKDVSDQEAEKIRIAEE KKLKEKEEKEKAKLEKERLIAEAKEQKRLEEETKLAEKKRLEEEKSIETQAEKEAKAEAEWLATRQLGPSPASTKCGGRL ALIWRSAVLPGWGQYCGGQTTSAGTFGVLFFGSLFYTLGPLRTEEKNAKAHYDSMVLLNQIAGPSTRFNAQNISLPIEFV GGFIETSIAEDLIVKSKNNAKESNVKFLAGLGTVGIIYITNVVHAYIIGKDRYPERPVVQSGGKQFKEGWDFESSWDRPT TVTSYRPQMNSIYAEVRYSFLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38388; Mature: 38388
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLLIAIISICTFPLFAINTVILKNGKTIKGKVTNQNEKGLTVQTNEGNQTITKSQIL CCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHH KVIYKDVSDQEAEKIRIAEEKKLKEKEEKEKAKLEKERLIAEAKEQKRLEEETKLAEKKR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEEKSIETQAEKEAKAEAEWLATRQLGPSPASTKCGGRLALIWRSAVLPGWGQYCGGQT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCCCHHHCCCCC TSAGTFGVLFFGSLFYTLGPLRTEEKNAKAHYDSMVLLNQIAGPSTRFNAQNISLPIEFV CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH GGFIETSIAEDLIVKSKNNAKESNVKFLAGLGTVGIIYITNVVHAYIIGKDRYPERPVVQ HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCCCCHHH SGGKQFKEGWDFESSWDRPTTVTSYRPQMNSIYAEVRYSFLF CCCHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKFLLIAIISICTFPLFAINTVILKNGKTIKGKVTNQNEKGLTVQTNEGNQTITKSQIL CCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHH KVIYKDVSDQEAEKIRIAEEKKLKEKEEKEKAKLEKERLIAEAKEQKRLEEETKLAEKKR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEEEKSIETQAEKEAKAEAEWLATRQLGPSPASTKCGGRLALIWRSAVLPGWGQYCGGQT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHCCCCCHHHCCCCC TSAGTFGVLFFGSLFYTLGPLRTEEKNAKAHYDSMVLLNQIAGPSTRFNAQNISLPIEFV CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH GGFIETSIAEDLIVKSKNNAKESNVKFLAGLGTVGIIYITNVVHAYIIGKDRYPERPVVQ HHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCCCCHHH SGGKQFKEGWDFESSWDRPTTVTSYRPQMNSIYAEVRYSFLF CCCHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA