| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221891
Identifier: 183221891
GI number: 183221891
Start: 2613320
End: 2615269
Strand: Direct
Name: 183221891
Synonym: LEPBI_I2527
Alternate gene names: NA
Gene position: 2613320-2615269 (Clockwise)
Preceding gene: 183221890
Following gene: 183221892
Centisome position: 72.6
GC content: 32.82
Gene sequence:
>1950_bases ATGAAAGGGAATGTATGGGCCTTTCTACTCGGAGTTTGTTTATTTCTCAGTTTTTGTAAAGAAAGCACTACATTAAAGTC GGATCAAATTCCAATTCAAAATCAAGCCTACATTGACTTATCTAAAATACCGAATTTTGAAATTCATTCTGTGGAAGGAT ATTGGGAATTTTATTGGATGTCACTCCTTGGACCAACATTCTCCTCACCTAAAAGCGATTTTTCAGATGAGGTGAGAATA CCAACAAACTTTCGTTATCCAGAGAAAAATCCAGATTTGATTGTGAATCAGTTTCGCCCTTGGACAAAATTCAACACTGG AAAAAATCAATTTTCTCCTTATGGATATGCTACCTACAGAACAATCATAAAAGTTCCCGAGAAGAATATGTATCTTTCCA TTTTTTATCCTCACCTATTTAGTTCGTCGAGGATTTGGATCAACGGAACTGAGATGGCCCACGTAGGATTTGTATCCGAA GATTTAGACAAAATAAAGTCTTCTCGGAAAGATACAAGGTTTAGTTTTTATTCTAATTCAGAATTTATTGAAATTGTTTT GCAAATTGCAAATGTCAGTTCCGTCCAAGGGGGACCACGCGGAAAGTTCCTCATTGGAACAAATGAAGGAATCAACAAAC ACTATATCAAAAATGTAATTTTTGACGCTGTCATCTTTGGATTGATATTTGGATCCATGATTTATCACTTTTTTATCTAT TTACTAAACAGAGACAATAAACCATTTATTTTCTTTTCTTTTGTATGTTTTACTTTTTTGCTTCGGTTGCCTTTTCACAA CACTAAACTTTATGAATTTTTTATTTCGGAGATTGATTGGGATACACAAAGACTTTTCCTTCATTTCGTGAATGTAATAT CTTTACTTTCCGTCATGTATTTTCTTAACAGTCTCTTCCCAAAACGAATCAGTCCCTATCTTTTTTTATTTTTTTGGTTA GGTGCGATTGTTTCAACATTAATCGCATTGATAAGTCCAAAATTATTAGCTATCGCAAATATCTATTATGCGGTAATTTA TTTACCCATCTTTATCATACAAGCTACGTACTTTGTGTTTTTTAAACTGCCGGAGAGAAGATCCTTTTTTCTTATGGCGA TCAGCTTGCTTGGTCTTGGATCTTTTTGTCTGTTCGCAATTATCTTAAATTTGTTTGGAATTGAAGGTGGAATTTTTCTC ATTATTGGTTTTCTATTGTTTGTTCTTTTTCAAGCACTTGCACTGAGCCGATTTTTTACTATTGCCTTGGAAAATCGTTC TAAACTTAAATTAGAATTATTGCAGGAAAAACAAAAGGCTCTTTCACAACAAAGAGAAGAATTGCAGCTCCTAATGCATG ATAGTTTAGGTAGTGAATTGACAGACGTTCATGTATATTTAGAAAATCATTTGGAACTAAAAGAACAACAGTTGCCAAAA AATTTTATCAATGGTATCTACAATCGAACCAGTCAAATGATTCGTTCCCTACGAAATCATTTACTTTTTATTGAAGATCT GAATTTGACATATACGAATCTTTTTGTGGGATTAAATATAACAATACTGAGGCGATATTCGGACGTTGGACGTGAAGTAG AGTTTAACATTCCTGAGTTTTTGCTTGGTAATATTTTTCAGGAAAAAATTAATTCGATCCAAGGGGATTTACCGATAAAT TTGTTTTATCTTTTCAATGAAATCTGCACCAATGATTTAAAATATGGAATCAATGAATCGAATTGGACGATTTCATATTT GGAATCTACAATTTCAATCTCACAAACGAATCAATCAAAAATAAATCATACCAACTTAAATATTCTACCAAAGGCAGCCA AGTTAAGGGTCAATAAGCTCAATGGTAAAATCAGTGCTTTCATCCAAGATGGTTTTTTTCATTTGAATATTGAGTTACCC TTTCCGTTTGTTGAGAAGTTTCAAACCTAA
Upstream 100 bases:
>100_bases GCGAACATACTGTCCACGGGTATGTAAAATCAATCTATAAAAAACTTATGGTACACAACCGAGTAGAGCTCACACTCAAA GCACAAAAGCTTTCCCTTCT
Downstream 100 bases:
>100_bases TGGCAATCCAACTACCGTAAGTTGTAATTTATATTTGTAGGTGGTATCATTTGTTCATTTTTCCAAGGCACTTTCTGTGA ACACCAGTAGAATATTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Kinase; 7TM Domain Sensor Diguanylate Cyclase; Integral Membrane Sensor Hybrid Histidine Kinase; Sensor Histidine Kinase; Serine Phosphatase RsbU; Sensor Diguanylate Cyclase; Signal Peptide; Two-Component Sensor Histidine Kinase; Phosphoserine Phosphatase; Regulatory Protein; Response Regulator Receiver; Adenylate Or Guanylate Cyclase; Histidine Kinase Sensor Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Signal Transduction Histidine Kinase; Adenylate Cyclase Family Protein; Response Regulator Receiver Protein; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MKGNVWAFLLGVCLFLSFCKESTTLKSDQIPIQNQAYIDLSKIPNFEIHSVEGYWEFYWMSLLGPTFSSPKSDFSDEVRI PTNFRYPEKNPDLIVNQFRPWTKFNTGKNQFSPYGYATYRTIIKVPEKNMYLSIFYPHLFSSSRIWINGTEMAHVGFVSE DLDKIKSSRKDTRFSFYSNSEFIEIVLQIANVSSVQGGPRGKFLIGTNEGINKHYIKNVIFDAVIFGLIFGSMIYHFFIY LLNRDNKPFIFFSFVCFTFLLRLPFHNTKLYEFFISEIDWDTQRLFLHFVNVISLLSVMYFLNSLFPKRISPYLFLFFWL GAIVSTLIALISPKLLAIANIYYAVIYLPIFIIQATYFVFFKLPERRSFFLMAISLLGLGSFCLFAIILNLFGIEGGIFL IIGFLLFVLFQALALSRFFTIALENRSKLKLELLQEKQKALSQQREELQLLMHDSLGSELTDVHVYLENHLELKEQQLPK NFINGIYNRTSQMIRSLRNHLLFIEDLNLTYTNLFVGLNITILRRYSDVGREVEFNIPEFLLGNIFQEKINSIQGDLPIN LFYLFNEICTNDLKYGINESNWTISYLESTISISQTNQSKINHTNLNILPKAAKLRVNKLNGKISAFIQDGFFHLNIELP FPFVEKFQT
Sequences:
>Translated_649_residues MKGNVWAFLLGVCLFLSFCKESTTLKSDQIPIQNQAYIDLSKIPNFEIHSVEGYWEFYWMSLLGPTFSSPKSDFSDEVRI PTNFRYPEKNPDLIVNQFRPWTKFNTGKNQFSPYGYATYRTIIKVPEKNMYLSIFYPHLFSSSRIWINGTEMAHVGFVSE DLDKIKSSRKDTRFSFYSNSEFIEIVLQIANVSSVQGGPRGKFLIGTNEGINKHYIKNVIFDAVIFGLIFGSMIYHFFIY LLNRDNKPFIFFSFVCFTFLLRLPFHNTKLYEFFISEIDWDTQRLFLHFVNVISLLSVMYFLNSLFPKRISPYLFLFFWL GAIVSTLIALISPKLLAIANIYYAVIYLPIFIIQATYFVFFKLPERRSFFLMAISLLGLGSFCLFAIILNLFGIEGGIFL IIGFLLFVLFQALALSRFFTIALENRSKLKLELLQEKQKALSQQREELQLLMHDSLGSELTDVHVYLENHLELKEQQLPK NFINGIYNRTSQMIRSLRNHLLFIEDLNLTYTNLFVGLNITILRRYSDVGREVEFNIPEFLLGNIFQEKINSIQGDLPIN LFYLFNEICTNDLKYGINESNWTISYLESTISISQTNQSKINHTNLNILPKAAKLRVNKLNGKISAFIQDGFFHLNIELP FPFVEKFQT >Mature_649_residues MKGNVWAFLLGVCLFLSFCKESTTLKSDQIPIQNQAYIDLSKIPNFEIHSVEGYWEFYWMSLLGPTFSSPKSDFSDEVRI PTNFRYPEKNPDLIVNQFRPWTKFNTGKNQFSPYGYATYRTIIKVPEKNMYLSIFYPHLFSSSRIWINGTEMAHVGFVSE DLDKIKSSRKDTRFSFYSNSEFIEIVLQIANVSSVQGGPRGKFLIGTNEGINKHYIKNVIFDAVIFGLIFGSMIYHFFIY LLNRDNKPFIFFSFVCFTFLLRLPFHNTKLYEFFISEIDWDTQRLFLHFVNVISLLSVMYFLNSLFPKRISPYLFLFFWL GAIVSTLIALISPKLLAIANIYYAVIYLPIFIIQATYFVFFKLPERRSFFLMAISLLGLGSFCLFAIILNLFGIEGGIFL IIGFLLFVLFQALALSRFFTIALENRSKLKLELLQEKQKALSQQREELQLLMHDSLGSELTDVHVYLENHLELKEQQLPK NFINGIYNRTSQMIRSLRNHLLFIEDLNLTYTNLFVGLNITILRRYSDVGREVEFNIPEFLLGNIFQEKINSIQGDLPIN LFYLFNEICTNDLKYGINESNWTISYLESTISISQTNQSKINHTNLNILPKAAKLRVNKLNGKISAFIQDGFFHLNIELP FPFVEKFQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75603; Mature: 75603
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGNVWAFLLGVCLFLSFCKESTTLKSDQIPIQNQAYIDLSKIPNFEIHSVEGYWEFYWM CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEECHHHHHHHH SLLGPTFSSPKSDFSDEVRIPTNFRYPEKNPDLIVNQFRPWTKFNTGKNQFSPYGYATYR HHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH TIIKVPEKNMYLSIFYPHLFSSSRIWINGTEMAHVGFVSEDLDKIKSSRKDTRFSFYSNS HHEECCCCCEEEEEEEHHHCCCCEEEEECCCEEEECCHHHHHHHHHCCCCCCEEEEECCC EFIEIVLQIANVSSVQGGPRGKFLIGTNEGINKHYIKNVIFDAVIFGLIFGSMIYHFFIY HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNRDNKPFIFFSFVCFTFLLRLPFHNTKLYEFFISEIDWDTQRLFLHFVNVISLLSVMY HHCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FLNSLFPKRISPYLFLFFWLGAIVSTLIALISPKLLAIANIYYAVIYLPIFIIQATYFVF HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHE FKLPERRSFFLMAISLLGLGSFCLFAIILNLFGIEGGIFLIIGFLLFVLFQALALSRFFT EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE IALENRSKLKLELLQEKQKALSQQREELQLLMHDSLGSELTDVHVYLENHLELKEQQLPK EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHCCH NFINGIYNRTSQMIRSLRNHLLFIEDLNLTYTNLFVGLNITILRRYSDVGREVEFNIPEF HHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEEECCCEEEEHHHHCCCEEECCCHHH LLGNIFQEKINSIQGDLPINLFYLFNEICTNDLKYGINESNWTISYLESTISISQTNQSK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHEEECCCCCC INHTNLNILPKAAKLRVNKLNGKISAFIQDGFFHLNIELPFPFVEKFQT CCCCCCEEECCHHHEEEECCCCEEEEEEECCEEEEEEECCCHHHHHCCC >Mature Secondary Structure MKGNVWAFLLGVCLFLSFCKESTTLKSDQIPIQNQAYIDLSKIPNFEIHSVEGYWEFYWM CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEECHHHHHHHH SLLGPTFSSPKSDFSDEVRIPTNFRYPEKNPDLIVNQFRPWTKFNTGKNQFSPYGYATYR HHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH TIIKVPEKNMYLSIFYPHLFSSSRIWINGTEMAHVGFVSEDLDKIKSSRKDTRFSFYSNS HHEECCCCCEEEEEEEHHHCCCCEEEEECCCEEEECCHHHHHHHHHCCCCCCEEEEECCC EFIEIVLQIANVSSVQGGPRGKFLIGTNEGINKHYIKNVIFDAVIFGLIFGSMIYHFFIY HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNRDNKPFIFFSFVCFTFLLRLPFHNTKLYEFFISEIDWDTQRLFLHFVNVISLLSVMY HHCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FLNSLFPKRISPYLFLFFWLGAIVSTLIALISPKLLAIANIYYAVIYLPIFIIQATYFVF HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHE FKLPERRSFFLMAISLLGLGSFCLFAIILNLFGIEGGIFLIIGFLLFVLFQALALSRFFT EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE IALENRSKLKLELLQEKQKALSQQREELQLLMHDSLGSELTDVHVYLENHLELKEQQLPK EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHCCH NFINGIYNRTSQMIRSLRNHLLFIEDLNLTYTNLFVGLNITILRRYSDVGREVEFNIPEF HHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEEECCCEEEEHHHHCCCEEECCCHHH LLGNIFQEKINSIQGDLPINLFYLFNEICTNDLKYGINESNWTISYLESTISISQTNQSK HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHEEECCCCCC INHTNLNILPKAAKLRVNKLNGKISAFIQDGFFHLNIELPFPFVEKFQT CCCCCCEEECCHHHEEEECCCCEEEEEEECCEEEEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA