| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221857
Identifier: 183221857
GI number: 183221857
Start: 2574136
End: 2575188
Strand: Direct
Name: 183221857
Synonym: LEPBI_I2490
Alternate gene names: NA
Gene position: 2574136-2575188 (Clockwise)
Preceding gene: 183221856
Following gene: 183221861
Centisome position: 71.51
GC content: 39.51
Gene sequence:
>1053_bases TTGCGGAGATACTGGGAGCCGAACATGACAAAGCGTATCCATAGATTCAATTCAATTCTTCTTTGTATTTGTCTCATCGC ATTTTGCGGATGTGAACGTGGTTGCATTCGTTCGGCAATAAAAGATAGGTTCCAAAAAAAAATGCGAGATTTACCCGCGC CTATCACCAATTCGGATCTATCCCAATCCATCACCACACCAGGAGATTATTTATTTTCCATTCTACACCAAGAAATTCCA CGATACTACAAAGTACATGTTCCCAAAACTTACACGGGAAAAGAAAGTGTTCCACTGCTCTTCGTCTTTCATGGAGGTGG TGGTGATATGGAGATTCAATCCAATGAAGAGTATTACCACCAAATTTCAAAATCAGAAGAAATCGGCAATATTGTCGTTT TTCCCAATGGTTACAGTGAATACAAATCAGGGAAAATAGCGACTTGGAATGCTGGTAATTGTTGTGGAGAGGCTAAAAAA CAAAACATCGATGATCTTGGTTTTGTTAAATCAATCTTAAAACACCTAAAACAAAAATTGAATGTTGATGAGAAAAGAAT TTTCTCCACTGGCATGTCAAATGGTGCTATGATGTCGTACCAACTTGCATGTTTTATGACGGAAGATTTTGCCGCGATAA CGGCAGTCGCAGGGACTGACAATACAATCGATTGTAAACCGCAAAAACCAATCTCCATTTTTCACATCCATGCAAAAAAT GATGACCGAGTTTTATTTTATGGTGGAGCCGGTTCAAGTTTTACGGATAGAACACTTGTGACTGATTTTGTCTCTGTTAA TAAGAGCATTTCTAAATGGGTGCAGTTCAACGGCTGTCAAACAGTTCCAAAAATTGTATTGAAGAACCAAGGAGCTCAGT GTGAAGAATATTCAGGTTGTAAAGATGGGGTTAAAGTGAAACTTTGTGTCACAGAAGATGGAGGTCATTCTTGGCCAGGT GGGAAAAAACCCTCCATTCTGTTAGGTGGAGGGCCGCCTTCAAAAGCCATCTCTGCAAATGAAGAGATGTGGGATTTTTT CAAATCCCTATAA
Upstream 100 bases:
>100_bases AAATTTTAGTATCTTCGACTTAAGTTCCATTTGAACGATTGATTTATTTTTTTTTAAGTTTCAATTTTTATCGAATCATA TACTCTCAATTTCTAAATCG
Downstream 100 bases:
>100_bases CCGAAATCATTTACTTTTCAGTTAAGTAACTCCAAGGAGTCTCTGCAAAAGATTTTTTGGCATCTTCATTGAATTCTTTG ATGGTTTCTTCATCTTTTTT
Product: putative lipoprotein
Products: NA
Alternate protein names: Phospholipase/Carboxylesterase; Polyhydroxybutyrate Depolymerase; Lipoprotein; Esterase; Lipoprotein LpqP; Esterase/Lipase/Thioesterase; Secreted Protein; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Esterase Lipoprotein; Hydrolase; Feruloyl Esterase; Poly(3-Hydroxybutyrate) Depolymerase; Ricin And Poly(3-Hydroxybutyrate) Depolymerase Fusion; Poly(3-Hydroxyalkanoate) Depolymerase; Carbohydrate Esterase Family 1 Protein; Alpha/Beta Family Hydrolase; LOW QUALITY PROTEIN Esterase Lipoprotein LpqC; Poly(3-Hydroxybutyrate) Depolymerase-Like
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRRYWEPNMTKRIHRFNSILLCICLIAFCGCERGCIRSAIKDRFQKKMRDLPAPITNSDLSQSITTPGDYLFSILHQEIP RYYKVHVPKTYTGKESVPLLFVFHGGGGDMEIQSNEEYYHQISKSEEIGNIVVFPNGYSEYKSGKIATWNAGNCCGEAKK QNIDDLGFVKSILKHLKQKLNVDEKRIFSTGMSNGAMMSYQLACFMTEDFAAITAVAGTDNTIDCKPQKPISIFHIHAKN DDRVLFYGGAGSSFTDRTLVTDFVSVNKSISKWVQFNGCQTVPKIVLKNQGAQCEEYSGCKDGVKVKLCVTEDGGHSWPG GKKPSILLGGGPPSKAISANEEMWDFFKSL
Sequences:
>Translated_350_residues MRRYWEPNMTKRIHRFNSILLCICLIAFCGCERGCIRSAIKDRFQKKMRDLPAPITNSDLSQSITTPGDYLFSILHQEIP RYYKVHVPKTYTGKESVPLLFVFHGGGGDMEIQSNEEYYHQISKSEEIGNIVVFPNGYSEYKSGKIATWNAGNCCGEAKK QNIDDLGFVKSILKHLKQKLNVDEKRIFSTGMSNGAMMSYQLACFMTEDFAAITAVAGTDNTIDCKPQKPISIFHIHAKN DDRVLFYGGAGSSFTDRTLVTDFVSVNKSISKWVQFNGCQTVPKIVLKNQGAQCEEYSGCKDGVKVKLCVTEDGGHSWPG GKKPSILLGGGPPSKAISANEEMWDFFKSL >Mature_350_residues MRRYWEPNMTKRIHRFNSILLCICLIAFCGCERGCIRSAIKDRFQKKMRDLPAPITNSDLSQSITTPGDYLFSILHQEIP RYYKVHVPKTYTGKESVPLLFVFHGGGGDMEIQSNEEYYHQISKSEEIGNIVVFPNGYSEYKSGKIATWNAGNCCGEAKK QNIDDLGFVKSILKHLKQKLNVDEKRIFSTGMSNGAMMSYQLACFMTEDFAAITAVAGTDNTIDCKPQKPISIFHIHAKN DDRVLFYGGAGSSFTDRTLVTDFVSVNKSISKWVQFNGCQTVPKIVLKNQGAQCEEYSGCKDGVKVKLCVTEDGGHSWPG GKKPSILLGGGPPSKAISANEEMWDFFKSL
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39067; Mature: 39067
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRYWEPNMTKRIHRFNSILLCICLIAFCGCERGCIRSAIKDRFQKKMRDLPAPITNSDL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH SQSITTPGDYLFSILHQEIPRYYKVHVPKTYTGKESVPLLFVFHGGGGDMEIQSNEEYYH HHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHH QISKSEEIGNIVVFPNGYSEYKSGKIATWNAGNCCGEAKKQNIDDLGFVKSILKHLKQKL HHHCCCCCCCEEEECCCHHHHCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC NVDEKRIFSTGMSNGAMMSYQLACFMTEDFAAITAVAGTDNTIDCKPQKPISIFHIHAKN CCCHHHHHHCCCCCCCEEEEEEEEEEECCHHEEEEECCCCCEEECCCCCCEEEEEEEECC DDRVLFYGGAGSSFTDRTLVTDFVSVNKSISKWVQFNGCQTVPKIVLKNQGAQCEEYSGC CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHCCC KDGVKVKLCVTEDGGHSWPGGKKPSILLGGGPPSKAISANEEMWDFFKSL CCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MRRYWEPNMTKRIHRFNSILLCICLIAFCGCERGCIRSAIKDRFQKKMRDLPAPITNSDL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH SQSITTPGDYLFSILHQEIPRYYKVHVPKTYTGKESVPLLFVFHGGGGDMEIQSNEEYYH HHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHH QISKSEEIGNIVVFPNGYSEYKSGKIATWNAGNCCGEAKKQNIDDLGFVKSILKHLKQKL HHHCCCCCCCEEEECCCHHHHCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC NVDEKRIFSTGMSNGAMMSYQLACFMTEDFAAITAVAGTDNTIDCKPQKPISIFHIHAKN CCCHHHHHHCCCCCCCEEEEEEEEEEECCHHEEEEECCCCCEEECCCCCCEEEEEEEECC DDRVLFYGGAGSSFTDRTLVTDFVSVNKSISKWVQFNGCQTVPKIVLKNQGAQCEEYSGC CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHCCC KDGVKVKLCVTEDGGHSWPGGKKPSILLGGGPPSKAISANEEMWDFFKSL CCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA