Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is yhbW [H]

Identifier: 183221856

GI number: 183221856

Start: 2573054

End: 2574058

Strand: Direct

Name: yhbW [H]

Synonym: LEPBI_I2489

Alternate gene names: 183221856

Gene position: 2573054-2574058 (Clockwise)

Preceding gene: 183221853

Following gene: 183221857

Centisome position: 71.48

GC content: 39.1

Gene sequence:

>1005_bases
TTGTCCGTGGAACTTTCAATATTAGATTTAGTTTTTATCAACCAAGGTGAAACACCAAGAGATGCAATTCAAAATAGTGT
CCAGGTAGCGAAAGCCGCAGAATCTTTGGATTATAAAAGAATTTGGATCGCAGAACATCATAATTTTCCATCCATTGCAA
GTGCCGCAACATCAGTTGTGATCGGTCATATCGCATCTCATACCAACACCATTCGAGTCGGTGCAGGCGGGATCATGTTA
CCAAACCATTCACCTCTTGTCATCGCAGAACAATTCGGAACATTAGAAAGTTTATACCCGAATCGAATTGATTTAGGTTT
GGGAAGAGCACCAGGAACAGACCAACTCACCTTACGAGCATTACGTAGAGATGCAATGGCATCCCAACATTTCCCAGAAG
ATGTGAAAGAACTCATTGAATACTTATCTTCTGAAAAAGAAGAAGGAAAAGTAAATGCAATCCCAGGTTTTGGAACCAAT
GTACCTGTTTGGATTCTAGGTTCGAGTTTATTCGGTGCTCAACTTGCCGCTCTACTTGGATTACCATTTGCATTTGCTTC
TCATTTTGCTCCAACATATTTGAAGGATGCTGTTTCTATTTACAAAAAACAGTTTCGACCATCCGCACATTTAGAGAAAC
CTTACGTGATGATGGCAATGAATGTGATCGCCGCTGATTCAGATCCAGAAGCAGAATATTTGTTTTCAAGCGTACAACAA
TCATTTTTAGGTATTTTAAGGAACAAACGCACACCCTTTCCACCACCAGTTGCCTCAATGGATTTACTCTGGTCAGAAAC
AGAAAAACAAATGGCAAACCAAATGTTATCCATTTCTGCTGTTGGTGACGCAAAAACCATCAAATCAAAAATAAACCAAA
TCCTTAGCGATATAGTAGTGGATGAATTGATGGTGGTATCTTCTATTTTTGATACATCCAAACGGATCCGTTCCTTAGAA
ATCCTGATGGGAATCAAAGATCAAATTTTAGTATCTTCGACTTAA

Upstream 100 bases:

>100_bases
CCATTCTACTCACATAACAAGCGTATCTGTTTTTATCATTGAATTCCAAATTTTATGTTTTCTCCATTTACAGAAAATCA
CATTGTCTGGAATTGTGTAA

Downstream 100 bases:

>100_bases
GTTCCATTTGAACGATTGATTTATTTTTTTTTAAGTTTCAATTTTTATCGAATCATATACTCTCAATTTCTAAATCGTTG
CGGAGATACTGGGAGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVVIGHIASHTNTIRVGAGGIML
PNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRALRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTN
VPVWILGSSLFGAQLAALLGLPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ
SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVVDELMVVSSIFDTSKRIRSLE
ILMGIKDQILVSST

Sequences:

>Translated_334_residues
MSVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVVIGHIASHTNTIRVGAGGIML
PNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRALRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTN
VPVWILGSSLFGAQLAALLGLPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ
SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVVDELMVVSSIFDTSKRIRSLE
ILMGIKDQILVSST
>Mature_333_residues
SVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVVIGHIASHTNTIRVGAGGIMLP
NHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRALRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTNV
PVWILGSSLFGAQLAALLGLPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQS
FLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVVDELMVVSSIFDTSKRIRSLEI
LMGIKDQILVSST

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=330, Percent_Identity=50.9090909090909, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36581; Mature: 36449

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVV
CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
IGHIASHTNTIRVGAGGIMLPNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRA
HHHHHCCCCEEEECCCEEECCCCCCEEEEHHHCCHHHHCCCCEECCCCCCCCCHHHHHHH
LRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTNVPVWILGSSLFGAQLAALLG
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHHH
LPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVV
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DELMVVSSIFDTSKRIRSLEILMGIKDQILVSST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure 
SVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVV
CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH
IGHIASHTNTIRVGAGGIMLPNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRA
HHHHHCCCCEEEECCCEEECCCCCCEEEEHHHCCHHHHCCCCEECCCCCCCCCHHHHHHH
LRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTNVPVWILGSSLFGAQLAALLG
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHHH
LPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVV
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DELMVVSSIFDTSKRIRSLEILMGIKDQILVSST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]