| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yhbW [H]
Identifier: 183221856
GI number: 183221856
Start: 2573054
End: 2574058
Strand: Direct
Name: yhbW [H]
Synonym: LEPBI_I2489
Alternate gene names: 183221856
Gene position: 2573054-2574058 (Clockwise)
Preceding gene: 183221853
Following gene: 183221857
Centisome position: 71.48
GC content: 39.1
Gene sequence:
>1005_bases TTGTCCGTGGAACTTTCAATATTAGATTTAGTTTTTATCAACCAAGGTGAAACACCAAGAGATGCAATTCAAAATAGTGT CCAGGTAGCGAAAGCCGCAGAATCTTTGGATTATAAAAGAATTTGGATCGCAGAACATCATAATTTTCCATCCATTGCAA GTGCCGCAACATCAGTTGTGATCGGTCATATCGCATCTCATACCAACACCATTCGAGTCGGTGCAGGCGGGATCATGTTA CCAAACCATTCACCTCTTGTCATCGCAGAACAATTCGGAACATTAGAAAGTTTATACCCGAATCGAATTGATTTAGGTTT GGGAAGAGCACCAGGAACAGACCAACTCACCTTACGAGCATTACGTAGAGATGCAATGGCATCCCAACATTTCCCAGAAG ATGTGAAAGAACTCATTGAATACTTATCTTCTGAAAAAGAAGAAGGAAAAGTAAATGCAATCCCAGGTTTTGGAACCAAT GTACCTGTTTGGATTCTAGGTTCGAGTTTATTCGGTGCTCAACTTGCCGCTCTACTTGGATTACCATTTGCATTTGCTTC TCATTTTGCTCCAACATATTTGAAGGATGCTGTTTCTATTTACAAAAAACAGTTTCGACCATCCGCACATTTAGAGAAAC CTTACGTGATGATGGCAATGAATGTGATCGCCGCTGATTCAGATCCAGAAGCAGAATATTTGTTTTCAAGCGTACAACAA TCATTTTTAGGTATTTTAAGGAACAAACGCACACCCTTTCCACCACCAGTTGCCTCAATGGATTTACTCTGGTCAGAAAC AGAAAAACAAATGGCAAACCAAATGTTATCCATTTCTGCTGTTGGTGACGCAAAAACCATCAAATCAAAAATAAACCAAA TCCTTAGCGATATAGTAGTGGATGAATTGATGGTGGTATCTTCTATTTTTGATACATCCAAACGGATCCGTTCCTTAGAA ATCCTGATGGGAATCAAAGATCAAATTTTAGTATCTTCGACTTAA
Upstream 100 bases:
>100_bases CCATTCTACTCACATAACAAGCGTATCTGTTTTTATCATTGAATTCCAAATTTTATGTTTTCTCCATTTACAGAAAATCA CATTGTCTGGAATTGTGTAA
Downstream 100 bases:
>100_bases GTTCCATTTGAACGATTGATTTATTTTTTTTTAAGTTTCAATTTTTATCGAATCATATACTCTCAATTTCTAAATCGTTG CGGAGATACTGGGAGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVVIGHIASHTNTIRVGAGGIML PNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRALRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTN VPVWILGSSLFGAQLAALLGLPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVVDELMVVSSIFDTSKRIRSLE ILMGIKDQILVSST
Sequences:
>Translated_334_residues MSVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVVIGHIASHTNTIRVGAGGIML PNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRALRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTN VPVWILGSSLFGAQLAALLGLPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVVDELMVVSSIFDTSKRIRSLE ILMGIKDQILVSST >Mature_333_residues SVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVVIGHIASHTNTIRVGAGGIMLP NHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRALRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTNV PVWILGSSLFGAQLAALLGLPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQS FLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVVDELMVVSSIFDTSKRIRSLEI LMGIKDQILVSST
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=330, Percent_Identity=50.9090909090909, Blast_Score=361, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36581; Mature: 36449
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVV CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH IGHIASHTNTIRVGAGGIMLPNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRA HHHHHCCCCEEEECCCEEECCCCCCEEEEHHHCCHHHHCCCCEECCCCCCCCCHHHHHHH LRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTNVPVWILGSSLFGAQLAALLG HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHHH LPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVV HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DELMVVSSIFDTSKRIRSLEILMGIKDQILVSST HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure SVELSILDLVFINQGETPRDAIQNSVQVAKAAESLDYKRIWIAEHHNFPSIASAATSVV CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH IGHIASHTNTIRVGAGGIMLPNHSPLVIAEQFGTLESLYPNRIDLGLGRAPGTDQLTLRA HHHHHCCCCEEEECCCEEECCCCCCEEEEHHHCCHHHHCCCCEECCCCCCCCCHHHHHHH LRRDAMASQHFPEDVKELIEYLSSEKEEGKVNAIPGFGTNVPVWILGSSLFGAQLAALLG HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEECCHHHHHHHHHHHH LPFAFASHFAPTYLKDAVSIYKKQFRPSAHLEKPYVMMAMNVIAADSDPEAEYLFSSVQQ HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH SFLGILRNKRTPFPPPVASMDLLWSETEKQMANQMLSISAVGDAKTIKSKINQILSDIVV HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DELMVVSSIFDTSKRIRSLEILMGIKDQILVSST HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]