| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221842
Identifier: 183221842
GI number: 183221842
Start: 2555614
End: 2557455
Strand: Direct
Name: 183221842
Synonym: LEPBI_I2473
Alternate gene names: NA
Gene position: 2555614-2557455 (Clockwise)
Preceding gene: 183221832
Following gene: 183221844
Centisome position: 71.0
GC content: 40.28
Gene sequence:
>1842_bases ATGCACAAACAGTTTCACTATCTAATTCTCGGACTCTTTATTTGTGTGACCTTAAGTTTTGGAACAGGGGAAATCGGAGC ACAGTTCATCACACCTGTCAAAAAAGAAGCTCCTGAGCCACCACCGGCAGCTCCTCCTACGCCACCACAAGAACCGACCA AAGAACAAACGAAAGAAACTCCTCCCGTGGAAGAGCAAACTGATTATGTAAGTCCCATGAAGGGAAATTTGCCAGGAGAG TACTTTAAAAATTTTCAAATCACGAACAAACAAAAAAAAGCAATCCAGGAAAACAAAAACCTTTGGTTTGCAGACCGGTT CCGAGTGGGGTTTGGGTTAAGGCCAAAAGTTGATTCATTGTACAATACTGACTTCGATCGTTCCACGTCTGATAACAGAA ATACTGTGAGTAACCAAACGCAGTTTTATTTAGTGGGTGATGTTTCACCTAACATTACTTTTAAAATGACATTTCAAGAT GTAAGATTATGGGGCGGCGAAATTGTCACTGGTTCTTCTGACCAAAAACTTGGAGTGATCTCCAATGTTGGAACCACGAT CGATACAACACGGCAACGAGAATTTGCGATGAACAATTATACTGGATTTAGAGAAGCATTTTTGGATCTAAAAACTACAA ACCAAATGTTTCGAGTCCGAACAGGTCGTCAAATATTAGACTTTGGTGATGGAAGGATTCTAGGAGCACGTAACGATAGT TTAAATGGAAATTCGTTTGATGCCGTCAGGACAACACTAACTGTACAAAAACAGAGTTTGGATATCTTCGGTGCCATTGT CAGTTCTGAAAACAATGCCAATAGTATGGTTTCCAATAATTCAACAAGACTAGGTGGTCCGGGTAATGCTTCCTATTATG GAGTCCATTACGGAATCAAACCATGGGAATGGTTGGGTATTGAGGTATATAATTTCACTCTCTACAAACAAAAATTAAAA GCAACGAACACAACTCCGTATGGATCAGATATTTATTATCGAGACCCTGACCAGTTGAATACAACTGGATTTCGATTGAC CAATCGTACGAAAGGGAATGCATTACCAAAAGAAACAGGGATTGATTGGATGGTAGAGGCCGCTTGGCAAACAGGATTTA CTGGAGAAAGAGTATCTCCAGACTGGATCAATCAAAACGGGGCACTTAAAACCAATCGAGTCACGGGAGAACCACCTCCG CATTCGGATCCTGTTCGATACAAAGCAAATATCGTAGCAGCTCAGTTAGGTTACACTCCTGTCAAAGAGTTTAGGATCGG AATCCAATATGTCCAAGCATCAGGAGATCCCAATCGAAATGATAGCAGTGCTGCAACTTACAATCCATTATTTGCAACAC GTAGGATGGCCGGAGGAGCCATTCCTTTTGCTGGGAACGGAAACTCTGGGTTGGTTTTTTGGCAAAATATCAAAGATTAC TCAGTTCATATCAAATTTGAATCATCAAAATGGGGAACATTCATCATTAACCCTCACTGGTATTACAAAACGAAGTTACA AGACGGTTATTACGAAAATAATAACTATGTTGCGGGGAGTAAGGCTACAGGTGAAACAGCATCAACAGAAGATTTTTATA ATACAGAAGCATACAATCCGAATCGTCCGAAATTAGGAAAACATGTTGCAACGGAAGTCAATTTGATTTATATCATCACT CCTTTTGAAAATGTTTCCTTTTGGTTTGGAGCTAGTTCGCTTTATGCAGGTGATGCCATTCGCAACCAAAAGAACAATCC TTATGAAACAGATCCATACAGAAGGTATGATTTCAAACCGAATGCGAGTTTTTTCACATTCCAATCGGTCTTCGCCATCT AA
Upstream 100 bases:
>100_bases AAAATCCATCCATTCATTTAGGTATCCTACGCATTTGGAAATTTATGGGTAGGAAAGAGAAATGGACCTAAGTCCACTGG CAAAACGAAGGGAGTATCCA
Downstream 100 bases:
>100_bases ATTTTCTTCATTTTTTGGATTGGAACTTGAGTCCATCTAGGATTAAATCCAATCCAAAATCAAAGTTTTGTTTTCCGTTG TACTTACCCATAGCCACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MHKQFHYLILGLFICVTLSFGTGEIGAQFITPVKKEAPEPPPAAPPTPPQEPTKEQTKETPPVEEQTDYVSPMKGNLPGE YFKNFQITNKQKKAIQENKNLWFADRFRVGFGLRPKVDSLYNTDFDRSTSDNRNTVSNQTQFYLVGDVSPNITFKMTFQD VRLWGGEIVTGSSDQKLGVISNVGTTIDTTRQREFAMNNYTGFREAFLDLKTTNQMFRVRTGRQILDFGDGRILGARNDS LNGNSFDAVRTTLTVQKQSLDIFGAIVSSENNANSMVSNNSTRLGGPGNASYYGVHYGIKPWEWLGIEVYNFTLYKQKLK ATNTTPYGSDIYYRDPDQLNTTGFRLTNRTKGNALPKETGIDWMVEAAWQTGFTGERVSPDWINQNGALKTNRVTGEPPP HSDPVRYKANIVAAQLGYTPVKEFRIGIQYVQASGDPNRNDSSAATYNPLFATRRMAGGAIPFAGNGNSGLVFWQNIKDY SVHIKFESSKWGTFIINPHWYYKTKLQDGYYENNNYVAGSKATGETASTEDFYNTEAYNPNRPKLGKHVATEVNLIYIIT PFENVSFWFGASSLYAGDAIRNQKNNPYETDPYRRYDFKPNASFFTFQSVFAI
Sequences:
>Translated_613_residues MHKQFHYLILGLFICVTLSFGTGEIGAQFITPVKKEAPEPPPAAPPTPPQEPTKEQTKETPPVEEQTDYVSPMKGNLPGE YFKNFQITNKQKKAIQENKNLWFADRFRVGFGLRPKVDSLYNTDFDRSTSDNRNTVSNQTQFYLVGDVSPNITFKMTFQD VRLWGGEIVTGSSDQKLGVISNVGTTIDTTRQREFAMNNYTGFREAFLDLKTTNQMFRVRTGRQILDFGDGRILGARNDS LNGNSFDAVRTTLTVQKQSLDIFGAIVSSENNANSMVSNNSTRLGGPGNASYYGVHYGIKPWEWLGIEVYNFTLYKQKLK ATNTTPYGSDIYYRDPDQLNTTGFRLTNRTKGNALPKETGIDWMVEAAWQTGFTGERVSPDWINQNGALKTNRVTGEPPP HSDPVRYKANIVAAQLGYTPVKEFRIGIQYVQASGDPNRNDSSAATYNPLFATRRMAGGAIPFAGNGNSGLVFWQNIKDY SVHIKFESSKWGTFIINPHWYYKTKLQDGYYENNNYVAGSKATGETASTEDFYNTEAYNPNRPKLGKHVATEVNLIYIIT PFENVSFWFGASSLYAGDAIRNQKNNPYETDPYRRYDFKPNASFFTFQSVFAI >Mature_613_residues MHKQFHYLILGLFICVTLSFGTGEIGAQFITPVKKEAPEPPPAAPPTPPQEPTKEQTKETPPVEEQTDYVSPMKGNLPGE YFKNFQITNKQKKAIQENKNLWFADRFRVGFGLRPKVDSLYNTDFDRSTSDNRNTVSNQTQFYLVGDVSPNITFKMTFQD VRLWGGEIVTGSSDQKLGVISNVGTTIDTTRQREFAMNNYTGFREAFLDLKTTNQMFRVRTGRQILDFGDGRILGARNDS LNGNSFDAVRTTLTVQKQSLDIFGAIVSSENNANSMVSNNSTRLGGPGNASYYGVHYGIKPWEWLGIEVYNFTLYKQKLK ATNTTPYGSDIYYRDPDQLNTTGFRLTNRTKGNALPKETGIDWMVEAAWQTGFTGERVSPDWINQNGALKTNRVTGEPPP HSDPVRYKANIVAAQLGYTPVKEFRIGIQYVQASGDPNRNDSSAATYNPLFATRRMAGGAIPFAGNGNSGLVFWQNIKDY SVHIKFESSKWGTFIINPHWYYKTKLQDGYYENNNYVAGSKATGETASTEDFYNTEAYNPNRPKLGKHVATEVNLIYIIT PFENVSFWFGASSLYAGDAIRNQKNNPYETDPYRRYDFKPNASFFTFQSVFAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69074; Mature: 69074
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKQFHYLILGLFICVTLSFGTGEIGAQFITPVKKEAPEPPPAAPPTPPQEPTKEQTKET CCCHHHHHHHHHHHHHEECCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHCCC PPVEEQTDYVSPMKGNLPGEYFKNFQITNKQKKAIQENKNLWFADRFRVGFGLRPKVDSL CCCCCCCCCCCCCCCCCCHHHHCCCEECCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHH YNTDFDRSTSDNRNTVSNQTQFYLVGDVSPNITFKMTFQDVRLWGGEIVTGSSDQKLGVI HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEECCEEEECCCCCCEEEE SNVGTTIDTTRQREFAMNNYTGFREAFLDLKTTNQMFRVRTGRQILDFGDGRILGARNDS ECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCEEEECCCCC LNGNSFDAVRTTLTVQKQSLDIFGAIVSSENNANSMVSNNSTRLGGPGNASYYGVHYGIK CCCCCCHHEEEEEEEECCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEEECCCC PWEWLGIEVYNFTLYKQKLKATNTTPYGSDIYYRDPDQLNTTGFRLTNRTKGNALPKETG CCEEEEEEEEEEEEEEHHHHHCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCC IDWMVEAAWQTGFTGERVSPDWINQNGALKTNRVTGEPPPHSDPVRYKANIVAAQLGYTP CCEEEEEHHHCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCC VKEFRIGIQYVQASGDPNRNDSSAATYNPLFATRRMAGGAIPFAGNGNSGLVFWQNIKDY HHHHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCEEEEECCCCE SVHIKFESSKWGTFIINPHWYYKTKLQDGYYENNNYVAGSKATGETASTEDFYNTEAYNP EEEEEEECCCCCEEEECCCEEEEEEECCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCC NRPKLGKHVATEVNLIYIITPFENVSFWFGASSLYAGDAIRNQKNNPYETDPYRRYDFKP CCCCCCCCEEEEEEEEEEEECCCCCEEEECCCHHCCCHHHHCCCCCCCCCCCCEEECCCC NASFFTFQSVFAI CCCEEEHHHHHCC >Mature Secondary Structure MHKQFHYLILGLFICVTLSFGTGEIGAQFITPVKKEAPEPPPAAPPTPPQEPTKEQTKET CCCHHHHHHHHHHHHHEECCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHCCC PPVEEQTDYVSPMKGNLPGEYFKNFQITNKQKKAIQENKNLWFADRFRVGFGLRPKVDSL CCCCCCCCCCCCCCCCCCHHHHCCCEECCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHH YNTDFDRSTSDNRNTVSNQTQFYLVGDVSPNITFKMTFQDVRLWGGEIVTGSSDQKLGVI HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEECCEEEECCCCCCEEEE SNVGTTIDTTRQREFAMNNYTGFREAFLDLKTTNQMFRVRTGRQILDFGDGRILGARNDS ECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCEEEECCCCEEEECCCCC LNGNSFDAVRTTLTVQKQSLDIFGAIVSSENNANSMVSNNSTRLGGPGNASYYGVHYGIK CCCCCCHHEEEEEEEECCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEEECCCC PWEWLGIEVYNFTLYKQKLKATNTTPYGSDIYYRDPDQLNTTGFRLTNRTKGNALPKETG CCEEEEEEEEEEEEEEHHHHHCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCC IDWMVEAAWQTGFTGERVSPDWINQNGALKTNRVTGEPPPHSDPVRYKANIVAAQLGYTP CCEEEEEHHHCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCC VKEFRIGIQYVQASGDPNRNDSSAATYNPLFATRRMAGGAIPFAGNGNSGLVFWQNIKDY HHHHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCEEEEECCCCE SVHIKFESSKWGTFIINPHWYYKTKLQDGYYENNNYVAGSKATGETASTEDFYNTEAYNP EEEEEEECCCCCEEEECCCEEEEEEECCCEEECCCEEECCCCCCCCCCCCCCCCCCCCCC NRPKLGKHVATEVNLIYIITPFENVSFWFGASSLYAGDAIRNQKNNPYETDPYRRYDFKP CCCCCCCCEEEEEEEEEEEECCCCCEEEECCCHHCCCHHHHCCCCCCCCCCCCEEECCCC NASFFTFQSVFAI CCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA