| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221729
Identifier: 183221729
GI number: 183221729
Start: 2427710
End: 2428231
Strand: Direct
Name: 183221729
Synonym: LEPBI_I2358
Alternate gene names: NA
Gene position: 2427710-2428231 (Clockwise)
Preceding gene: 183221724
Following gene: 183221730
Centisome position: 67.44
GC content: 40.8
Gene sequence:
>522_bases GTGTCAGATCGAATCACTCCCTTTTTTTTACTCATCCTTTCTTTTTTGTTAGTCGTTAATTGCGGCCGAAAAGAACGAAC TCTTTTTGAAGAAGGGAAAAAATGGGAAATGGTCGGCGAAAAAACCAAAGCCCTCTATTATTACGAACTTTCTCTCCGAG AAAATCCAGAATATGATCCCGTCCTCAAACGAATGGGACTCCTCCTAGCAGACAGCGTCGAATCCATTGCCACTGCCATT TTTTATTTGGAAAATTACCACAGGCAAAAAAAAGACGATACAGAAGTGCAAAGAGAACTCTTCCGCCTCTATCTTACCAC AGGGTATGAAAAAGAAGCACTGGAAATTTTGGAAGAAATTCGGTTCCAGGGAAAAAAAGAAACCTTGGAATTTTTTGAAG CCAGTTATCTCTGTCTTACGAGAGGGGGGAAACAAAAAGAATACCTCCAAAGTTTAGAAAAAAGCCCACTTTCCGGAGAC CCTTATTACGCTCCTTGGGTTCGGGCTTGTGAAACAAAATAA
Upstream 100 bases:
>100_bases CATCTTTACTCTCTTATGTTACTTAAAGAGTCGGACAAAAAGCTTAAAGAGACTTATTATTTTTTTTGCCACAAATGACT ATGTCAGGAAAAAAGGAGAA
Downstream 100 bases:
>100_bases ACGAGATTGATTTAGACCGAGTCTAAGAAATAACGAACTAGATACAGGATAGGAGACATTATGAACCACAAAGTTGTCAT CATTGGATCAGGACCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSDRITPFFLLILSFLLVVNCGRKERTLFEEGKKWEMVGEKTKALYYYELSLRENPEYDPVLKRMGLLLADSVESIATAI FYLENYHRQKKDDTEVQRELFRLYLTTGYEKEALEILEEIRFQGKKETLEFFEASYLCLTRGGKQKEYLQSLEKSPLSGD PYYAPWVRACETK
Sequences:
>Translated_173_residues MSDRITPFFLLILSFLLVVNCGRKERTLFEEGKKWEMVGEKTKALYYYELSLRENPEYDPVLKRMGLLLADSVESIATAI FYLENYHRQKKDDTEVQRELFRLYLTTGYEKEALEILEEIRFQGKKETLEFFEASYLCLTRGGKQKEYLQSLEKSPLSGD PYYAPWVRACETK >Mature_172_residues SDRITPFFLLILSFLLVVNCGRKERTLFEEGKKWEMVGEKTKALYYYELSLRENPEYDPVLKRMGLLLADSVESIATAIF YLENYHRQKKDDTEVQRELFRLYLTTGYEKEALEILEEIRFQGKKETLEFFEASYLCLTRGGKQKEYLQSLEKSPLSGDP YYAPWVRACETK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20459; Mature: 20328
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRITPFFLLILSFLLVVNCGRKERTLFEEGKKWEMVGEKTKALYYYELSLRENPEYDP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCHHHEEEEEEEEECCCCCCCH VLKRMGLLLADSVESIATAIFYLENYHRQKKDDTEVQRELFRLYLTTGYEKEALEILEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH RFQGKKETLEFFEASYLCLTRGGKQKEYLQSLEKSPLSGDPYYAPWVRACETK HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SDRITPFFLLILSFLLVVNCGRKERTLFEEGKKWEMVGEKTKALYYYELSLRENPEYDP CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCHHHEEEEEEEEECCCCCCCH VLKRMGLLLADSVESIATAIFYLENYHRQKKDDTEVQRELFRLYLTTGYEKEALEILEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH RFQGKKETLEFFEASYLCLTRGGKQKEYLQSLEKSPLSGDPYYAPWVRACETK HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA