| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pabB [H]
Identifier: 183221724
GI number: 183221724
Start: 2422418
End: 2424283
Strand: Direct
Name: pabB [H]
Synonym: LEPBI_I2353
Alternate gene names: 183221724
Gene position: 2422418-2424283 (Clockwise)
Preceding gene: 183221723
Following gene: 183221729
Centisome position: 67.3
GC content: 38.42
Gene sequence:
>1866_bases TTGATTCCCATCAAATCCATTACTTGGAAATCCTTTGAAGAGAACTACCGAAAAACTGGCGGCCTTCTCTTCGAGGATAC CCTCTCCGAACCAGGGTTTACCATCTCTGAGCACTACTCCTCTCCGAAAAAAGAAATTTATCTCAAATACGATAAAAACC AAAACACAATGGAAGAGATAAAGAACATCTTCCGATCCTTGGACGAAGCTAGAAAAAATGGGTTGTATCCCTGTGGTATC CTTTACTTTGAATTAGGTTATCATTTCATTGAAGGACTAAATCTTACCACATCTCCCTTAGAAGAAGGAACTCCACTCCT CCACGTCACGCTCTTTGAAAAAAAACAAACCTATCAATACCAAAACCCAGATCCAAAGTTTTTTTCATCCTTTTTCATTT CCAATATTTTCCCAAAGTGGACTGAAGCAGATTACATCAAAAAGTGGAATCAAACATATGAGTATTTAAAGTTAGGTGAG AGTTATGAATTAAATTTATGTTTTCCTGTGGGATTTAATGTCACAGGGGATAATTTTTCACTCTACCAAAGTTTAAAGGC AAAACAAAAAACAAAATATTCCGTTTATTATCCCTATGATCAGAATGAAAAATTAATTTTATCTTTATCACCGGAATTGT TCTTTGAGGTGAAGGACCAAACCATACAAACCGAACCCATGAAAGGAACGATACCGAGAGGGAAGACAAAGGAAGAAGAC CAAAAAAACTTTTTACACTTACAAACTTCTGAAAAAGAGAAAGCGGAAAATGTAATGATCACCGATTTGTATCGGAATGA TTTAGGTAGGATCGCAAAACAAGGTACTGTGAATGTAGATGGATTGTTCTCCATTATAGGACTTGGAACGGTTTGGCAAA TGGTATCAAAAGTACGAGCAGAATTGAAAAATGCATTTGAATGGAACCATGTTTTATCTGCCCTGTTTCCATCCGGATCT GTGATTGGTGCCCCAAAACAAAGGTCATTTGAACTTCTTAGAACTTTAGAAGGAAACAATCGAGGTGTGTATACTGGTTC ATTTTTTACCTCAGAAGAAACAAATGGTTCTCCTTACATACGTGCCAGTGTCACGATCCGCACTTTGGATTTAACAAAAC GGGAAAATATAACCACTGGGGTGTATGGAATTGGAAGTGGTGTGACCGTTCTCTCCCAAGCAAACGAAGAATACAAAGAA TGCCTCTCCAAACTGAAAATTTTAACCAATCTCCACCAACCAAAGTTTGAAATCCTCGAAACACTACTCCTGATCAATGG ATCCATTTTTTTAAAAGAACTTCATTTGATGAGGATGGAAACCACTGCCCATCGATTTGGTTTCCCTTTTTCCAAAGAAA AACTAGAACTTTGTCTAAGTCATCTAATCAATAAACAAAAGGGACGAATACGCGTTCGATTATTACTCAGCGAAGAGGGA GAGTTTCAGTATGAAACAAATCCAATTCAAAAAAGGTCTGGCCGCCAATCCATTCGATTGGGTCTCTGTCGGGAACCGAT TGATTCCGACGATGTATTTTTATACCACAAAACCACAAACCGAAGTGTTTATGAGAAACACTTAGAGCTCTGCAAGACCA TGGGAGTGGATGATTGTATTCTCTTCGATAGAGAAGGGAGAGTGCTTGAGACATGCATCCGTAATTTGTTTTACAAACTC AATGGAGAGTGGTACACGCCGAATTTAGAAACGGGAGGCCTTCCTGGAGTCTTTCGGGAAAAATTACTCCGTAAAAATTG GATCAAGGAAAAAATCACAACAATGGATGATCTAAATCATGCATCCATTGTTCTCGTTGGAAACTCCGTTCGAGGATTCG AACGGGTAACTCTTGTTACAGAATGA
Upstream 100 bases:
>100_bases TAGGCCTTGATCCCTTGGATTGTTTTGACATCCAAACCAGTAAAAAAACAACCACTGTGTATCTAAATTACCCTCTAGAT GCACTTCAAAAAATGGAGTT
Downstream 100 bases:
>100_bases ATCGACTTAAGTCTTTGTCCTCAATGATCCCTTTTAGTTTACCTGAAACATAGTCCTGATTGATCACCACATGTTTTTGA TCATCTGGCAAATCAGGTGC
Product: putative para-aminobenzoate synthase
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MIPIKSITWKSFEENYRKTGGLLFEDTLSEPGFTISEHYSSPKKEIYLKYDKNQNTMEEIKNIFRSLDEARKNGLYPCGI LYFELGYHFIEGLNLTTSPLEEGTPLLHVTLFEKKQTYQYQNPDPKFFSSFFISNIFPKWTEADYIKKWNQTYEYLKLGE SYELNLCFPVGFNVTGDNFSLYQSLKAKQKTKYSVYYPYDQNEKLILSLSPELFFEVKDQTIQTEPMKGTIPRGKTKEED QKNFLHLQTSEKEKAENVMITDLYRNDLGRIAKQGTVNVDGLFSIIGLGTVWQMVSKVRAELKNAFEWNHVLSALFPSGS VIGAPKQRSFELLRTLEGNNRGVYTGSFFTSEETNGSPYIRASVTIRTLDLTKRENITTGVYGIGSGVTVLSQANEEYKE CLSKLKILTNLHQPKFEILETLLLINGSIFLKELHLMRMETTAHRFGFPFSKEKLELCLSHLINKQKGRIRVRLLLSEEG EFQYETNPIQKRSGRQSIRLGLCREPIDSDDVFLYHKTTNRSVYEKHLELCKTMGVDDCILFDREGRVLETCIRNLFYKL NGEWYTPNLETGGLPGVFREKLLRKNWIKEKITTMDDLNHASIVLVGNSVRGFERVTLVTE
Sequences:
>Translated_621_residues MIPIKSITWKSFEENYRKTGGLLFEDTLSEPGFTISEHYSSPKKEIYLKYDKNQNTMEEIKNIFRSLDEARKNGLYPCGI LYFELGYHFIEGLNLTTSPLEEGTPLLHVTLFEKKQTYQYQNPDPKFFSSFFISNIFPKWTEADYIKKWNQTYEYLKLGE SYELNLCFPVGFNVTGDNFSLYQSLKAKQKTKYSVYYPYDQNEKLILSLSPELFFEVKDQTIQTEPMKGTIPRGKTKEED QKNFLHLQTSEKEKAENVMITDLYRNDLGRIAKQGTVNVDGLFSIIGLGTVWQMVSKVRAELKNAFEWNHVLSALFPSGS VIGAPKQRSFELLRTLEGNNRGVYTGSFFTSEETNGSPYIRASVTIRTLDLTKRENITTGVYGIGSGVTVLSQANEEYKE CLSKLKILTNLHQPKFEILETLLLINGSIFLKELHLMRMETTAHRFGFPFSKEKLELCLSHLINKQKGRIRVRLLLSEEG EFQYETNPIQKRSGRQSIRLGLCREPIDSDDVFLYHKTTNRSVYEKHLELCKTMGVDDCILFDREGRVLETCIRNLFYKL NGEWYTPNLETGGLPGVFREKLLRKNWIKEKITTMDDLNHASIVLVGNSVRGFERVTLVTE >Mature_621_residues MIPIKSITWKSFEENYRKTGGLLFEDTLSEPGFTISEHYSSPKKEIYLKYDKNQNTMEEIKNIFRSLDEARKNGLYPCGI LYFELGYHFIEGLNLTTSPLEEGTPLLHVTLFEKKQTYQYQNPDPKFFSSFFISNIFPKWTEADYIKKWNQTYEYLKLGE SYELNLCFPVGFNVTGDNFSLYQSLKAKQKTKYSVYYPYDQNEKLILSLSPELFFEVKDQTIQTEPMKGTIPRGKTKEED QKNFLHLQTSEKEKAENVMITDLYRNDLGRIAKQGTVNVDGLFSIIGLGTVWQMVSKVRAELKNAFEWNHVLSALFPSGS VIGAPKQRSFELLRTLEGNNRGVYTGSFFTSEETNGSPYIRASVTIRTLDLTKRENITTGVYGIGSGVTVLSQANEEYKE CLSKLKILTNLHQPKFEILETLLLINGSIFLKELHLMRMETTAHRFGFPFSKEKLELCLSHLINKQKGRIRVRLLLSEEG EFQYETNPIQKRSGRQSIRLGLCREPIDSDDVFLYHKTTNRSVYEKHLELCKTMGVDDCILFDREGRVLETCIRNLFYKL NGEWYTPNLETGGLPGVFREKLLRKNWIKEKITTMDDLNHASIVLVGNSVRGFERVTLVTE
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=273, Percent_Identity=35.8974358974359, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI1787518, Length=251, Percent_Identity=26.2948207171315, Blast_Score=93, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320935, Length=228, Percent_Identity=32.4561403508772, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6324361, Length=290, Percent_Identity=29.3103448275862, Blast_Score=94, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 71818; Mature: 71818
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPIKSITWKSFEENYRKTGGLLFEDTLSEPGFTISEHYSSPKKEIYLKYDKNQNTMEEI CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCEEEEEEECCCCCHHHHH KNIFRSLDEARKNGLYPCGILYFELGYHFIEGLNLTTSPLEEGTPLLHVTLFEKKQTYQY HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEEECCCCCCCC QNPDPKFFSSFFISNIFPKWTEADYIKKWNQTYEYLKLGESYELNLCFPVGFNVTGDNFS CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEECCCCHH LYQSLKAKQKTKYSVYYPYDQNEKLILSLSPELFFEVKDQTIQTEPMKGTIPRGKTKEED HHHHHHHHHCCEEEEEECCCCCCEEEEEECCHHEEEECCCEEECCCCCCCCCCCCCCCCC QKNFLHLQTSEKEKAENVMITDLYRNDLGRIAKQGTVNVDGLFSIIGLGTVWQMVSKVRA CCCEEEEECCCHHHHCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ELKNAFEWNHVLSALFPSGSVIGAPKQRSFELLRTLEGNNRGVYTGSFFTSEETNGSPYI HHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCEEEEECEEECCCCCCCCEE RASVTIRTLDLTKRENITTGVYGIGSGVTVLSQANEEYKECLSKLKILTNLHQPKFEILE EEEEEEEEEECCCCCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH TLLLINGSIFLKELHLMRMETTAHRFGFPFSKEKLELCLSHLINKQKGRIRVRLLLSEEG HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC EFQYETNPIQKRSGRQSIRLGLCREPIDSDDVFLYHKTTNRSVYEKHLELCKTMGVDDCI CEEECCCCHHHCCCCCCEEHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEE LFDREGRVLETCIRNLFYKLNGEWYTPNLETGGLPGVFREKLLRKNWIKEKITTMDDLNH EECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC ASIVLVGNSVRGFERVTLVTE CEEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MIPIKSITWKSFEENYRKTGGLLFEDTLSEPGFTISEHYSSPKKEIYLKYDKNQNTMEEI CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCEEEEEEECCCCCHHHHH KNIFRSLDEARKNGLYPCGILYFELGYHFIEGLNLTTSPLEEGTPLLHVTLFEKKQTYQY HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEEECCCCCCCC QNPDPKFFSSFFISNIFPKWTEADYIKKWNQTYEYLKLGESYELNLCFPVGFNVTGDNFS CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEECCCCHH LYQSLKAKQKTKYSVYYPYDQNEKLILSLSPELFFEVKDQTIQTEPMKGTIPRGKTKEED HHHHHHHHHCCEEEEEECCCCCCEEEEEECCHHEEEECCCEEECCCCCCCCCCCCCCCCC QKNFLHLQTSEKEKAENVMITDLYRNDLGRIAKQGTVNVDGLFSIIGLGTVWQMVSKVRA CCCEEEEECCCHHHHCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ELKNAFEWNHVLSALFPSGSVIGAPKQRSFELLRTLEGNNRGVYTGSFFTSEETNGSPYI HHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHCCCCCEEEEECEEECCCCCCCCEE RASVTIRTLDLTKRENITTGVYGIGSGVTVLSQANEEYKECLSKLKILTNLHQPKFEILE EEEEEEEEEECCCCCCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH TLLLINGSIFLKELHLMRMETTAHRFGFPFSKEKLELCLSHLINKQKGRIRVRLLLSEEG HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC EFQYETNPIQKRSGRQSIRLGLCREPIDSDDVFLYHKTTNRSVYEKHLELCKTMGVDDCI CEEECCCCHHHCCCCCCEEHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEE LFDREGRVLETCIRNLFYKLNGEWYTPNLETGGLPGVFREKLLRKNWIKEKITTMDDLNH EECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC ASIVLVGNSVRGFERVTLVTE CEEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6330050; 9097040; 9278503; 7896119; 2251281; 7592344 [H]