| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221672
Identifier: 183221672
GI number: 183221672
Start: 2365468
End: 2366322
Strand: Direct
Name: 183221672
Synonym: LEPBI_I2297
Alternate gene names: NA
Gene position: 2365468-2366322 (Clockwise)
Preceding gene: 183221671
Following gene: 183221674
Centisome position: 65.71
GC content: 37.78
Gene sequence:
>855_bases ATGAACAAAACAATATTCGCTCTTTCATTCACCCTTCTCAGTTTTGCGCTATTTGCACAAGAATCTGGGAATCCGCAAGG GACACAAGTTTCCGCAGCTTCTTCCAAAGACAACCGGGATCTATACCCTCTCTCCATGTATGACGCAAGGATTCGTTTAA AAAACGTAACCTTCGTTAGACGACATGCAGATACAGGAAAAGGTGAATTTTTAGATGTCCAAGTGGAAATAGAATCTCGA GTTCCAGAAGACCACGAATATTCGATTTTTGTTTTAGCAGGTTTTGAAGGAGATCGAGTGAATAAAGATGAAAGAAAACT CGTTCCGTATCCTGCTTGGCGTAAAGCTGACCCTGAAAAAGACGAAAGAACATTATACTTCTCGAATATCATGCCAACTC CATTCACTGCAAAAGAAATTTGGGGTGAAGAAACTTACGCTAAGAAAAAAGAAGAAATGGAAAAACGTCACTATGCAGGA TTTGAAGCGGCAATGCCAGAACCTACATTCACTGAAGTTGTGGATTACCTATGCAAAAACAATGCAAAAGCTCTCCCCTT TACATTGTTTGGTGAAACTGGTCCAAGTAAAGAAAAACAAGTGATTTATAATTACGTAGGTCAAACTGCGGATGAAAAAA AACGCCAAGTGCATGAAACTCTTCCGAAACATACCTATACGATTTATAATAATAAATACAAAACAACCATCACAAGCCAC CACTACACTCAGTATCGACCCAATTTTTTAAGTTTCAACAAAGTGGCAATTCTTGTGTTTGATACAAAAAAACCGACTAA CAGTTTATTATTCCGTAAGTTCATCGATATCTCTGACTTAAAAATCACTTACTAA
Upstream 100 bases:
>100_bases TCGTGGACGAGAACAATCGGCCGAAAAAAGCCTAAATTCCCTAATTTTTCTGGGGCATTTCTTCGATACTAACTGTATAA ACCAAATTGGTAGTCGGAAC
Downstream 100 bases:
>100_bases AAGACAAACCTCGTCTCATCCAAGGCCAATCATTGGTCTTGGATCCATTTCCCATTCTATCCTTTCACCTCTTTTCCAAT CTTACCCTTCACCCACTGTT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNKTIFALSFTLLSFALFAQESGNPQGTQVSAASSKDNRDLYPLSMYDARIRLKNVTFVRRHADTGKGEFLDVQVEIESR VPEDHEYSIFVLAGFEGDRVNKDERKLVPYPAWRKADPEKDERTLYFSNIMPTPFTAKEIWGEETYAKKKEEMEKRHYAG FEAAMPEPTFTEVVDYLCKNNAKALPFTLFGETGPSKEKQVIYNYVGQTADEKKRQVHETLPKHTYTIYNNKYKTTITSH HYTQYRPNFLSFNKVAILVFDTKKPTNSLLFRKFIDISDLKITY
Sequences:
>Translated_284_residues MNKTIFALSFTLLSFALFAQESGNPQGTQVSAASSKDNRDLYPLSMYDARIRLKNVTFVRRHADTGKGEFLDVQVEIESR VPEDHEYSIFVLAGFEGDRVNKDERKLVPYPAWRKADPEKDERTLYFSNIMPTPFTAKEIWGEETYAKKKEEMEKRHYAG FEAAMPEPTFTEVVDYLCKNNAKALPFTLFGETGPSKEKQVIYNYVGQTADEKKRQVHETLPKHTYTIYNNKYKTTITSH HYTQYRPNFLSFNKVAILVFDTKKPTNSLLFRKFIDISDLKITY >Mature_284_residues MNKTIFALSFTLLSFALFAQESGNPQGTQVSAASSKDNRDLYPLSMYDARIRLKNVTFVRRHADTGKGEFLDVQVEIESR VPEDHEYSIFVLAGFEGDRVNKDERKLVPYPAWRKADPEKDERTLYFSNIMPTPFTAKEIWGEETYAKKKEEMEKRHYAG FEAAMPEPTFTEVVDYLCKNNAKALPFTLFGETGPSKEKQVIYNYVGQTADEKKRQVHETLPKHTYTIYNNKYKTTITSH HYTQYRPNFLSFNKVAILVFDTKKPTNSLLFRKFIDISDLKITY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32971; Mature: 32971
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTIFALSFTLLSFALFAQESGNPQGTQVSAASSKDNRDLYPLSMYDARIRLKNVTFVR CCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEECCEEEEECEEEEE RHADTGKGEFLDVQVEIESRVPEDHEYSIFVLAGFEGDRVNKDERKLVPYPAWRKADPEK ECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCC DERTLYFSNIMPTPFTAKEIWGEETYAKKKEEMEKRHYAGFEAAMPEPTFTEVVDYLCKN CCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC NAKALPFTLFGETGPSKEKQVIYNYVGQTADEKKRQVHETLPKHTYTIYNNKYKTTITSH CCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEEEEECC HYTQYRPNFLSFNKVAILVFDTKKPTNSLLFRKFIDISDLKITY CCEECCCCEECCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MNKTIFALSFTLLSFALFAQESGNPQGTQVSAASSKDNRDLYPLSMYDARIRLKNVTFVR CCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEECCEEEEECEEEEE RHADTGKGEFLDVQVEIESRVPEDHEYSIFVLAGFEGDRVNKDERKLVPYPAWRKADPEK ECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCC DERTLYFSNIMPTPFTAKEIWGEETYAKKKEEMEKRHYAGFEAAMPEPTFTEVVDYLCKN CCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC NAKALPFTLFGETGPSKEKQVIYNYVGQTADEKKRQVHETLPKHTYTIYNNKYKTTITSH CCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEEEEECC HYTQYRPNFLSFNKVAILVFDTKKPTNSLLFRKFIDISDLKITY CCEECCCCEECCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA