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The map label for this gene is panD

Identifier: 183221671

GI number: 183221671

Start: 2365046

End: 2365402

Strand: Direct

Name: panD

Synonym: LEPBI_I2296

Alternate gene names: 183221671

Gene position: 2365046-2365402 (Clockwise)

Preceding gene: 183221670

Following gene: 183221672

Centisome position: 65.7

GC content: 49.86

Gene sequence:

>357_bases
ATGATCATCACTGTTTGCAAAGGCAAAATCCATAGAGCCGTCGTCACTGAGGCAGAACTCCACTACGAAGGTAGCCTCAC
CGTTGACCAGGACCTAATGGACATGGCGGGTATGAAACCCTATGAACAAGTGAGTGTGGTGAACGTCAATAACGGTGCCA
GATTCGAAACTTACCTCATCGTAGGAGAACGAGGTTCCGGGACGATTTGCCTGAACGGTGCGGCCGCAAGACTCGGGATG
AAAGGTGACAAAGTCATCATCATCACCTACGGCCAGGTGGAAGAAAAGGATCTCCCAAACGATTACCAACCGAAAGTTGT
CTTCGTGGACGAGAACAATCGGCCGAAAAAAGCCTAA

Upstream 100 bases:

>100_bases
TTTCAGTGGACAGGATCAACACGAAAATCCATGTCCTTGTCCAAAAAAGCCTTTTGAATCTATCGGGCAAAATGTTTAGA
GTTTTATTTGAGAGGTCAGA

Downstream 100 bases:

>100_bases
ATTCCCTAATTTTTCTGGGGCATTTCTTCGATACTAACTGTATAAACCAAATTGGTAGTCGGAACATGAACAAAACAATA
TTCGCTCTTTCATTCACCCT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MIITVCKGKIHRAVVTEAELHYEGSLTVDQDLMDMAGMKPYEQVSVVNVNNGARFETYLIVGERGSGTICLNGAAARLGM
KGDKVIIITYGQVEEKDLPNDYQPKVVFVDENNRPKKA

Sequences:

>Translated_118_residues
MIITVCKGKIHRAVVTEAELHYEGSLTVDQDLMDMAGMKPYEQVSVVNVNNGARFETYLIVGERGSGTICLNGAAARLGM
KGDKVIIITYGQVEEKDLPNDYQPKVVFVDENNRPKKA
>Mature_118_residues
MIITVCKGKIHRAVVTEAELHYEGSLTVDQDLMDMAGMKPYEQVSVVNVNNGARFETYLIVGERGSGTICLNGAAARLGM
KGDKVIIITYGQVEEKDLPNDYQPKVVFVDENNRPKKA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=117, Percent_Identity=43.5897435897436, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_LEPBA (B0SBX0)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001963302.1
- ProteinModelPortal:   B0SBX0
- SMR:   B0SBX0
- GeneID:   6388868
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_2227
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- BioCyc:   LBIF355278:LBF_2227-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13016; Mature: 13016

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITVCKGKIHRAVVTEAELHYEGSLTVDQDLMDMAGMKPYEQVSVVNVNNGARFETYLI
CEEEEECCCEEEEEEEEEEEEECCCCEECCHHHHHHCCCCCCEEEEEECCCCCEEEEEEE
VGERGSGTICLNGAAARLGMKGDKVIIITYGQVEEKDLPNDYQPKVVFVDENNRPKKA
EECCCCCEEEECCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIITVCKGKIHRAVVTEAELHYEGSLTVDQDLMDMAGMKPYEQVSVVNVNNGARFETYLI
CEEEEECCCEEEEEEEEEEEEECCCCEECCHHHHHHCCCCCCEEEEEECCCCCEEEEEEE
VGERGSGTICLNGAAARLGMKGDKVIIITYGQVEEKDLPNDYQPKVVFVDENNRPKKA
EECCCCCEEEECCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA