| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pspE [C]
Identifier: 183221502
GI number: 183221502
Start: 2213408
End: 2213968
Strand: Reverse
Name: pspE [C]
Synonym: LEPBI_I2120
Alternate gene names: 183221502
Gene position: 2213968-2213408 (Counterclockwise)
Preceding gene: 183221505
Following gene: 183221501
Centisome position: 61.5
GC content: 37.97
Gene sequence:
>561_bases ATGATGAAACGAATCGCTTTGTTTTTTATCTTTTTATTTGTATTTTCTTTGGTGGCAAAACCCATCCAAAAACAATCTAA AAAACCAAAACTGGAACCAATTCCCAATCGGCTCATTGATTATGGAGAGTTTAAAAAGATTGTGAACCGTTCCGAAGGGG AAAGAGAAACTCACCGCCTAACAGAAGATCAATTTTTGAAGATGATGACCGAAGAAGGAGTCGTGGTCCTTGACGCTCGG AGTGAAAACAGGTATCGATTGTTACACATCAAAGGTGCCATCAATTTGCCATTTACCGAATTCACCAAAGATAGTTTGGC GTCCGTGATCCCGGAACCAAAATCCAAAATATTGATTTATTGTAATAATAATTTTGAAGGCAATGAACAAGCCTTTGCTG CAAAAAGTCCCGCGGCATCTCTCAATCTTTCTACATACAATTCGCTGAAAGCATATGGATATTCCAATATTTATGAATTG GGACCTTTACTTGATGTCAACCAAACGAAACTTCCTTTGGTTAGTGAACCAAAGGAAACAGAACCGAAGGCAAATCAATA A
Upstream 100 bases:
>100_bases CATTCACTCAATTTCTTCAATTTCCCCTGGCAAGTCGAAAAAAGGTTTGAGTTCCTTATCATTTTCCCATTATACTTGGT GTTTGATTGGATGAGGTACT
Downstream 100 bases:
>100_bases AAGGAGATTATCTTTGGTACTAGTTTTCTGAACCGCTAAAACTTTATGTTACAAGGAACATTATTATCAGAGATCATTGA AGCTGTTTCCAATACCTATG
Product: putative rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese-Like Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MMKRIALFFIFLFVFSLVAKPIQKQSKKPKLEPIPNRLIDYGEFKKIVNRSEGERETHRLTEDQFLKMMTEEGVVVLDAR SENRYRLLHIKGAINLPFTEFTKDSLASVIPEPKSKILIYCNNNFEGNEQAFAAKSPAASLNLSTYNSLKAYGYSNIYEL GPLLDVNQTKLPLVSEPKETEPKANQ
Sequences:
>Translated_186_residues MMKRIALFFIFLFVFSLVAKPIQKQSKKPKLEPIPNRLIDYGEFKKIVNRSEGERETHRLTEDQFLKMMTEEGVVVLDAR SENRYRLLHIKGAINLPFTEFTKDSLASVIPEPKSKILIYCNNNFEGNEQAFAAKSPAASLNLSTYNSLKAYGYSNIYEL GPLLDVNQTKLPLVSEPKETEPKANQ >Mature_186_residues MMKRIALFFIFLFVFSLVAKPIQKQSKKPKLEPIPNRLIDYGEFKKIVNRSEGERETHRLTEDQFLKMMTEEGVVVLDAR SENRYRLLHIKGAINLPFTEFTKDSLASVIPEPKSKILIYCNNNFEGNEQAFAAKSPAASLNLSTYNSLKAYGYSNIYEL GPLLDVNQTKLPLVSEPKETEPKANQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21246; Mature: 21246
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRIALFFIFLFVFSLVAKPIQKQSKKPKLEPIPNRLIDYGEFKKIVNRSEGERETHRL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHCCCCCCHHHHHC TEDQFLKMMTEEGVVVLDARSENRYRLLHIKGAINLPFTEFTKDSLASVIPEPKSKILIY CHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE CNNNFEGNEQAFAAKSPAASLNLSTYNSLKAYGYSNIYELGPLLDVNQTKLPLVSEPKET ECCCCCCCCCEEECCCCCCEEECCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC EPKANQ CCCCCC >Mature Secondary Structure MMKRIALFFIFLFVFSLVAKPIQKQSKKPKLEPIPNRLIDYGEFKKIVNRSEGERETHRL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHCCCCCCHHHHHC TEDQFLKMMTEEGVVVLDARSENRYRLLHIKGAINLPFTEFTKDSLASVIPEPKSKILIY CHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE CNNNFEGNEQAFAAKSPAASLNLSTYNSLKAYGYSNIYELGPLLDVNQTKLPLVSEPKET ECCCCCCCCCEEECCCCCCEEECCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCC EPKANQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA