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The map label for this gene is ybbC [H]

Identifier: 183221498

GI number: 183221498

Start: 2209184

End: 2210488

Strand: Reverse

Name: ybbC [H]

Synonym: LEPBI_I2116

Alternate gene names: 183221498

Gene position: 2210488-2209184 (Counterclockwise)

Preceding gene: 183221500

Following gene: 183221497

Centisome position: 61.41

GC content: 40.23

Gene sequence:

>1305_bases
ATGAAGCATGAAGGACATTTCTCCTTGAAGATTTGCTATATTATAGAAACATATACTTACATGACCAATTACTTTTTTAG
GTTTTCTCTCTGCTTTCTTGTCCTCGCCTGCCAAGGGAACACGGTTCCACAGTTCCGTGTCCACCCCTCTGATTCGAATG
TCCGATTGTCTCAGGACATTTTTTACGAAAAAGTCCTTCCAACGATGGCGGGAAAAAAATTAATGCTCGCAACCAATCCC
TCAGGCATTGGAACGAATCCAAAAAAAATCATTTCTTCCTTCGAAAAACACAAAATCAGATTAGAACATTTGATTGGGTT
GGAACATGGATTTTTAGGTTTAGAAGAAGAGTTTAGCCAAACACCTGTTACAATGGATTCAACCTTCAATCGACCATTGT
ATCATATCTATCGCATCAAAGATTCTGAACTCCGCGAGTTGGTCAAGGAAGTCGATTATGTTTTATTTGATGTGCAAGAT
GTAGGAATGCGTTGTTACACTTATTTGAGTGTATTAAAGCGGCTAATGGATGCACTCAAAAATACAAAAACAAAACTTAT
TGTTCTGGATCATATCCATGTTGCGATGCATTTGCCTCCCATGGGTGAAAAAATGAATCCGAAACACCTCAATTTTGCCG
GAGAATTTCCATCCCTACTCATCACAGGTATGACAACGGGTGAGTCGGCCATTTTTTATAACAAAGAATACTTAAAAGAA
TCGGTGGATCTTGTTGTGATTCCTGTAGAAGGCTACAAACGAGGGATGTACTTTGAAGACACAGGTATCCCTTGGACCAC
TCCTTCACCTAACTTACCAATGGTGGACTCGGCAAGGAATTATTTATCCCTTGTGCTCTTAGAAGGTGTGAACGTATCAG
TGGGACGAGGGACCCAAGCTCCCTTTGTTTATTTCGGTGCCCCTTGGATGACAAACCCGGAAGAACTCGCTTCAAAACTC
AGCACACTTGGAAATAAATCTTATTATTTTTCCACAGTGTATTTCAAACCAACCTTTGGTCCACACAAGGGAAAAATCTG
TTCAGGGCTTCGGATGAATTTAGTCAGACCTGATTATGATCCGATGTTACTTGCTTACGAACTCATTCGGCTCATGAAAG
AAACATATCCGAATGATTTTAAGTGGAGTAAAGGTTCAGTCAACCACTGGGTTGACCAATTGTGGGGGAGTGACCATTTT
CGAACGGCAATCAATGAAGGAAAAACGTACTCTGAGTTTCATAACACCTACTTGAGTGAAGAAACAAACGAAAATAAACG
GATCAAACCGTACTTAATGTACTAA

Upstream 100 bases:

>100_bases
CATTGTCTGGGAGTGATGGGTTTTTTTGCGCGGAATTGGACCCAGCACATGCCAAGATGGAAAGGACTAGAATCCCAGTA
AAGGGAGCAATTCGAAGTCT

Downstream 100 bases:

>100_bases
GGAAAGAATATGAAATTAGTATCGATCCTCATATTATATTTTGCATTTTTTTTGGGAGCTGTTTATCCATCCGAAACCAA
AATCAAATTGATCCCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKHEGHFSLKICYIIETYTYMTNYFFRFSLCFLVLACQGNTVPQFRVHPSDSNVRLSQDIFYEKVLPTMAGKKLMLATNP
SGIGTNPKKIISSFEKHKIRLEHLIGLEHGFLGLEEEFSQTPVTMDSTFNRPLYHIYRIKDSELRELVKEVDYVLFDVQD
VGMRCYTYLSVLKRLMDALKNTKTKLIVLDHIHVAMHLPPMGEKMNPKHLNFAGEFPSLLITGMTTGESAIFYNKEYLKE
SVDLVVIPVEGYKRGMYFEDTGIPWTTPSPNLPMVDSARNYLSLVLLEGVNVSVGRGTQAPFVYFGAPWMTNPEELASKL
STLGNKSYYFSTVYFKPTFGPHKGKICSGLRMNLVRPDYDPMLLAYELIRLMKETYPNDFKWSKGSVNHWVDQLWGSDHF
RTAINEGKTYSEFHNTYLSEETNENKRIKPYLMY

Sequences:

>Translated_434_residues
MKHEGHFSLKICYIIETYTYMTNYFFRFSLCFLVLACQGNTVPQFRVHPSDSNVRLSQDIFYEKVLPTMAGKKLMLATNP
SGIGTNPKKIISSFEKHKIRLEHLIGLEHGFLGLEEEFSQTPVTMDSTFNRPLYHIYRIKDSELRELVKEVDYVLFDVQD
VGMRCYTYLSVLKRLMDALKNTKTKLIVLDHIHVAMHLPPMGEKMNPKHLNFAGEFPSLLITGMTTGESAIFYNKEYLKE
SVDLVVIPVEGYKRGMYFEDTGIPWTTPSPNLPMVDSARNYLSLVLLEGVNVSVGRGTQAPFVYFGAPWMTNPEELASKL
STLGNKSYYFSTVYFKPTFGPHKGKICSGLRMNLVRPDYDPMLLAYELIRLMKETYPNDFKWSKGSVNHWVDQLWGSDHF
RTAINEGKTYSEFHNTYLSEETNENKRIKPYLMY
>Mature_434_residues
MKHEGHFSLKICYIIETYTYMTNYFFRFSLCFLVLACQGNTVPQFRVHPSDSNVRLSQDIFYEKVLPTMAGKKLMLATNP
SGIGTNPKKIISSFEKHKIRLEHLIGLEHGFLGLEEEFSQTPVTMDSTFNRPLYHIYRIKDSELRELVKEVDYVLFDVQD
VGMRCYTYLSVLKRLMDALKNTKTKLIVLDHIHVAMHLPPMGEKMNPKHLNFAGEFPSLLITGMTTGESAIFYNKEYLKE
SVDLVVIPVEGYKRGMYFEDTGIPWTTPSPNLPMVDSARNYLSLVLLEGVNVSVGRGTQAPFVYFGAPWMTNPEELASKL
STLGNKSYYFSTVYFKPTFGPHKGKICSGLRMNLVRPDYDPMLLAYELIRLMKETYPNDFKWSKGSVNHWVDQLWGSDHF
RTAINEGKTYSEFHNTYLSEETNENKRIKPYLMY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 50102; Mature: 50102

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHEGHFSLKICYIIETYTYMTNYFFRFSLCFLVLACQGNTVPQFRVHPSDSNVRLSQDI
CCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHH
FYEKVLPTMAGKKLMLATNPSGIGTNPKKIISSFEKHKIRLEHLIGLEHGFLGLEEEFSQ
HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
TPVTMDSTFNRPLYHIYRIKDSELRELVKEVDYVLFDVQDVGMRCYTYLSVLKRLMDALK
CCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHH
NTKTKLIVLDHIHVAMHLPPMGEKMNPKHLNFAGEFPSLLITGMTTGESAIFYNKEYLKE
CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECHHHHHC
SVDLVVIPVEGYKRGMYFEDTGIPWTTPSPNLPMVDSARNYLSLVLLEGVNVSVGRGTQA
CCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHEEEEECCCEEEECCCCCC
PFVYFGAPWMTNPEELASKLSTLGNKSYYFSTVYFKPTFGPHKGKICSGLRMNLVRPDYD
CEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHCCCEEECCCCCCC
PMLLAYELIRLMKETYPNDFKWSKGSVNHWVDQLWGSDHFRTAINEGKTYSEFHNTYLSE
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCC
ETNENKRIKPYLMY
CCCCCCCCCCEECC
>Mature Secondary Structure
MKHEGHFSLKICYIIETYTYMTNYFFRFSLCFLVLACQGNTVPQFRVHPSDSNVRLSQDI
CCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHH
FYEKVLPTMAGKKLMLATNPSGIGTNPKKIISSFEKHKIRLEHLIGLEHGFLGLEEEFSQ
HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
TPVTMDSTFNRPLYHIYRIKDSELRELVKEVDYVLFDVQDVGMRCYTYLSVLKRLMDALK
CCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHH
NTKTKLIVLDHIHVAMHLPPMGEKMNPKHLNFAGEFPSLLITGMTTGESAIFYNKEYLKE
CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECHHHHHC
SVDLVVIPVEGYKRGMYFEDTGIPWTTPSPNLPMVDSARNYLSLVLLEGVNVSVGRGTQA
CCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHEEEEECCCEEEECCCCCC
PFVYFGAPWMTNPEELASKLSTLGNKSYYFSTVYFKPTFGPHKGKICSGLRMNLVRPDYD
CEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHCCCEEECCCCCCC
PMLLAYELIRLMKETYPNDFKWSKGSVNHWVDQLWGSDHFRTAINEGKTYSEFHNTYLSE
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCC
ETNENKRIKPYLMY
CCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]