| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221494
Identifier: 183221494
GI number: 183221494
Start: 2206532
End: 2207023
Strand: Reverse
Name: 183221494
Synonym: LEPBI_I2112
Alternate gene names: NA
Gene position: 2207023-2206532 (Counterclockwise)
Preceding gene: 183221495
Following gene: 183221493
Centisome position: 61.31
GC content: 34.35
Gene sequence:
>492_bases ATGAACCACGAAGAATTCCATCGTTTCTTAAAAGAACAAAAACTCTATAAAAATCTTACGACCATATCCAAACTGATATC CATTAGTTTTTTAGTGATATATTTATATCTATTGTTTAGCTCCAGTTATACGGCAAGTCCATTGATTGTGGTCATCAATT ATTTGGCAATATTCACTGGATTTTCGGGGCTCATTCGGTTTAAATACTTTGAAATTCCTTCTATTTTACTCAGTGTTTTC GATTTGGGTTCCGAATCTCCGTTTTACCTTTTGAGTGGTGAAGAAAAAAAATATGTTTGGAGAAAGGCAGGTAGGGAAGA AGAACTACCAACTGATCCAAACCCAGATTGGATTGTCTCTACCTTACAATTACATGACAGATTCCCTTGGAAATCAGTAG GGAAATTCTATCTAGTTTTTTACCTTGTTGTGATTTTGATTTCCGTGTATTACCTGACTTCTGTTTATTTGGAAACCGGA TTTCAAAACTAA
Upstream 100 bases:
>100_bases ACTTTACTGACTTTTTAGGTCAAAAACAAATGGTACAAACAGATGTGCCTAGAGATTGGATCGGACGGATGCCCTCCATT TCTAATTTTCCTTTTGATAC
Downstream 100 bases:
>100_bases GACAACAATTTTCCTTGTCCTAGTGCTTCGTTCCAAAATCCTATCCCTATGGCTTTGAATTGTGGAATTGTAGGTCTCCC GAACGTCGGTAAGTCGACTA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNHEEFHRFLKEQKLYKNLTTISKLISISFLVIYLYLLFSSSYTASPLIVVINYLAIFTGFSGLIRFKYFEIPSILLSVF DLGSESPFYLLSGEEKKYVWRKAGREEELPTDPNPDWIVSTLQLHDRFPWKSVGKFYLVFYLVVILISVYYLTSVYLETG FQN
Sequences:
>Translated_163_residues MNHEEFHRFLKEQKLYKNLTTISKLISISFLVIYLYLLFSSSYTASPLIVVINYLAIFTGFSGLIRFKYFEIPSILLSVF DLGSESPFYLLSGEEKKYVWRKAGREEELPTDPNPDWIVSTLQLHDRFPWKSVGKFYLVFYLVVILISVYYLTSVYLETG FQN >Mature_163_residues MNHEEFHRFLKEQKLYKNLTTISKLISISFLVIYLYLLFSSSYTASPLIVVINYLAIFTGFSGLIRFKYFEIPSILLSVF DLGSESPFYLLSGEEKKYVWRKAGREEELPTDPNPDWIVSTLQLHDRFPWKSVGKFYLVFYLVVILISVYYLTSVYLETG FQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19158; Mature: 19158
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHEEFHRFLKEQKLYKNLTTISKLISISFLVIYLYLLFSSSYTASPLIVVINYLAIFTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FSGLIRFKYFEIPSILLSVFDLGSESPFYLLSGEEKKYVWRKAGREEELPTDPNPDWIVS HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHH TLQLHDRFPWKSVGKFYLVFYLVVILISVYYLTSVYLETGFQN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNHEEFHRFLKEQKLYKNLTTISKLISISFLVIYLYLLFSSSYTASPLIVVINYLAIFTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FSGLIRFKYFEIPSILLSVFDLGSESPFYLLSGEEKKYVWRKAGREEELPTDPNPDWIVS HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHH TLQLHDRFPWKSVGKFYLVFYLVVILISVYYLTSVYLETGFQN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA