| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yqfF [H]
Identifier: 183221475
GI number: 183221475
Start: 2186507
End: 2188873
Strand: Reverse
Name: yqfF [H]
Synonym: LEPBI_I2093
Alternate gene names: 183221475
Gene position: 2188873-2186507 (Counterclockwise)
Preceding gene: 183221476
Following gene: 183221474
Centisome position: 60.81
GC content: 38.66
Gene sequence:
>2367_bases ATGAAAGCAATCTTTGATTCTTCGATGACGAGTGTGACCGACTTTCTAACAAAAGTTAGGCCAGTATCTGTGGTTCGGAA CATTCAAATCATTTTGGTTTGTCTGACTTTACTTTTTGTGACTTATGTTCTTTCGATTCCTTTTTTTGGCCAATCGAAGG TCAACACCGACTCCGATGGCTTATTTTCAGAAGGAAAAATTGCCCCTGAAACCATCCAGTCGGTCAAAGAGTTTTCATAC GAAGATACTGAAAAAACAAATTTAGAAAAACAAAAAGCTAAATCGAATGTTCCTTTTGCTTTTGATAAAGACTTCGGTGT GTTAGTCGCAGGTATCGATACCAATTTATCAGAAGATTTAGAAATTTTACGTGTCCTTGTCCAGGAAGGGAAATCAAATC CGACAACGGTCAAAGATCGAATTCCTAGATGGCGCAATCGTACAAACGAAGAAATCCAAGCCATCTTGGATTATCCGAAA AAAGAAAAATTAAAAAACTTCATCCAACAGTATACAAATTTGATTTTTTCGAAGTATTGTATTGTCAAAGAAGATTTGCC TTTTGCCAAAGACCTCGACAAGACGGGAGCCAAAATCAGAAACATTGGAACCCAAGACCATACCACCATCATTGACGGAA ATTTGGTCATCCCTAGATCTCAAATTTATAAAGACGGACCTGTGACTGCCGTGTTATCAAAGTTAGCTTCTGAGAAATTA CCAAATGTATCCGATTCTCTATTAAAAGCTGTATCTAGGATTGGTTTGTACTATGTGTATTCCTATCCTGCCTGCAATTA TAACCCAGAAGAAACGGAAAATGCGAGGGTGAAAGCAGCAAGTGCAGTTTCAGTTCAAAAAAGCCGAATCCAAGCCAATG AAATCATCGTAAGAGCAGGTGATGTCATCACACCAGAAGTGAAGTTAAAACTGGACATGATGAATTTATATGCTACAAGG GCAAATCTTGCCTCTATCATTTCGATTTTTCTCACACAATGTGTTCTCATTGTGATAGTGGGATTTTATTTAATTCGATA CAGACCCAATCGATTGAATGACTTATCGAGTAACTTAATTATCTTTTTTACACTTTGGATTGTGATCGCTTCGATTTATC TATTGTCGAAGGTATTCTATGCAACTGACAGTGATTTGTCGACCGTATATTATTTTGGAATGTTTGTTCCTGTGGGGATG CTCTGTTTGTTACTCGGTTTTGTCTATGATGAACAACTCTCCATCGCCATCGGTTTCTTTTTGTCCTTTGCTGTCTTCTT TGCGTCTAGATACAATCCTACCTCATTCATGTTGGCCTTTACTGTTGCGGTGATGAGTTCCATTTACGGGCGACGTTTGC TCAAACGAATTGATTTCCTGAAAGCTGGTTTTTTACTCACCTTTGTGCAAATCCTTGTGACGACAGCAGGTTACTTATTT GATGGTCGTGAGTTTTTTGTCTCCACTGGCACTGGTTTTTTTAAGGATCTTTCCAATTCCAATTTATTTCGCATCACCGT AATGTGTTTTGTGAATGGATTTGCGAGTGCCACGGCCGTTCAGTTTTTACTGCCTCTATATGAGTATATTTTTAATATTC CCACTCGATTCAAATTGATCGAACTGGCCGATACAGGCCATCCATTATTACAACAACTTTTGACAAAGGCCCCATCGACT TACACCCATACCTTTATGGTGGCAGCCCTATCCGAAAGAGCTGCACAAAATCTCAATTTGGATCGTCTTCTAGTGCGTGT GGGTGTGTATTTTCATGACATTGGAAAAATTCCCAATGCTGGCTTTTTTGTAGAAAACCAACATTTAATCCCAAAACCAG AACATATCGATAAAAATAATCCGGCTCTTGCTGCCAAAACCGTCATTGATCACGTGTTAGATGGAATTGAGATGGCAAAA AAGGCAAGGCTTCCACGAGAAATTATCAATTTTATTCCCGAACACCATGGGACATCTACCATGGCCTTTTTTTACCATAA GGCCTTACAAGAAATTTCGAGTTCGGCACGTAGAAATATTAATAAAAAAGATTTTCAATACCCAGGTCCAAAACCACAAA GTAAAGAAACTGCTATTGTGATGATCGCAGATTCTTTGGAAGCCGCCTCTCGTTCGTTAGATGAAGTATCACAAGAAAGT TTGGATGATCTCATTCGTAAAATCATCAATTCAAAGCTTGCCGAAAATCAATTGGATGAGAGTGGACTGACAATCGGAGA TTTAGAAATCATCAAAGCAAGTTTCAAAGAAGTATTACTTTCCAGTCTTCACCAAAGACCAAAATACCCAAAACCAGAAG ATACAAAGGCCTTAGAGTCAGCGAATACCAAAAAGACGAAGCGATGA
Upstream 100 bases:
>100_bases AGACAATTTTTTTCGGAAGGGAAGACATTACCCGCCATCCGATTGTGGAATCCATTGTCCGACGATTCGAAGAAAACGAG AGTTTATTTAACAAAAAACC
Downstream 100 bases:
>100_bases ACCCGTCCCTTTCGGTTTTCACTCATTGGAATGACGAATCAAACCAATCAGAAATTTTTTCTGATCCTGTGATATCCAAT TGTGAAAAAATATTACGATT
Product: metal-dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MKAIFDSSMTSVTDFLTKVRPVSVVRNIQIILVCLTLLFVTYVLSIPFFGQSKVNTDSDGLFSEGKIAPETIQSVKEFSY EDTEKTNLEKQKAKSNVPFAFDKDFGVLVAGIDTNLSEDLEILRVLVQEGKSNPTTVKDRIPRWRNRTNEEIQAILDYPK KEKLKNFIQQYTNLIFSKYCIVKEDLPFAKDLDKTGAKIRNIGTQDHTTIIDGNLVIPRSQIYKDGPVTAVLSKLASEKL PNVSDSLLKAVSRIGLYYVYSYPACNYNPEETENARVKAASAVSVQKSRIQANEIIVRAGDVITPEVKLKLDMMNLYATR ANLASIISIFLTQCVLIVIVGFYLIRYRPNRLNDLSSNLIIFFTLWIVIASIYLLSKVFYATDSDLSTVYYFGMFVPVGM LCLLLGFVYDEQLSIAIGFFLSFAVFFASRYNPTSFMLAFTVAVMSSIYGRRLLKRIDFLKAGFLLTFVQILVTTAGYLF DGREFFVSTGTGFFKDLSNSNLFRITVMCFVNGFASATAVQFLLPLYEYIFNIPTRFKLIELADTGHPLLQQLLTKAPST YTHTFMVAALSERAAQNLNLDRLLVRVGVYFHDIGKIPNAGFFVENQHLIPKPEHIDKNNPALAAKTVIDHVLDGIEMAK KARLPREIINFIPEHHGTSTMAFFYHKALQEISSSARRNINKKDFQYPGPKPQSKETAIVMIADSLEAASRSLDEVSQES LDDLIRKIINSKLAENQLDESGLTIGDLEIIKASFKEVLLSSLHQRPKYPKPEDTKALESANTKKTKR
Sequences:
>Translated_788_residues MKAIFDSSMTSVTDFLTKVRPVSVVRNIQIILVCLTLLFVTYVLSIPFFGQSKVNTDSDGLFSEGKIAPETIQSVKEFSY EDTEKTNLEKQKAKSNVPFAFDKDFGVLVAGIDTNLSEDLEILRVLVQEGKSNPTTVKDRIPRWRNRTNEEIQAILDYPK KEKLKNFIQQYTNLIFSKYCIVKEDLPFAKDLDKTGAKIRNIGTQDHTTIIDGNLVIPRSQIYKDGPVTAVLSKLASEKL PNVSDSLLKAVSRIGLYYVYSYPACNYNPEETENARVKAASAVSVQKSRIQANEIIVRAGDVITPEVKLKLDMMNLYATR ANLASIISIFLTQCVLIVIVGFYLIRYRPNRLNDLSSNLIIFFTLWIVIASIYLLSKVFYATDSDLSTVYYFGMFVPVGM LCLLLGFVYDEQLSIAIGFFLSFAVFFASRYNPTSFMLAFTVAVMSSIYGRRLLKRIDFLKAGFLLTFVQILVTTAGYLF DGREFFVSTGTGFFKDLSNSNLFRITVMCFVNGFASATAVQFLLPLYEYIFNIPTRFKLIELADTGHPLLQQLLTKAPST YTHTFMVAALSERAAQNLNLDRLLVRVGVYFHDIGKIPNAGFFVENQHLIPKPEHIDKNNPALAAKTVIDHVLDGIEMAK KARLPREIINFIPEHHGTSTMAFFYHKALQEISSSARRNINKKDFQYPGPKPQSKETAIVMIADSLEAASRSLDEVSQES LDDLIRKIINSKLAENQLDESGLTIGDLEIIKASFKEVLLSSLHQRPKYPKPEDTKALESANTKKTKR >Mature_788_residues MKAIFDSSMTSVTDFLTKVRPVSVVRNIQIILVCLTLLFVTYVLSIPFFGQSKVNTDSDGLFSEGKIAPETIQSVKEFSY EDTEKTNLEKQKAKSNVPFAFDKDFGVLVAGIDTNLSEDLEILRVLVQEGKSNPTTVKDRIPRWRNRTNEEIQAILDYPK KEKLKNFIQQYTNLIFSKYCIVKEDLPFAKDLDKTGAKIRNIGTQDHTTIIDGNLVIPRSQIYKDGPVTAVLSKLASEKL PNVSDSLLKAVSRIGLYYVYSYPACNYNPEETENARVKAASAVSVQKSRIQANEIIVRAGDVITPEVKLKLDMMNLYATR ANLASIISIFLTQCVLIVIVGFYLIRYRPNRLNDLSSNLIIFFTLWIVIASIYLLSKVFYATDSDLSTVYYFGMFVPVGM LCLLLGFVYDEQLSIAIGFFLSFAVFFASRYNPTSFMLAFTVAVMSSIYGRRLLKRIDFLKAGFLLTFVQILVTTAGYLF DGREFFVSTGTGFFKDLSNSNLFRITVMCFVNGFASATAVQFLLPLYEYIFNIPTRFKLIELADTGHPLLQQLLTKAPST YTHTFMVAALSERAAQNLNLDRLLVRVGVYFHDIGKIPNAGFFVENQHLIPKPEHIDKNNPALAAKTVIDHVLDGIEMAK KARLPREIINFIPEHHGTSTMAFFYHKALQEISSSARRNINKKDFQYPGPKPQSKETAIVMIADSLEAASRSLDEVSQES LDDLIRKIINSKLAENQLDESGLTIGDLEIIKASFKEVLLSSLHQRPKYPKPEDTKALESANTKKTKR
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 88756; Mature: 88756
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIFDSSMTSVTDFLTKVRPVSVVRNIQIILVCLTLLFVTYVLSIPFFGQSKVNTDSDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LFSEGKIAPETIQSVKEFSYEDTEKTNLEKQKAKSNVPFAFDKDFGVLVAGIDTNLSEDL CCCCCCCCHHHHHHHHHCCCCCCHHHCHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHH EILRVLVQEGKSNPTTVKDRIPRWRNRTNEEIQAILDYPKKEKLKNFIQQYTNLIFSKYC HHHHHHHHCCCCCCCCHHHHCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IVKEDLPFAKDLDKTGAKIRNIGTQDHTTIIDGNLVIPRSQIYKDGPVTAVLSKLASEKL HEECCCCCHHHHHHHCHHHHCCCCCCCCEEEECCEECCHHHHCCCCCHHHHHHHHHHHCC PNVSDSLLKAVSRIGLYYVYSYPACNYNPEETENARVKAASAVSVQKSRIQANEIIVRAG CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECC DVITPEVKLKLDMMNLYATRANLASIISIFLTQCVLIVIVGFYLIRYRPNRLNDLSSNLI CEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHH IFFTLWIVIASIYLLSKVFYATDSDLSTVYYFGMFVPVGMLCLLLGFVYDEQLSIAIGFF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFAVFFASRYNPTSFMLAFTVAVMSSIYGRRLLKRIDFLKAGFLLTFVQILVTTAGYLF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGREFFVSTGTGFFKDLSNSNLFRITVMCFVNGFASATAVQFLLPLYEYIFNIPTRFKLI CCCEEEEECCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE ELADTGHPLLQQLLTKAPSTYTHTFMVAALSERAAQNLNLDRLLVRVGVYFHDIGKIPNA EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC GFFVENQHLIPKPEHIDKNNPALAAKTVIDHVLDGIEMAKKARLPREIINFIPEHHGTST CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH MAFFYHKALQEISSSARRNINKKDFQYPGPKPQSKETAIVMIADSLEAASRSLDEVSQES HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH LDDLIRKIINSKLAENQLDESGLTIGDLEIIKASFKEVLLSSLHQRPKYPKPEDTKALES HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ANTKKTKR CCCCCCCC >Mature Secondary Structure MKAIFDSSMTSVTDFLTKVRPVSVVRNIQIILVCLTLLFVTYVLSIPFFGQSKVNTDSDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LFSEGKIAPETIQSVKEFSYEDTEKTNLEKQKAKSNVPFAFDKDFGVLVAGIDTNLSEDL CCCCCCCCHHHHHHHHHCCCCCCHHHCHHHHHHCCCCCEEECCCCCEEEEECCCCCHHHH EILRVLVQEGKSNPTTVKDRIPRWRNRTNEEIQAILDYPKKEKLKNFIQQYTNLIFSKYC HHHHHHHHCCCCCCCCHHHHCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IVKEDLPFAKDLDKTGAKIRNIGTQDHTTIIDGNLVIPRSQIYKDGPVTAVLSKLASEKL HEECCCCCHHHHHHHCHHHHCCCCCCCCEEEECCEECCHHHHCCCCCHHHHHHHHHHHCC PNVSDSLLKAVSRIGLYYVYSYPACNYNPEETENARVKAASAVSVQKSRIQANEIIVRAG CCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECC DVITPEVKLKLDMMNLYATRANLASIISIFLTQCVLIVIVGFYLIRYRPNRLNDLSSNLI CEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHH IFFTLWIVIASIYLLSKVFYATDSDLSTVYYFGMFVPVGMLCLLLGFVYDEQLSIAIGFF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFAVFFASRYNPTSFMLAFTVAVMSSIYGRRLLKRIDFLKAGFLLTFVQILVTTAGYLF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGREFFVSTGTGFFKDLSNSNLFRITVMCFVNGFASATAVQFLLPLYEYIFNIPTRFKLI CCCEEEEECCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE ELADTGHPLLQQLLTKAPSTYTHTFMVAALSERAAQNLNLDRLLVRVGVYFHDIGKIPNA EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC GFFVENQHLIPKPEHIDKNNPALAAKTVIDHVLDGIEMAKKARLPREIINFIPEHHGTST CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH MAFFYHKALQEISSSARRNINKKDFQYPGPKPQSKETAIVMIADSLEAASRSLDEVSQES HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH LDDLIRKIINSKLAENQLDESGLTIGDLEIIKASFKEVLLSSLHQRPKYPKPEDTKALES HHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ANTKKTKR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]