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The map label for this gene is rfbA [H]

Identifier: 183221400

GI number: 183221400

Start: 2099705

End: 2100580

Strand: Reverse

Name: rfbA [H]

Synonym: LEPBI_I2018

Alternate gene names: 183221400

Gene position: 2100580-2099705 (Counterclockwise)

Preceding gene: 183221401

Following gene: 183221399

Centisome position: 58.35

GC content: 31.62

Gene sequence:

>876_bases
ATGAATAGCATTAATACTCCTGAGCTTGTCGAAGATTGGGACTTGATTTTAGAACCACGTAGAAAGTGGTATTCTTTGCG
TTTAGGTGAAATCATTCGATATAGAGATTTACTTTTTCTATTCGTGAGAAGAGATATAGTTTCTGTATATAAACAAACAA
TCCTTGGCCCCATATGGTTCTTTATTCAACCAGTTTTAACCTCTTTAACTTTTGCAGTAATATTTGGCGTGGTAGCAGGA
ATTGCTACTGATGGTATTCCAAATTTTCTATTTTATTTAAGTGGAATTACAATTTGGAATTACTTTGCTGATACTTTAGT
GAAAACTTCTGATACTTTTGTGGTCAATGCTGCAATATTTGGAAAAGTTTATTTTCCTCGCTTAATCGTTCCAATATCAA
TTGCTATTTCAAATTTGGTTAAATTTTTTCTGCAGTTCGTTTTGTTATTAGGGGTGATGTTGTTTTATAGCTTTTTAGGG
ACAGAGATAAAGATAAGTTTTTACTATCTTTTAATCCCTTTTTTGATTTTTTTGATGGGTATTATTGGTTTAGGATTTGG
TATTATTATTTCATCCTTAACAACAAAGTATCGGGATTTGAAATTTTTGGTTAATTTTGGCGTACAACTCTTGATGTATT
GTTCACCGATCGTTTTTCCTCTTTCGATCGTAACTAATAATTTTCCGAAGATGAAATTAATTTTATTATTAAATCCAGTT
ACAAGTTTGATCGAGGCTTTTCGTTTTATCCTTCTCGGAGTTGGTGTTTTTGATTGGGTCTATCTCGGAATCAGTTTGGG
ATTTACCGTCGTTTTAGTTTTTCTTTCAATAATCATTTTCAATCGAGTTGAGAGATCATTTATCGATACTGTTTAG

Upstream 100 bases:

>100_bases
CATGTTCCATCAAAAAACAATGATCCTTTAAAGATCATATTTTGATTTTTCATCATTACTCTCTAACAGCGAATTTGTTC
GAATAAGGTTGCAAATAAAA

Downstream 100 bases:

>100_bases
AGTCAGTGTTGAGTTTTAGGAAACAAAATTCATGAGTGATGTAGTTTTACGAATAGATAATATCTCCAAACAATACAGAT
TGGGTCAAATAAGCACAGGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNSINTPELVEDWDLILEPRRKWYSLRLGEIIRYRDLLFLFVRRDIVSVYKQTILGPIWFFIQPVLTSLTFAVIFGVVAG
IATDGIPNFLFYLSGITIWNYFADTLVKTSDTFVVNAAIFGKVYFPRLIVPISIAISNLVKFFLQFVLLLGVMLFYSFLG
TEIKISFYYLLIPFLIFLMGIIGLGFGIIISSLTTKYRDLKFLVNFGVQLLMYCSPIVFPLSIVTNNFPKMKLILLLNPV
TSLIEAFRFILLGVGVFDWVYLGISLGFTVVLVFLSIIIFNRVERSFIDTV

Sequences:

>Translated_291_residues
MNSINTPELVEDWDLILEPRRKWYSLRLGEIIRYRDLLFLFVRRDIVSVYKQTILGPIWFFIQPVLTSLTFAVIFGVVAG
IATDGIPNFLFYLSGITIWNYFADTLVKTSDTFVVNAAIFGKVYFPRLIVPISIAISNLVKFFLQFVLLLGVMLFYSFLG
TEIKISFYYLLIPFLIFLMGIIGLGFGIIISSLTTKYRDLKFLVNFGVQLLMYCSPIVFPLSIVTNNFPKMKLILLLNPV
TSLIEAFRFILLGVGVFDWVYLGISLGFTVVLVFLSIIIFNRVERSFIDTV
>Mature_291_residues
MNSINTPELVEDWDLILEPRRKWYSLRLGEIIRYRDLLFLFVRRDIVSVYKQTILGPIWFFIQPVLTSLTFAVIFGVVAG
IATDGIPNFLFYLSGITIWNYFADTLVKTSDTFVVNAAIFGKVYFPRLIVPISIAISNLVKFFLQFVLLLGVMLFYSFLG
TEIKISFYYLLIPFLIFLMGIIGLGFGIIISSLTTKYRDLKFLVNFGVQLLMYCSPIVFPLSIVTNNFPKMKLILLLNPV
TSLIEAFRFILLGVGVFDWVYLGISLGFTVVLVFLSIIIFNRVERSFIDTV

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 33342; Mature: 33342

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]