| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221374
Identifier: 183221374
GI number: 183221374
Start: 2071920
End: 2073323
Strand: Reverse
Name: 183221374
Synonym: LEPBI_I1992
Alternate gene names: NA
Gene position: 2073323-2071920 (Counterclockwise)
Preceding gene: 183221375
Following gene: 183221373
Centisome position: 57.6
GC content: 31.7
Gene sequence:
>1404_bases GTGAAAATCGAGAGGGAACGCATAAAAAATTGGAAGATAGAAATTTTAACCTACTTATTGATTTCAATTGGCATTTTTTT ACGACTCTTTTCTATTGATCGACAAAGTTTATGGACAGATGAATTATATTCTGTATATGCATCTTCGATTCAGAATTGGT CTGAATTTTGGGTTTATTTGGCAGATGATCCTCATCCTCCTTTATTTCAAATTTTACTTCGACTTTGGATTCGACTCATC CCAGGAATGAGTGAGATTACAATTAAATTATTTCCTGCAATCATATCCATATTCAACTTAATACTGATAGGTATTTTCAC TCGCGCTTGGGATTCAAAGAAACGATTTTTGTTTCTTTGTTTGTTCTCTTTGTCACCAGGCGCAATATATTATGCCCAAG AAGTTCGATCATATAGCCTACTTTTATGTTTATCTTCATTGATTTTGATATTTTTTGAGAAATTGATTTCGGAACCAAAG AAGATTATGCATTTGTGCATATTAAGTGTCCTTTCCGTAACGATTTCTTATGTTCATTTATTCGGATTTATATTCATTGG AAGTTTGTATTTTGTTTGTTTTGTTTATTATTTCTATCATAAAGATCCAATTTCCAAGGTAATATTTTTTCTTGGGTTTA TATCTTTTTGCTTTTATTTGCCATTTTTGTTTCAGTTATTCATTACTTCTAGGATACAAACAGCTTCTTGGATCGATCCT CCTGGGATCGTATTATTATTAACATATGGATCTCTGTTCTTATATACTTCAAAAAAATATTTTTTCCTGACAGCACTTTT GCCTGTGCTCTTTTTCATCTATTCGCTGGTTGGATCGATTCAAACCAAAAGAAATCATAAACAAAAATTTTATTTAACAT TTGGTGAATTGTCACTATTTGTAGCCATTTTGATTGTAGTTTCTACAACTTTATTTTCTTATATTAAACCAATTGCAACT AACAGAAATTGGATTGTAACATTACCATTGGTGTATTTATTTGCCAGTGAAAATTTAAGAAATCAAATTCAGAATAAAAA AATTCTTTTGGGATTAATTCTATTTTTAAGTCTTTCCTTTATCGATTTTAAGAAGAATTTCTACATTCAATTCAAAGAGG ACTGGCGAGGTACAACTTCTTATCTCATTGAGCATTGTGCCGGTCCGGTTGTCTTTTCCGATGCAACACCTGAATATATC TCGCTCTACTTGAATTGGCAAGGCAATCAGCGGTTAACACCGACTATACTCGGAAATAATGTTGATTTGCAACAGAAAGA GACTTGTGTAGTAAAAAGATTTATGGGCGGAAACGGAAAAAGTTTTGAGAACTCCGATCTGTGGAAAAAGCAAAAAGAGA CTGCTTTGTATGGTTTTAGCATCGAAGAATTTATCAAATATTAA
Upstream 100 bases:
>100_bases AAAAGTTTGATATCAATTTCCAATTAAAACCTAACGAATATCAGGTAACTTCTGAGCATAAAATTGCACATTTCCAAGGT TTTCTTTTGGAGAAGAAAAG
Downstream 100 bases:
>100_bases ATATGAATTCTTTAATTAGCGAAGCATACCTATGAAATGGATTTAAATATTAAAGTATAAGTTATAAATAAGGTTACTCA AGTAGATTAAGAAAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MKIERERIKNWKIEILTYLLISIGIFLRLFSIDRQSLWTDELYSVYASSIQNWSEFWVYLADDPHPPLFQILLRLWIRLI PGMSEITIKLFPAIISIFNLILIGIFTRAWDSKKRFLFLCLFSLSPGAIYYAQEVRSYSLLLCLSSLILIFFEKLISEPK KIMHLCILSVLSVTISYVHLFGFIFIGSLYFVCFVYYFYHKDPISKVIFFLGFISFCFYLPFLFQLFITSRIQTASWIDP PGIVLLLTYGSLFLYTSKKYFFLTALLPVLFFIYSLVGSIQTKRNHKQKFYLTFGELSLFVAILIVVSTTLFSYIKPIAT NRNWIVTLPLVYLFASENLRNQIQNKKILLGLILFLSLSFIDFKKNFYIQFKEDWRGTTSYLIEHCAGPVVFSDATPEYI SLYLNWQGNQRLTPTILGNNVDLQQKETCVVKRFMGGNGKSFENSDLWKKQKETALYGFSIEEFIKY
Sequences:
>Translated_467_residues MKIERERIKNWKIEILTYLLISIGIFLRLFSIDRQSLWTDELYSVYASSIQNWSEFWVYLADDPHPPLFQILLRLWIRLI PGMSEITIKLFPAIISIFNLILIGIFTRAWDSKKRFLFLCLFSLSPGAIYYAQEVRSYSLLLCLSSLILIFFEKLISEPK KIMHLCILSVLSVTISYVHLFGFIFIGSLYFVCFVYYFYHKDPISKVIFFLGFISFCFYLPFLFQLFITSRIQTASWIDP PGIVLLLTYGSLFLYTSKKYFFLTALLPVLFFIYSLVGSIQTKRNHKQKFYLTFGELSLFVAILIVVSTTLFSYIKPIAT NRNWIVTLPLVYLFASENLRNQIQNKKILLGLILFLSLSFIDFKKNFYIQFKEDWRGTTSYLIEHCAGPVVFSDATPEYI SLYLNWQGNQRLTPTILGNNVDLQQKETCVVKRFMGGNGKSFENSDLWKKQKETALYGFSIEEFIKY >Mature_467_residues MKIERERIKNWKIEILTYLLISIGIFLRLFSIDRQSLWTDELYSVYASSIQNWSEFWVYLADDPHPPLFQILLRLWIRLI PGMSEITIKLFPAIISIFNLILIGIFTRAWDSKKRFLFLCLFSLSPGAIYYAQEVRSYSLLLCLSSLILIFFEKLISEPK KIMHLCILSVLSVTISYVHLFGFIFIGSLYFVCFVYYFYHKDPISKVIFFLGFISFCFYLPFLFQLFITSRIQTASWIDP PGIVLLLTYGSLFLYTSKKYFFLTALLPVLFFIYSLVGSIQTKRNHKQKFYLTFGELSLFVAILIVVSTTLFSYIKPIAT NRNWIVTLPLVYLFASENLRNQIQNKKILLGLILFLSLSFIDFKKNFYIQFKEDWRGTTSYLIEHCAGPVVFSDATPEYI SLYLNWQGNQRLTPTILGNNVDLQQKETCVVKRFMGGNGKSFENSDLWKKQKETALYGFSIEEFIKY
Specific function: Unknown
COG id: COG5305
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54744; Mature: 54744
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIERERIKNWKIEILTYLLISIGIFLRLFSIDRQSLWTDELYSVYASSIQNWSEFWVYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHEEEEE ADDPHPPLFQILLRLWIRLIPGMSEITIKLFPAIISIFNLILIGIFTRAWDSKKRFLFLC ECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LFSLSPGAIYYAQEVRSYSLLLCLSSLILIFFEKLISEPKKIMHLCILSVLSVTISYVHL EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGFIFIGSLYFVCFVYYFYHKDPISKVIFFLGFISFCFYLPFLFQLFITSRIQTASWIDP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PGIVLLLTYGSLFLYTSKKYFFLTALLPVLFFIYSLVGSIQTKRNHKQKFYLTFGELSLF CCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH VAILIVVSTTLFSYIKPIATNRNWIVTLPLVYLFASENLRNQIQNKKILLGLILFLSLSF HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH IDFKKNFYIQFKEDWRGTTSYLIEHCAGPVVFSDATPEYISLYLNWQGNQRLTPTILGNN HEECCCEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCEECCEEECCC VDLQQKETCVVKRFMGGNGKSFENSDLWKKQKETALYGFSIEEFIKY CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCHHHHHCC >Mature Secondary Structure MKIERERIKNWKIEILTYLLISIGIFLRLFSIDRQSLWTDELYSVYASSIQNWSEFWVYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHEEEEE ADDPHPPLFQILLRLWIRLIPGMSEITIKLFPAIISIFNLILIGIFTRAWDSKKRFLFLC ECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LFSLSPGAIYYAQEVRSYSLLLCLSSLILIFFEKLISEPKKIMHLCILSVLSVTISYVHL EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGFIFIGSLYFVCFVYYFYHKDPISKVIFFLGFISFCFYLPFLFQLFITSRIQTASWIDP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PGIVLLLTYGSLFLYTSKKYFFLTALLPVLFFIYSLVGSIQTKRNHKQKFYLTFGELSLF CCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH VAILIVVSTTLFSYIKPIATNRNWIVTLPLVYLFASENLRNQIQNKKILLGLILFLSLSF HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH IDFKKNFYIQFKEDWRGTTSYLIEHCAGPVVFSDATPEYISLYLNWQGNQRLTPTILGNN HEECCCEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCEECCEEECCC VDLQQKETCVVKRFMGGNGKSFENSDLWKKQKETALYGFSIEEFIKY CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA