| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is icfG [H]
Identifier: 183221191
GI number: 183221191
Start: 1883877
End: 1885790
Strand: Direct
Name: icfG [H]
Synonym: LEPBI_I1805
Alternate gene names: 183221191
Gene position: 1883877-1885790 (Clockwise)
Preceding gene: 183221190
Following gene: 183221193
Centisome position: 52.33
GC content: 32.55
Gene sequence:
>1914_bases ATGAAAACGTTCTTAGATAAAGGTCGAAATGTTTATTCGAATTTTATCTATGTCATTCGAACCAAATCGTTTTACAAACT ATTTTTATCATTAGTTTTATTTATCATCTTACCGTATTCCATCATCGCAGGAAGGATGATTTATTTTGAATATGATAACG CCTTGGATTGGAACCAAAGATTCCAACTCATCAGAATCCAACTCCTAGCCATCGACATTGAAAATCAAATCCAAGACCAG CTGCAGAAAGAATTCACTAATCCAAAGAACAAATTGGAATCAAAAAAAAATTCAGATGAAATTAGAACATTTTGTAAACT AGACTCATCTGATTCAAAACAAGAAGTTTTTTTTCAAATGGTTCGTTGTCATTTTTCAGAAGAAGAACAATCTTATTTTC TTCTTTCAGATGGAAATGGATATCGAATATATCCAAGTACTTTCATTGAAGAAGCACTTCTAGACTCCCCTTTCAGTGAT CCAAATGAAGGCCTTTTTTTATTAAATTCAAAAGGTGATTTTGGTATTTCAGGTTTTATTGAAGATGATTTTTTAGTATC TGAGGAATGGAAAGAAAAAACAAAGTCTTCTCTCCAAACAAATTCAAATTTACCAACCTTAAAAGAGGTTAGGAAGGATG ACTTGGGATTTTTTCTTGTGGGAGTTCCACTTTATGGATTGCCGATTCACTTATTTGTGGTGAGTCCCATTAATTTAGTA TTACAACCAATTCTCTCTACTTTAAAAACAAACCTAACTACGTTATCTGGAATCCTTTTGTTTACATTTTTCATCTCATT CTTTATCTCTTTAAAAGAAATTGAATCAAAACAAAAATTAAAATTAATTCTAAAAGAATTCCCTCATGCTGCCATTTTGT ATGATTCAACTGGGAATGTTCTTTTAGAAAATCCCCATATAGAACCGACGATCCAATTGAAAGATGTTTTTATATACCAA GACTCATTCGTTTTGTGGTTAAAAAAGGAAGTATTAGTATTTTTGAAAGAAATCAAAGACCAAAAAATGGAACAACAACA GCTTCGGAAAGAAGAACTGGAAGTGTTTACAAATAATGGAGAGAATCTTCTATTAGAAATCACATATCAAATTTGGTACT TAGAACAAGACCACCAATCTGCAAGCGGAGCCTTAATTCTAGTTCAGGATGTAACTAAAAAACGTCTCGAGTTTGAAAAA GAGATGGATTACGCAAGAGACTTACAAAAAAAATACCTCCCTTCACGGATTCAAATTTTTCCAAAATTAGATTATGAGAT CCTCTATCGGCCACTCATCCAAGTGGGTGGTGATTATTATGATTATATCGATTTAGGGAACAATCGTTATATTTTTGCAT TAGGTGATGTCATTGGTCATGGAGTGAAAGCTGCAATGATGATGACTGTCTTAAAAGTATTATTCCACCAAATTGCAAAA ACAGAACCAGATCCTAGTCAAATTCTATTAAAAATGAACGAGGGTATCGCTACCCATTTTCCTGATCCTTATGCCTTTGT ACCGTTTTTGTTTCTGTTGTTTGATATAAATCAAAATTTTGTTTATTATGGCAATGCGGGCCACCCTGGAATGGTTCATT TTTCCAAAAATGGTCCCGAGTGTTATGAAAAACTAAACCCGATGTTTGGAATGTTACCTAAGTTTTCACCCAAGGTTTTA GAATTTCCAATCACAAAAGGAGATCGATTCTATTTGTTTACGGATGGACTAAAAGATGTTGAAAATTTTAAACAAGAGAA ACTCTGGGAAAATGAATTAATGGGGTTTTTCCATACCATGGAAAATAATCATATGTCTTTCATAAAACAAGAATTAGATT CCAAGATCAGATCTTTTTCAGAAGGAAAGGACCTATTAGATGACATCACTTGGATTGGTATTGATATCATTTAA
Upstream 100 bases:
>100_bases TCAAAAGGATTTACTATTGGAATTTAGTGCCATTGATCGTTTAGGCAACGAAGAAATCCCCAAAAAAATATACATTCAAA AATCGACCAAAGGCGAGTGA
Downstream 100 bases:
>100_bases TCATTCTTCCAAGGGAGGATTGTCTAAAAGTTCAATTCCTTCATTGTTTTTATGAAAATAATTCATATCCCATTCTGTAT CAAATAACAGAGCCATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFEYDNALDWNQRFQLIRIQLLAIDIENQIQDQ LQKEFTNPKNKLESKKNSDEIRTFCKLDSSDSKQEVFFQMVRCHFSEEEQSYFLLSDGNGYRIYPSTFIEEALLDSPFSD PNEGLFLLNSKGDFGISGFIEDDFLVSEEWKEKTKSSLQTNSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLV LQPILSTLKTNLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNVLLENPHIEPTIQLKDVFIYQ DSFVLWLKKEVLVFLKEIKDQKMEQQQLRKEELEVFTNNGENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEK EMDYARDLQKKYLPSRIQIFPKLDYEILYRPLIQVGGDYYDYIDLGNNRYIFALGDVIGHGVKAAMMMTVLKVLFHQIAK TEPDPSQILLKMNEGIATHFPDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPECYEKLNPMFGMLPKFSPKVL EFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTMENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII
Sequences:
>Translated_637_residues MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFEYDNALDWNQRFQLIRIQLLAIDIENQIQDQ LQKEFTNPKNKLESKKNSDEIRTFCKLDSSDSKQEVFFQMVRCHFSEEEQSYFLLSDGNGYRIYPSTFIEEALLDSPFSD PNEGLFLLNSKGDFGISGFIEDDFLVSEEWKEKTKSSLQTNSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLV LQPILSTLKTNLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNVLLENPHIEPTIQLKDVFIYQ DSFVLWLKKEVLVFLKEIKDQKMEQQQLRKEELEVFTNNGENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEK EMDYARDLQKKYLPSRIQIFPKLDYEILYRPLIQVGGDYYDYIDLGNNRYIFALGDVIGHGVKAAMMMTVLKVLFHQIAK TEPDPSQILLKMNEGIATHFPDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPECYEKLNPMFGMLPKFSPKVL EFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTMENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII >Mature_637_residues MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFEYDNALDWNQRFQLIRIQLLAIDIENQIQDQ LQKEFTNPKNKLESKKNSDEIRTFCKLDSSDSKQEVFFQMVRCHFSEEEQSYFLLSDGNGYRIYPSTFIEEALLDSPFSD PNEGLFLLNSKGDFGISGFIEDDFLVSEEWKEKTKSSLQTNSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLV LQPILSTLKTNLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNVLLENPHIEPTIQLKDVFIYQ DSFVLWLKKEVLVFLKEIKDQKMEQQQLRKEELEVFTNNGENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEK EMDYARDLQKKYLPSRIQIFPKLDYEILYRPLIQVGGDYYDYIDLGNNRYIFALGDVIGHGVKAAMMMTVLKVLFHQIAK TEPDPSQILLKMNEGIATHFPDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPECYEKLNPMFGMLPKFSPKVL EFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTMENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 74399; Mature: 74399
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFEYDNALDWNQR CCCHHHCCCHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH FQLIRIQLLAIDIENQIQDQLQKEFTNPKNKLESKKNSDEIRTFCKLDSSDSKQEVFFQM HEEEEEEEEEEEHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH VRCHFSEEEQSYFLLSDGNGYRIYPSTFIEEALLDSPFSDPNEGLFLLNSKGDFGISGFI HHHHCCCCCCCEEEEECCCCEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECEE EDDFLVSEEWKEKTKSSLQTNSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLV CCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCCEEEEEHHHHHHH LQPILSTLKTNLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCE LLENPHIEPTIQLKDVFIYQDSFVLWLKKEVLVFLKEIKDQKMEQQQLRKEELEVFTNNG EEECCCCCCEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC ENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEKEMDYARDLQKKYLPSRIQIF CEEEEEEEEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE PKLDYEILYRPLIQVGGDYYDYIDLGNNRYIFALGDVIGHGVKAAMMMTVLKVLFHQIAK CCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHC TEPDPSQILLKMNEGIATHFPDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPE CCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCHH CYEKLNPMFGMLPKFSPKVLEFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTM HHHHCCHHHHCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEC >Mature Secondary Structure MKTFLDKGRNVYSNFIYVIRTKSFYKLFLSLVLFIILPYSIIAGRMIYFEYDNALDWNQR CCCHHHCCCHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH FQLIRIQLLAIDIENQIQDQLQKEFTNPKNKLESKKNSDEIRTFCKLDSSDSKQEVFFQM HEEEEEEEEEEEHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHH VRCHFSEEEQSYFLLSDGNGYRIYPSTFIEEALLDSPFSDPNEGLFLLNSKGDFGISGFI HHHHCCCCCCCEEEEECCCCEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECEE EDDFLVSEEWKEKTKSSLQTNSNLPTLKEVRKDDLGFFLVGVPLYGLPIHLFVVSPINLV CCCCEECHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCCEEEEEHHHHHHH LQPILSTLKTNLTTLSGILLFTFFISFFISLKEIESKQKLKLILKEFPHAAILYDSTGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCE LLENPHIEPTIQLKDVFIYQDSFVLWLKKEVLVFLKEIKDQKMEQQQLRKEELEVFTNNG EEECCCCCCEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC ENLLLEITYQIWYLEQDHQSASGALILVQDVTKKRLEFEKEMDYARDLQKKYLPSRIQIF CEEEEEEEEEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE PKLDYEILYRPLIQVGGDYYDYIDLGNNRYIFALGDVIGHGVKAAMMMTVLKVLFHQIAK CCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHC TEPDPSQILLKMNEGIATHFPDPYAFVPFLFLLFDINQNFVYYGNAGHPGMVHFSKNGPE CCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCHH CYEKLNPMFGMLPKFSPKVLEFPITKGDRFYLFTDGLKDVENFKQEKLWENELMGFFHTM HHHHCCHHHHCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ENNHMSFIKQELDSKIRSFSEGKDLLDDITWIGIDII CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]