| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221151
Identifier: 183221151
GI number: 183221151
Start: 1842976
End: 1843722
Strand: Direct
Name: 183221151
Synonym: LEPBI_I1765
Alternate gene names: NA
Gene position: 1842976-1843722 (Clockwise)
Preceding gene: 183221149
Following gene: 183221156
Centisome position: 51.2
GC content: 39.76
Gene sequence:
>747_bases ATGAAAATTGGCATCGTAAAACACCTAAATGCAAGGCCACTTACCCTCTATTTTGAAAGATCCCCTGATTTTACTCCCGT ATATGAGAATCCAAGTGTCCTCATTGAACTTTTAAAAAAAGGGGAACTTGACTGCGCCCTCGTCTCTTCCATTGAATGTG AACGAAATCAAAACAAACTAGATTACACAAAAATTGTTGGAGTTTGCGCCAGGGACGTAGTGCGATCCGTTTTATTTTTT AAAAATGAAACAGAAACCGGGATCCCAGAAAAAGTGTTCACAGACATTGGGTCACGTTCGAGCGTTTGCCTTCTGCAATG CCTCTTCCATTTGGAATATGGAACGAAAGTGGAAGTGATCCCAACAGATGCCAAAGACATTTCCAAAATGATGGAAGAAG GAATTGGTTCCCATTTACTTTTTGGTGACCATGCACTTTTACAAACTCCTATCCCGAGTTACAAGGTGGTGGATCTTGCC GAATGGTGGCACAGAATCACTGGACTTTATTTTTGTTTTGCGTTTTGGGCTTATCCCAAGGGGAAAAAATGGGACCACCA AATCTTTTTAACTGCACTCGAATATGGGCTAAAGGAGCTAAATTCTATCATCAGTGAAGAAAAACGCCTTCCCATTGCCA TTACTGACCGCTATCTAAAACAAGAGTTACACTATATCCCCGAACAAAAAAATTTGGATGGGTTTCTACTTTTTATCAAA ACAGCAAAAGAATTAGGACTTTTATAA
Upstream 100 bases:
>100_bases GATTGTGTTTAAAGATGTTCGAAAGTCCAATTTGCCCTCACGAAGATTCAACAGTGTTTTTTGATTCTGACAAGTTGTTT TTTCCGAAGGAGGGTCAATC
Downstream 100 bases:
>100_bases TTAAAAAAATCGGATTTTGTATTCCCAAGTTTTAGCCTCAGGGTTTTCTAAAGTTTCTTGTAAAGGGATTTGATACACTA AATTTCCAAGTCCAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKIGIVKHLNARPLTLYFERSPDFTPVYENPSVLIELLKKGELDCALVSSIECERNQNKLDYTKIVGVCARDVVRSVLFF KNETETGIPEKVFTDIGSRSSVCLLQCLFHLEYGTKVEVIPTDAKDISKMMEEGIGSHLLFGDHALLQTPIPSYKVVDLA EWWHRITGLYFCFAFWAYPKGKKWDHQIFLTALEYGLKELNSIISEEKRLPIAITDRYLKQELHYIPEQKNLDGFLLFIK TAKELGLL
Sequences:
>Translated_248_residues MKIGIVKHLNARPLTLYFERSPDFTPVYENPSVLIELLKKGELDCALVSSIECERNQNKLDYTKIVGVCARDVVRSVLFF KNETETGIPEKVFTDIGSRSSVCLLQCLFHLEYGTKVEVIPTDAKDISKMMEEGIGSHLLFGDHALLQTPIPSYKVVDLA EWWHRITGLYFCFAFWAYPKGKKWDHQIFLTALEYGLKELNSIISEEKRLPIAITDRYLKQELHYIPEQKNLDGFLLFIK TAKELGLL >Mature_248_residues MKIGIVKHLNARPLTLYFERSPDFTPVYENPSVLIELLKKGELDCALVSSIECERNQNKLDYTKIVGVCARDVVRSVLFF KNETETGIPEKVFTDIGSRSSVCLLQCLFHLEYGTKVEVIPTDAKDISKMMEEGIGSHLLFGDHALLQTPIPSYKVVDLA EWWHRITGLYFCFAFWAYPKGKKWDHQIFLTALEYGLKELNSIISEEKRLPIAITDRYLKQELHYIPEQKNLDGFLLFIK TAKELGLL
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28505; Mature: 28505
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIVKHLNARPLTLYFERSPDFTPVYENPSVLIELLKKGELDCALVSSIECERNQNKL CCCCCEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHCCCCCCH DYTKIVGVCARDVVRSVLFFKNETETGIPEKVFTDIGSRSSVCLLQCLFHLEYGTKVEVI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEE PTDAKDISKMMEEGIGSHLLFGDHALLQTPIPSYKVVDLAEWWHRITGLYFCFAFWAYPK ECCHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC GKKWDHQIFLTALEYGLKELNSIISEEKRLPIAITDRYLKQELHYIPEQKNLDGFLLFIK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEE TAKELGLL EHHHHCCC >Mature Secondary Structure MKIGIVKHLNARPLTLYFERSPDFTPVYENPSVLIELLKKGELDCALVSSIECERNQNKL CCCCCEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHCCCCCCH DYTKIVGVCARDVVRSVLFFKNETETGIPEKVFTDIGSRSSVCLLQCLFHLEYGTKVEVI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEE PTDAKDISKMMEEGIGSHLLFGDHALLQTPIPSYKVVDLAEWWHRITGLYFCFAFWAYPK ECCHHHHHHHHHHCCCCEEEECCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC GKKWDHQIFLTALEYGLKELNSIISEEKRLPIAITDRYLKQELHYIPEQKNLDGFLLFIK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEE TAKELGLL EHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA