Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183221106

Identifier: 183221106

GI number: 183221106

Start: 1792283

End: 1793149

Strand: Direct

Name: 183221106

Synonym: LEPBI_I1720

Alternate gene names: NA

Gene position: 1792283-1793149 (Clockwise)

Preceding gene: 183221105

Following gene: 183221109

Centisome position: 49.79

GC content: 38.52

Gene sequence:

>867_bases
GTGATTAGTATGAAGCGAACATTTATTTTGATCTTTTTCTGTTTTGGAATCACAACATTTGCGAAACCCATTGAAGATAA
AGATATCTATTCGTCGGTTGTGAATTGGACAGAACAAGTCATTGTCTCTAGTGTCAAAGAAACCATTCCGAAAATTGTAT
TCGATGAAGATGATCCTGAATTTTTTGGCAAAAATACAGCAACGAGCCAAGGCAAATCCCATTCTATGGCGAGGAAAAAA
GCAAAAGAGAAACTAAAAGTAAGGCTTAGCCAGAGACTCGAATCAATGCTTTTTAACGCCGATTATACGATCTTTGAATA
TACCCAAGTCAACCAACAAGCTAGATTACGACTCAACTCCTATATAGGAGCGGAAAAAGAAGAATACGATTTCCAATTTG
TGAAAAATGTCTTAGAAGCTAAGGCAAGCCTACCGATCAAAGGAAAGGATGGGATCCTTGCCCATATACCGATGGAATAT
GGTACAGAACGAGTTCCTGAATTTAGCGAAGATATGATCCCAGTGGAATTTTCAGGCCTTGTCGTCGATGCAAGGCACCT
TTCAGTCAAAAGAGCTTTGTTTCCAAAAATACAAACGGATAGAGGCCTTGATGTTTATTCTCCCTTCTATGTGAAGGATG
CGTACGCTATCGAAACAGGATATATTGTCTATCGAGAAGATCAAAATGGAAAAACGTTTGAAAACAAGGTTGGAAAAAAT
CCTTACTTTGTATTAGCTTTATCGACGGCAGGAAAAAACCAAACAGACTTAGTGATTCCAACTGATGAGGCGGCTAAATT
TCTCAGCCACCCGGAATCCAGAAAAAACATCACACGTTGCAGAGTTTTGATTTTAGTTTCTCAGTAA

Upstream 100 bases:

>100_bases
CAAAATCCTATGGAAAAAACGTCTTGCAAAGTTTACCGAAAGGAGTTCCGCTCATTACGGAATTTAATGATTTAGAAAGA
AAATTCCATTTATTGCCGAA

Downstream 100 bases:

>100_bases
GAGACAAAAACATTTTTTCCGCTTTTCCATACTCACCATTGAATAGATAAGCAAAACCCATATCTTCTAAATCTTTGTGA
TTCAGGGTTGTTGATTTTTT

Product: putative signal peptide

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPEFFGKNTATSQGKSHSMARKK
AKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEY
GTERVPEFSEDMIPVEFSGLVVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN
PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ

Sequences:

>Translated_288_residues
MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPEFFGKNTATSQGKSHSMARKK
AKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEY
GTERVPEFSEDMIPVEFSGLVVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN
PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ
>Mature_288_residues
MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPEFFGKNTATSQGKSHSMARKK
AKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEY
GTERVPEFSEDMIPVEFSGLVVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN
PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32933; Mature: 32933

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
FFGKNTATSQGKSHSMARKKAKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNS
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHH
YIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEYGTERVPEFSEDMIPVEFSGL
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCCHHHCCCCEEECCE
VVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN
EEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEECEEEEEECCCCCHHHHHCCCC
PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ
CEEEEEEECCCCCCCEEEEECHHHHHHHCCCHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
FFGKNTATSQGKSHSMARKKAKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNS
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHH
YIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEYGTERVPEFSEDMIPVEFSGL
HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCCHHHCCCCEEECCE
VVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN
EEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEECEEEEEECCCCCHHHHHCCCC
PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ
CEEEEEEECCCCCCCEEEEECHHHHHHHCCCHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA