| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221106
Identifier: 183221106
GI number: 183221106
Start: 1792283
End: 1793149
Strand: Direct
Name: 183221106
Synonym: LEPBI_I1720
Alternate gene names: NA
Gene position: 1792283-1793149 (Clockwise)
Preceding gene: 183221105
Following gene: 183221109
Centisome position: 49.79
GC content: 38.52
Gene sequence:
>867_bases GTGATTAGTATGAAGCGAACATTTATTTTGATCTTTTTCTGTTTTGGAATCACAACATTTGCGAAACCCATTGAAGATAA AGATATCTATTCGTCGGTTGTGAATTGGACAGAACAAGTCATTGTCTCTAGTGTCAAAGAAACCATTCCGAAAATTGTAT TCGATGAAGATGATCCTGAATTTTTTGGCAAAAATACAGCAACGAGCCAAGGCAAATCCCATTCTATGGCGAGGAAAAAA GCAAAAGAGAAACTAAAAGTAAGGCTTAGCCAGAGACTCGAATCAATGCTTTTTAACGCCGATTATACGATCTTTGAATA TACCCAAGTCAACCAACAAGCTAGATTACGACTCAACTCCTATATAGGAGCGGAAAAAGAAGAATACGATTTCCAATTTG TGAAAAATGTCTTAGAAGCTAAGGCAAGCCTACCGATCAAAGGAAAGGATGGGATCCTTGCCCATATACCGATGGAATAT GGTACAGAACGAGTTCCTGAATTTAGCGAAGATATGATCCCAGTGGAATTTTCAGGCCTTGTCGTCGATGCAAGGCACCT TTCAGTCAAAAGAGCTTTGTTTCCAAAAATACAAACGGATAGAGGCCTTGATGTTTATTCTCCCTTCTATGTGAAGGATG CGTACGCTATCGAAACAGGATATATTGTCTATCGAGAAGATCAAAATGGAAAAACGTTTGAAAACAAGGTTGGAAAAAAT CCTTACTTTGTATTAGCTTTATCGACGGCAGGAAAAAACCAAACAGACTTAGTGATTCCAACTGATGAGGCGGCTAAATT TCTCAGCCACCCGGAATCCAGAAAAAACATCACACGTTGCAGAGTTTTGATTTTAGTTTCTCAGTAA
Upstream 100 bases:
>100_bases CAAAATCCTATGGAAAAAACGTCTTGCAAAGTTTACCGAAAGGAGTTCCGCTCATTACGGAATTTAATGATTTAGAAAGA AAATTCCATTTATTGCCGAA
Downstream 100 bases:
>100_bases GAGACAAAAACATTTTTTCCGCTTTTCCATACTCACCATTGAATAGATAAGCAAAACCCATATCTTCTAAATCTTTGTGA TTCAGGGTTGTTGATTTTTT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPEFFGKNTATSQGKSHSMARKK AKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEY GTERVPEFSEDMIPVEFSGLVVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ
Sequences:
>Translated_288_residues MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPEFFGKNTATSQGKSHSMARKK AKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEY GTERVPEFSEDMIPVEFSGLVVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ >Mature_288_residues MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPEFFGKNTATSQGKSHSMARKK AKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNSYIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEY GTERVPEFSEDMIPVEFSGLVVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32933; Mature: 32933
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPE CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH FFGKNTATSQGKSHSMARKKAKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNS HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHH YIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEYGTERVPEFSEDMIPVEFSGL HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCCHHHCCCCEEECCE VVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN EEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEECEEEEEECCCCCHHHHHCCCC PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ CEEEEEEECCCCCCCEEEEECHHHHHHHCCCHHHCCCEEEEEEEEECC >Mature Secondary Structure MISMKRTFILIFFCFGITTFAKPIEDKDIYSSVVNWTEQVIVSSVKETIPKIVFDEDDPE CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH FFGKNTATSQGKSHSMARKKAKEKLKVRLSQRLESMLFNADYTIFEYTQVNQQARLRLNS HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHHHHHHHH YIGAEKEEYDFQFVKNVLEAKASLPIKGKDGILAHIPMEYGTERVPEFSEDMIPVEFSGL HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCCHHHCCCCEEECCE VVDARHLSVKRALFPKIQTDRGLDVYSPFYVKDAYAIETGYIVYREDQNGKTFENKVGKN EEEHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEECEEEEEECCCCCHHHHHCCCC PYFVLALSTAGKNQTDLVIPTDEAAKFLSHPESRKNITRCRVLILVSQ CEEEEEEECCCCCCCEEEEECHHHHHHHCCCHHHCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA