| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220937
Identifier: 183220937
GI number: 183220937
Start: 1617762
End: 1618493
Strand: Reverse
Name: 183220937
Synonym: LEPBI_I1550
Alternate gene names: NA
Gene position: 1618493-1617762 (Counterclockwise)
Preceding gene: 183220938
Following gene: 183220934
Centisome position: 44.96
GC content: 40.57
Gene sequence:
>732_bases ATGATTCATTTAGCAAAAAAAACAAAAGCCAAACTAAAAAACCAAACTCCCGATGAATGGGAAATACATGATCTTTGGAA TCGATTGGAATCCAAAGGACTCTTCCAAAATGAGGCAGTCAGTTTGTCTTTTTTATTACCTGGCTTGGGTCAGTTCATAA TCATGGTGAAAGGGGAAGGAAAAAAATCAAAACCAATGGTTTGGATCCATTCGATACAGAATCCAAACACCATGGTTGGT GATAAAAACGATATCCACTTCCTTCCTTCTCTCATTCGTTTTCATGCAGACCTATACTCGGAGCGCCCCGATGTAGGTGC CATCGTACGATTTTCACCGCCTTGGAGTTCCAAACTTTCCTACTTGGACCACCCTCTCCCACTTGTATTTGATGAACAAT GCAGGCAGTTAGGTGCGAGTGTGAACCAATTACCTCTCGATTCCAATGGGAAATTATTACCAAGCCCAGTCTTACATTCA GGTGCCAATGGTTTTCTTTTAGGAGAAGAAGTGGTGATCACAAGTGTCACTCGTGAAAAGGCCATTTATAATTGTGAATT GATCGAAAAATGTGCCAAGGCATATCTTTTAGCGATTGCCACTGGTGGTAGCGTTCGAAAGATTCCGTGGTTTGTTCGTT TCATTGCAAAAAGTCGCTTATTAAAAGACGAAAAAAAAGCAATGGAATTTTACAAACGAGGAGAAAGGCCAACAGGATTC AAAGCTTACTAA
Upstream 100 bases:
>100_bases CGTTGTGGCCAACTACCCTGCCCCACTGGTGAAACAAATCAATTCTGTTTTTACCACATAAGTTACTTTCAGAAAACCGA GGAAAGGAAGATCTGCAATC
Downstream 100 bases:
>100_bases CGTAAACCTTCAATTTCCAATGCGAAAAAAAACGTTTGGATTCAAAATCGAATTTGAATTTATTTTTTTTGAATTTCTTC CGGCCATTCTGCTTTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIHLAKKTKAKLKNQTPDEWEIHDLWNRLESKGLFQNEAVSLSFLLPGLGQFIIMVKGEGKKSKPMVWIHSIQNPNTMVG DKNDIHFLPSLIRFHADLYSERPDVGAIVRFSPPWSSKLSYLDHPLPLVFDEQCRQLGASVNQLPLDSNGKLLPSPVLHS GANGFLLGEEVVITSVTREKAIYNCELIEKCAKAYLLAIATGGSVRKIPWFVRFIAKSRLLKDEKKAMEFYKRGERPTGF KAY
Sequences:
>Translated_243_residues MIHLAKKTKAKLKNQTPDEWEIHDLWNRLESKGLFQNEAVSLSFLLPGLGQFIIMVKGEGKKSKPMVWIHSIQNPNTMVG DKNDIHFLPSLIRFHADLYSERPDVGAIVRFSPPWSSKLSYLDHPLPLVFDEQCRQLGASVNQLPLDSNGKLLPSPVLHS GANGFLLGEEVVITSVTREKAIYNCELIEKCAKAYLLAIATGGSVRKIPWFVRFIAKSRLLKDEKKAMEFYKRGERPTGF KAY >Mature_243_residues MIHLAKKTKAKLKNQTPDEWEIHDLWNRLESKGLFQNEAVSLSFLLPGLGQFIIMVKGEGKKSKPMVWIHSIQNPNTMVG DKNDIHFLPSLIRFHADLYSERPDVGAIVRFSPPWSSKLSYLDHPLPLVFDEQCRQLGASVNQLPLDSNGKLLPSPVLHS GANGFLLGEEVVITSVTREKAIYNCELIEKCAKAYLLAIATGGSVRKIPWFVRFIAKSRLLKDEKKAMEFYKRGERPTGF KAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27489; Mature: 27489
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLAKKTKAKLKNQTPDEWEIHDLWNRLESKGLFQNEAVSLSFLLPGLGQFIIMVKGEG CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEEEECCC KKSKPMVWIHSIQNPNTMVGDKNDIHFLPSLIRFHADLYSERPDVGAIVRFSPPWSSKLS CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH YLDHPLPLVFDEQCRQLGASVNQLPLDSNGKLLPSPVLHSGANGFLLGEEVVITSVTREK HHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCEEEEEHHHHH AIYNCELIEKCAKAYLLAIATGGSVRKIPWFVRFIAKSRLLKDEKKAMEFYKRGERPTGF HHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KAY CCC >Mature Secondary Structure MIHLAKKTKAKLKNQTPDEWEIHDLWNRLESKGLFQNEAVSLSFLLPGLGQFIIMVKGEG CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEEEECCC KKSKPMVWIHSIQNPNTMVGDKNDIHFLPSLIRFHADLYSERPDVGAIVRFSPPWSSKLS CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH YLDHPLPLVFDEQCRQLGASVNQLPLDSNGKLLPSPVLHSGANGFLLGEEVVITSVTREK HHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCEEECCCEEEEEHHHHH AIYNCELIEKCAKAYLLAIATGGSVRKIPWFVRFIAKSRLLKDEKKAMEFYKRGERPTGF HHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KAY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA