| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fabG [H]
Identifier: 183220934
GI number: 183220934
Start: 1612096
End: 1612884
Strand: Reverse
Name: fabG [H]
Synonym: LEPBI_I1547
Alternate gene names: 183220934
Gene position: 1612884-1612096 (Counterclockwise)
Preceding gene: 183220937
Following gene: 183220932
Centisome position: 44.81
GC content: 42.97
Gene sequence:
>789_bases TTGCCATCCCATCACTTTCTAAAAAATCATTATGGAATGGATCAAAGTTTATTTGGGAAAAACGCAATTGTGACAGGTGG TGCCTTAGGCATTGGAAAAGAAACATCTCTCCTTCTTGCAAAAAAAGGGGCTCATGTAGTTGTCTCCGATATTAAAGTCG ATGAAGGGAATTCATTAGTCAAAGAAATCCAAAGTTTTGGTGGTTCTTGCGAATTTGTAACTTGTGATGTGAGTAAGGAA GAAGACATCATACGTTTGACAGACCATTTGCAAAATCAAAACAAACGCCTAGACATCATGGTGAATAACGCAGGGATAGC CAATAAACCCACCTTCATGCATAAAGTATCAACCGAAGTTTGGAACAAACTCATCCTAATGGACCTAACGAGCGTATTCT GGTCTCAAAAGTATGCTACAAAACAGATGCTTTCCGATCGTAAAGGAGGTTCTATCATCAATGTAGCATCCATCGCCGGC CTTGGTGCTTCCCCTTCCCTTGGACCTTATTGTGTGGCAAAGGCAGGTGTGATTGAACTTTCTACAACTGGCGCTTTAGA AGTTGCCAAGTTTGGTGTCAGGATCAATGCCGTTTGTCCGGGTTGGACAGAAACTGCGATCCTTGATGTGGCAGGCGAAC GGGGAAAATCGGCAATGGAAAAAAACATCCCGATCGGAAGGCTCGGAAAACCATTCGAAGTGGCGAATCTTATTGTTTTT TTGGCATCAGATGATTCGAGTTTTATCACAGGATCGGTGTATCGTGTGGATGGGGGAACTAGGAGTTAG
Upstream 100 bases:
>100_bases TAGGCAATTGTTTCCCAATTTTAGTTCCGCTCGAAAATGAAATGAATGTTTTTGTGAACCGATCGGTATACTTATCAACT AACATCCATTTTAAATCTTC
Downstream 100 bases:
>100_bases GTTAGTTCCTTTCCTAGTCATCGCGAAAAAATATGAATACGCAAATGTTGTTTCAATTCTTTCTAAGATATGAAACCAAG CATACAATCAATATTGTAAT
Product: putative short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPSHHFLKNHYGMDQSLFGKNAIVTGGALGIGKETSLLLAKKGAHVVVSDIKVDEGNSLVKEIQSFGGSCEFVTCDVSKE EDIIRLTDHLQNQNKRLDIMVNNAGIANKPTFMHKVSTEVWNKLILMDLTSVFWSQKYATKQMLSDRKGGSIINVASIAG LGASPSLGPYCVAKAGVIELSTTGALEVAKFGVRINAVCPGWTETAILDVAGERGKSAMEKNIPIGRLGKPFEVANLIVF LASDDSSFITGSVYRVDGGTRS
Sequences:
>Translated_262_residues MPSHHFLKNHYGMDQSLFGKNAIVTGGALGIGKETSLLLAKKGAHVVVSDIKVDEGNSLVKEIQSFGGSCEFVTCDVSKE EDIIRLTDHLQNQNKRLDIMVNNAGIANKPTFMHKVSTEVWNKLILMDLTSVFWSQKYATKQMLSDRKGGSIINVASIAG LGASPSLGPYCVAKAGVIELSTTGALEVAKFGVRINAVCPGWTETAILDVAGERGKSAMEKNIPIGRLGKPFEVANLIVF LASDDSSFITGSVYRVDGGTRS >Mature_261_residues PSHHFLKNHYGMDQSLFGKNAIVTGGALGIGKETSLLLAKKGAHVVVSDIKVDEGNSLVKEIQSFGGSCEFVTCDVSKEE DIIRLTDHLQNQNKRLDIMVNNAGIANKPTFMHKVSTEVWNKLILMDLTSVFWSQKYATKQMLSDRKGGSIINVASIAGL GASPSLGPYCVAKAGVIELSTTGALEVAKFGVRINAVCPGWTETAILDVAGERGKSAMEKNIPIGRLGKPFEVANLIVFL ASDDSSFITGSVYRVDGGTRS
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=35.8565737051793, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=33.8983050847458, Blast_Score=124, Evalue=9e-29, Organism=Homo sapiens, GI15277342, Length=246, Percent_Identity=32.9268292682927, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=33.7254901960784, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=30.5555555555556, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI59889578, Length=225, Percent_Identity=31.1111111111111, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI31542939, Length=254, Percent_Identity=30.3149606299213, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=29.8039215686275, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=29.4573643410853, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=31.2, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI126723191, Length=201, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4503301, Length=249, Percent_Identity=32.1285140562249, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=29.2490118577075, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.8080808080808, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI209862901, Length=204, Percent_Identity=29.9019607843137, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI19923983, Length=204, Percent_Identity=29.9019607843137, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=28.2945736434109, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI210032110, Length=194, Percent_Identity=26.2886597938144, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=31.2138728323699, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI40807363, Length=196, Percent_Identity=25, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI4504505, Length=250, Percent_Identity=27.2, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI25282469, Length=239, Percent_Identity=23.4309623430962, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=27.1604938271605, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI10190704, Length=259, Percent_Identity=23.9382239382239, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI142976729, Length=233, Percent_Identity=23.6051502145923, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=32.0158102766798, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=32.7800829875519, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=35.1020408163265, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=30.4878048780488, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=32.2175732217573, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=32.3770491803279, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=31.5789473684211, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=31.4516129032258, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=31.7460317460317, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=27.843137254902, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=25.3968253968254, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787526, Length=264, Percent_Identity=24.6212121212121, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=24.0816326530612, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=38.5542168674699, Blast_Score=141, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=33.4630350194552, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=33.4661354581673, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=31.0077519379845, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=34.8659003831418, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=33.5907335907336, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=31.2741312741313, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=32.9501915708812, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=31.7460317460317, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=31.7647058823529, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=31.2741312741313, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=30.1587301587302, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562908, Length=259, Percent_Identity=31.2741312741313, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=30.859375, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=29.3877551020408, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=32.4110671936759, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=33.587786259542, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=30.1158301158301, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=33.8403041825095, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=31.3953488372093, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=29.8804780876494, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=29.2307692307692, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=29.5880149812734, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=30.9160305343511, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=29.6747967479675, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17564282, Length=207, Percent_Identity=28.5024154589372, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560332, Length=260, Percent_Identity=30, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=28.6259541984733, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193203117, Length=193, Percent_Identity=28.4974093264249, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=28.4974093264249, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=29.9625468164794, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=27.6119402985075, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17568967, Length=237, Percent_Identity=30.8016877637131, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17508895, Length=204, Percent_Identity=28.4313725490196, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=31.7269076305221, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567345, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555612, Length=250, Percent_Identity=29.6, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=250, Percent_Identity=28.4, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=237, Percent_Identity=27.4261603375527, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=25.9109311740891, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=31.5789473684211, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=33.8709677419355, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=32.4, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=33.8775510204082, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI28571526, Length=244, Percent_Identity=34.0163934426229, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=32.4, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=31.5175097276265, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24644337, Length=263, Percent_Identity=33.0798479087452, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24640492, Length=159, Percent_Identity=32.7044025157233, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24649181, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI161076933, Length=191, Percent_Identity=28.7958115183246, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24584748, Length=191, Percent_Identity=28.7958115183246, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI18859837, Length=244, Percent_Identity=29.9180327868852, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24584744, Length=194, Percent_Identity=27.8350515463918, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574402, Length=194, Percent_Identity=27.8350515463918, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364892, Length=160, Percent_Identity=29.375, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640442, Length=200, Percent_Identity=29, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24580925, Length=246, Percent_Identity=27.2357723577236, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221331218, Length=253, Percent_Identity=28.4584980237154, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24665243, Length=253, Percent_Identity=28.4584980237154, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28075; Mature: 27943
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHHFLKNHYGMDQSLFGKNAIVTGGALGIGKETSLLLAKKGAHVVVSDIKVDEGNSLV CCCCCCHHHHCCCCHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEEEECCCCHHH KEIQSFGGSCEFVTCDVSKEEDIIRLTDHLQNQNKRLDIMVNNAGIANKPTFMHKVSTEV HHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH WNKLILMDLTSVFWSQKYATKQMLSDRKGGSIINVASIAGLGASPSLGPYCVAKAGVIEL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCCCCEEEECCCEEEE STTGALEVAKFGVRINAVCPGWTETAILDVAGERGKSAMEKNIPIGRLGKPFEVANLIVF ECCCCEEEEEECEEEEEECCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEEEEE LASDDSSFITGSVYRVDGGTRS EECCCCCEEEEEEEEECCCCCC >Mature Secondary Structure PSHHFLKNHYGMDQSLFGKNAIVTGGALGIGKETSLLLAKKGAHVVVSDIKVDEGNSLV CCCCCHHHHCCCCHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEEEECCCCHHH KEIQSFGGSCEFVTCDVSKEEDIIRLTDHLQNQNKRLDIMVNNAGIANKPTFMHKVSTEV HHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH WNKLILMDLTSVFWSQKYATKQMLSDRKGGSIINVASIAGLGASPSLGPYCVAKAGVIEL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCCCCEEEECCCEEEE STTGALEVAKFGVRINAVCPGWTETAILDVAGERGKSAMEKNIPIGRLGKPFEVANLIVF ECCCCEEEEEECEEEEEECCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEEEEEE LASDDSSFITGSVYRVDGGTRS EECCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]