Click here to switch to the map view.

The map label for this gene is dedA [C]

Identifier: 183220866

GI number: 183220866

Start: 1538208

End: 1538828

Strand: Reverse

Name: dedA [C]

Synonym: LEPBI_I1479

Alternate gene names: 183220866

Gene position: 1538828-1538208 (Counterclockwise)

Preceding gene: 183220869

Following gene: 183220865

Centisome position: 42.75

GC content: 43.96

Gene sequence:

>621_bases
ATGGACTTTCTACAAACCTTAGTTTCCATTTTTATGCAATACGGTTATTTTGCCGTTTTCGGAATTCTGATCCTCTGCGG
ATTTGGTCTCCCAGTACCGGAAGACATCTCACTCACTGCCGGTGGAGTGATTTCGGGACTTGGTTATGCGAATGTCCATA
TCATGTTTCTCGTCGGCATGGCGGGAGTCCTTCTCGGAGACTCGTTTGTATTTTGGCTCGGAAGCCATTACGGGGAAAGG
GCGCTGAGTTTACCCGTTTTACGTACCGTTTTACACCCAGAACGATTTGACAAAGTGCGAGAACAGTTCAAAAAATATGG
TCGTTGGGTCGTGTTTGTAGGTCGATTTATGCCAGGCCTTCGGATGCCCATTTTTTTTACGGCGGGTACTTCCAAACAAA
TTAGTTTTTTCTTATTTTTACTTACAGATGGATTTGCTGCCCTCATCTCAGTCCCGATTTGGGTGTATTTAGGTTATTAT
TTTGCTCATAATTTTGACGAACTGATGGGTTGGGTCCGAGGGGGACAAACCTTAATCCTCATCCTTGTATTTTTACTCAT
TGGCATTTTGGTTTTCTTCTGGTGGCGGAGGAAACACCGAGAAGGAAAGGGAAAAAAATGA

Upstream 100 bases:

>100_bases
TGCAAGGATTTTTTCTTCATCGTTTAGGAGTTCGTTTCTCCCTTTCTTCATAAATCTCTTTCCTTTTTCGACGAAACCAT
AAAATCAGTATAAATCCCTC

Downstream 100 bases:

>100_bases
ATCCAATCCACTCGTTTTTTGTTTCCTTTTTTTTCCTTACCTTTGTTTGGTTCTGGAACTGCACCAACTATTCCACCACT
ACCTCCGTCCAGGCACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDFLQTLVSIFMQYGYFAVFGILILCGFGLPVPEDISLTAGGVISGLGYANVHIMFLVGMAGVLLGDSFVFWLGSHYGER
ALSLPVLRTVLHPERFDKVREQFKKYGRWVVFVGRFMPGLRMPIFFTAGTSKQISFFLFLLTDGFAALISVPIWVYLGYY
FAHNFDELMGWVRGGQTLILILVFLLIGILVFFWWRRKHREGKGKK

Sequences:

>Translated_206_residues
MDFLQTLVSIFMQYGYFAVFGILILCGFGLPVPEDISLTAGGVISGLGYANVHIMFLVGMAGVLLGDSFVFWLGSHYGER
ALSLPVLRTVLHPERFDKVREQFKKYGRWVVFVGRFMPGLRMPIFFTAGTSKQISFFLFLLTDGFAALISVPIWVYLGYY
FAHNFDELMGWVRGGQTLILILVFLLIGILVFFWWRRKHREGKGKK
>Mature_206_residues
MDFLQTLVSIFMQYGYFAVFGILILCGFGLPVPEDISLTAGGVISGLGYANVHIMFLVGMAGVLLGDSFVFWLGSHYGER
ALSLPVLRTVLHPERFDKVREQFKKYGRWVVFVGRFMPGLRMPIFFTAGTSKQISFFLFLLTDGFAALISVPIWVYLGYY
FAHNFDELMGWVRGGQTLILILVFLLIGILVFFWWRRKHREGKGKK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23484; Mature: 23484

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLQTLVSIFMQYGYFAVFGILILCGFGLPVPEDISLTAGGVISGLGYANVHIMFLVGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHH
AGVLLGDSFVFWLGSHYGERALSLPVLRTVLHPERFDKVREQFKKYGRWVVFVGRFMPGL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEHHHHCCCC
RMPIFFTAGTSKQISFFLFLLTDGFAALISVPIWVYLGYYFAHNFDELMGWVRGGQTLIL
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
ILVFLLIGILVFFWWRRKHREGKGKK
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDFLQTLVSIFMQYGYFAVFGILILCGFGLPVPEDISLTAGGVISGLGYANVHIMFLVGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHH
AGVLLGDSFVFWLGSHYGERALSLPVLRTVLHPERFDKVREQFKKYGRWVVFVGRFMPGL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEHHHHCCCC
RMPIFFTAGTSKQISFFLFLLTDGFAALISVPIWVYLGYYFAHNFDELMGWVRGGQTLIL
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
ILVFLLIGILVFFWWRRKHREGKGKK
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]