| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220865
Identifier: 183220865
GI number: 183220865
Start: 1537732
End: 1538211
Strand: Reverse
Name: 183220865
Synonym: LEPBI_I1478
Alternate gene names: NA
Gene position: 1538211-1537732 (Counterclockwise)
Preceding gene: 183220866
Following gene: 183220864
Centisome position: 42.73
GC content: 49.38
Gene sequence:
>480_bases ATGAATCCAATCCACTCGTTTTTTGTTTCCTTTTTTTTCCTTACCTTTGTTTGGTTCTGGAACTGCACCAACTATTCCAC CACTACCTCCGTCCAGGCACCGCCCACTCTCGTTTCGATCACCAATAATGGAAATTCCAATTTTACGATCAAAGTAAGAG CCCAAAATCCGGAATTCATCTTCCAAGGGTACAGGCTCTACCAGGCCGCAACAGAGAGTCTTGCCCAAAATCCGACCGAC ACGAACATAGGTGCCGATTGTCTCTTGGCCCAGGCCGCCGTTGTCCAGCCGGTAGAGTATACGTTTGAAGTGGATCCGTC GTCAAACCCCAATACGGCGGGAGTTTCTTGTCGCATTTTTGCCACACTTACCCCAGGATCCTATATTTCGATGCGGACAC TGGGGATTGCGGTGAATTTGGCAAATAGCACCAGTTCGTACCGAGTCTCCCTCCCCTCCAACGCGCTTATTGTCCCATAA
Upstream 100 bases:
>100_bases GAGGGGGACAAACCTTAATCCTCATCCTTGTATTTTTACTCATTGGCATTTTGGTTTTCTTCTGGTGGCGGAGGAAACAC CGAGAAGGAAAGGGAAAAAA
Downstream 100 bases:
>100_bases AATAAAACTTTCTTGCATTTAAGTCAAATGCGTGTATTTTTTTCCGGAATCATGGGATTTCTTTGTGCTTTTTTTAGAAT TTCTCTAAATTTTTGCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNPIHSFFVSFFFLTFVWFWNCTNYSTTTSVQAPPTLVSITNNGNSNFTIKVRAQNPEFIFQGYRLYQAATESLAQNPTD TNIGADCLLAQAAVVQPVEYTFEVDPSSNPNTAGVSCRIFATLTPGSYISMRTLGIAVNLANSTSSYRVSLPSNALIVP
Sequences:
>Translated_159_residues MNPIHSFFVSFFFLTFVWFWNCTNYSTTTSVQAPPTLVSITNNGNSNFTIKVRAQNPEFIFQGYRLYQAATESLAQNPTD TNIGADCLLAQAAVVQPVEYTFEVDPSSNPNTAGVSCRIFATLTPGSYISMRTLGIAVNLANSTSSYRVSLPSNALIVP >Mature_159_residues MNPIHSFFVSFFFLTFVWFWNCTNYSTTTSVQAPPTLVSITNNGNSNFTIKVRAQNPEFIFQGYRLYQAATESLAQNPTD TNIGADCLLAQAAVVQPVEYTFEVDPSSNPNTAGVSCRIFATLTPGSYISMRTLGIAVNLANSTSSYRVSLPSNALIVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17381; Mature: 17381
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIHSFFVSFFFLTFVWFWNCTNYSTTTSVQAPPTLVSITNNGNSNFTIKVRAQNPEFI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEE FQGYRLYQAATESLAQNPTDTNIGADCLLAQAAVVQPVEYTFEVDPSSNPNTAGVSCRIF EHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEE ATLTPGSYISMRTLGIAVNLANSTSSYRVSLPSNALIVP EEECCCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEC >Mature Secondary Structure MNPIHSFFVSFFFLTFVWFWNCTNYSTTTSVQAPPTLVSITNNGNSNFTIKVRAQNPEFI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEE FQGYRLYQAATESLAQNPTDTNIGADCLLAQAAVVQPVEYTFEVDPSSNPNTAGVSCRIF EHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEE ATLTPGSYISMRTLGIAVNLANSTSSYRVSLPSNALIVP EEECCCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA