| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220819
Identifier: 183220819
GI number: 183220819
Start: 1494881
End: 1495285
Strand: Reverse
Name: 183220819
Synonym: LEPBI_I1431
Alternate gene names: NA
Gene position: 1495285-1494881 (Counterclockwise)
Preceding gene: 183220820
Following gene: 183220818
Centisome position: 41.54
GC content: 41.73
Gene sequence:
>405_bases ATGGCAATAGGTAAGGATTCCATCAACAGCGTTATCGGACCAGGGTCGATATTTGAAGGTAAATTTTATATCGCAGGTTC ACTTAGAATCGATGGAAAATTCGAAGGTGATATCAAAACAGAAGATGCACTCGTCATTGGAGAGACAGGAAAGGTCAAAA CCAATATCAGCGCGAGAGAAGTCATTGTCTCCGGAACCCTCATTGGCAACATCAAAGCCGAAAACGAAGTGAAACTGGAA GGAACAGGCCGTATGTTAGGTGACATCACTGCTCCCTATTTAGAACTTCAAAAAGGTGTTGTTGCGAAAGGAAATATCAC AATCACAGGCGGACAGAAAAAAGACGTTCGTAAGATTGTAGAAGAATCCTTTGGCGGAATCAAATCTTTAGATTCGAAGG ACTAA
Upstream 100 bases:
>100_bases AAAAATCGGTCTTTAGCGGAGATGAGGAAATTGACTACTAAAAAGGCTTGTCAGATAGACCGAAAATTTTGATTCTCACA GAAGGGGAAAAGGAGCAGGA
Downstream 100 bases:
>100_bases CGTAATTTCCATTTAACACATGCTACTTCGTTCACCTGAAAAGTCTACGATCGGCAAGCATGTGTTACGTTGGGGAAACA TCAATGTCATCCAAGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAIGKDSINSVIGPGSIFEGKFYIAGSLRIDGKFEGDIKTEDALVIGETGKVKTNISAREVIVSGTLIGNIKAENEVKLE GTGRMLGDITAPYLELQKGVVAKGNITITGGQKKDVRKIVEESFGGIKSLDSKD
Sequences:
>Translated_134_residues MAIGKDSINSVIGPGSIFEGKFYIAGSLRIDGKFEGDIKTEDALVIGETGKVKTNISAREVIVSGTLIGNIKAENEVKLE GTGRMLGDITAPYLELQKGVVAKGNITITGGQKKDVRKIVEESFGGIKSLDSKD >Mature_133_residues AIGKDSINSVIGPGSIFEGKFYIAGSLRIDGKFEGDIKTEDALVIGETGKVKTNISAREVIVSGTLIGNIKAENEVKLEG TGRMLGDITAPYLELQKGVVAKGNITITGGQKKDVRKIVEESFGGIKSLDSKD
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14156; Mature: 14025
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGKDSINSVIGPGSIFEGKFYIAGSLRIDGKFEGDIKTEDALVIGETGKVKTNISARE CCCCCCCCHHCCCCCCEECCEEEEEEEEEECCEECCCCCCCCEEEEECCCCEEECCCCCE VIVSGTLIGNIKAENEVKLEGTGRMLGDITAPYLELQKGVVAKGNITITGGQKKDVRKIV EEEECEEEECEECCCEEEEEECCCEECCCCCCHHHHHCCEEECCCEEEECCCHHHHHHHH EESFGGIKSLDSKD HHHCCCCCCCCCCC >Mature Secondary Structure AIGKDSINSVIGPGSIFEGKFYIAGSLRIDGKFEGDIKTEDALVIGETGKVKTNISARE CCCCCCCHHCCCCCCEECCEEEEEEEEEECCEECCCCCCCCEEEEECCCCEEECCCCCE VIVSGTLIGNIKAENEVKLEGTGRMLGDITAPYLELQKGVVAKGNITITGGQKKDVRKIV EEEECEEEECEECCCEEEEEECCCEECCCCCCHHHHHCCEEECCCEEEECCCHHHHHHHH EESFGGIKSLDSKD HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA