| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220804
Identifier: 183220804
GI number: 183220804
Start: 1475003
End: 1476904
Strand: Reverse
Name: 183220804
Synonym: LEPBI_I1415
Alternate gene names: NA
Gene position: 1476904-1475003 (Counterclockwise)
Preceding gene: 183220806
Following gene: 183220798
Centisome position: 41.03
GC content: 42.53
Gene sequence:
>1902_bases ATGTCCCAAATGATCGATCCGATTTCCAGTGAAATTTTTGAACGAAAGCCCTACTTACGAAATTATTTCAAAAACTTCCT CTCAAAAAATCGATGGGAACTAGCTCCCGCAAAGAAAAATGGGGAATATTATGTCTCATTAGATGGAAATCCACTCTCTT CTTCCTTTTCCCCCCTAACACAGGCAAAACGACTCGTCGATTCGTATTCGTTAAGACCAACAGATGTTGTGATTTTACTT GGTTTAGGGAATCCGCACCTTATACCACTTATCAGTGAAGCATTGGCCCCCGGGCAAATCCTTATCCTGATCGGAGAAGA TGAAAGTTTAACCCCTGTTTTGTGGGATTTGTTTTTAAAACCCATCTTACAAGTGCCTGGTCGTCACCTCTTTAGTGGAG AAATGTTTTATCCCTTATTTTTTAACTACTTAGAATCACTTCCGATCGAAAGGGTGAGTGGACTAAAGGTCATACGTAAC CCAACAGACACAAATCGAAATCCAATTTATAAAGAACTAGAAGAAAAAACGCAAAACGTATTTTCGGCGAAAATGAGTGA CTTACTCACCAAGTTTGAATTTGAAAGGTTATGGATCAAAAATAGTATCTTTAACCTTGTCAAAGCCGAAACCCTCCCAC CTGTTAAGTTTCCCATTTCGATGTTACGAGACAAGTTCCAAGGTCTCAACGCCGTACTCGTGTCAGCTGGCCCCAGTTTA CGAAAAAACTTACCTTGGTTACAGGAAGTCCGTGACAAACTGTTTGTTTTCTCATGTGATACCTCACTAAAGGTCCTTTT AAAGGCAGGGATCCAACCCGATGGTGTTGTGACACTCGATGCCCAAACCAATTCCTTTTTCCATTTTATGGGAGAGTCTC TGACTCTAATCCCACTCTTTGCAGATCTTGTCAGTTCCCCTACCTTGTTACGAGAACCGATGTTCCAAACGGTTGTACAT TCTGTTACAGCCAAATACCAAGTGGATGCGGAAGGCTCACTTGTCCGGGAAGTGACAGCTGGGGGAGAACTTGCCGAACA AGTGTTCCAAGATGTGGGTGACATCCAATCAGGAGGGTCTGTTGCCACAACCGCCTTTGATATGTTACGGTATATGGGGT TTGGAACCGTTTATTTTCTTGGCCAAGACCTCGCCTATTCAGGTCGTGAGATCCATTCCACAGGCACCCATCACAATGAA AAATGGCTAACCCTAGTGAACCGCAAAAACAGCCTGGAACGAATTAATGAGGTAATCATTCGCAAACGAGAGACTCGTTT TGTTCCATCTACAAACGCTGGGTCTGTTCTTACGGATTATGTGTTGGATTTGTATCGGCACTGGTTTGAAGAATCTGCTA CTAGTGTGAAAGAAATGACTTTATGGAATGTGAACGAGGACGGGGCCGAAATTGTTGGGATCCCATCCTTATCCATAACT GCTGCCAAAGAGAAGTTAGCTGGGATCAGAAATCACAACTACCCTTGGCGGGATTTATCGATTTGGTCTGGGAATGGACC AAACCAAAACAAGGCATCGAATCAAGTTCCGCCACAATTTTCTCCCCATCAAAATGGTAGCAAAAACCTCTTCCAAAAAA TCCAAACCGATCTTAGATTCATCGAATCCAAACTGGAGGAATTTGATCACGCCAACAATTTGCAGAGTGAAGGGGAACTG AAATCACCCTCTTCGTTTCAAGATTCGGAAATTTGGCTTTGGATGCAGAGTGAATCGTATTTACGTCGGCTCATTCGCAA AACAGAGATTTATTTATTACGCCATAGGGACTTGGACACAATTCGGAAAAACCAAATCATGATCCAATCCATCCGAAAGG AAATCCGTTATTTAAAACGAAGCCTTTATCCAATGATTGATTCATTCCCAGAAAAAGGGTGA
Upstream 100 bases:
>100_bases TGTTTAGGCTTTTTAAATGCATATCTGTTTTGCCGTTTGATTCCTTTGTTTCCCAGTTGACAGTCCTTGAGAGACATAAG AAAAAACCTTAGATAGTATT
Downstream 100 bases:
>100_bases AACACAGAATTGTCTTCAAACTCAGGAAAATAATCAAAAAATAATTTTTGAGACACCACTCTATAAGCAAAGGGATTTTT TTCCACATAACCATCTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: PseD Protein
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MSQMIDPISSEIFERKPYLRNYFKNFLSKNRWELAPAKKNGEYYVSLDGNPLSSSFSPLTQAKRLVDSYSLRPTDVVILL GLGNPHLIPLISEALAPGQILILIGEDESLTPVLWDLFLKPILQVPGRHLFSGEMFYPLFFNYLESLPIERVSGLKVIRN PTDTNRNPIYKELEEKTQNVFSAKMSDLLTKFEFERLWIKNSIFNLVKAETLPPVKFPISMLRDKFQGLNAVLVSAGPSL RKNLPWLQEVRDKLFVFSCDTSLKVLLKAGIQPDGVVTLDAQTNSFFHFMGESLTLIPLFADLVSSPTLLREPMFQTVVH SVTAKYQVDAEGSLVREVTAGGELAEQVFQDVGDIQSGGSVATTAFDMLRYMGFGTVYFLGQDLAYSGREIHSTGTHHNE KWLTLVNRKNSLERINEVIIRKRETRFVPSTNAGSVLTDYVLDLYRHWFEESATSVKEMTLWNVNEDGAEIVGIPSLSIT AAKEKLAGIRNHNYPWRDLSIWSGNGPNQNKASNQVPPQFSPHQNGSKNLFQKIQTDLRFIESKLEEFDHANNLQSEGEL KSPSSFQDSEIWLWMQSESYLRRLIRKTEIYLLRHRDLDTIRKNQIMIQSIRKEIRYLKRSLYPMIDSFPEKG
Sequences:
>Translated_633_residues MSQMIDPISSEIFERKPYLRNYFKNFLSKNRWELAPAKKNGEYYVSLDGNPLSSSFSPLTQAKRLVDSYSLRPTDVVILL GLGNPHLIPLISEALAPGQILILIGEDESLTPVLWDLFLKPILQVPGRHLFSGEMFYPLFFNYLESLPIERVSGLKVIRN PTDTNRNPIYKELEEKTQNVFSAKMSDLLTKFEFERLWIKNSIFNLVKAETLPPVKFPISMLRDKFQGLNAVLVSAGPSL RKNLPWLQEVRDKLFVFSCDTSLKVLLKAGIQPDGVVTLDAQTNSFFHFMGESLTLIPLFADLVSSPTLLREPMFQTVVH SVTAKYQVDAEGSLVREVTAGGELAEQVFQDVGDIQSGGSVATTAFDMLRYMGFGTVYFLGQDLAYSGREIHSTGTHHNE KWLTLVNRKNSLERINEVIIRKRETRFVPSTNAGSVLTDYVLDLYRHWFEESATSVKEMTLWNVNEDGAEIVGIPSLSIT AAKEKLAGIRNHNYPWRDLSIWSGNGPNQNKASNQVPPQFSPHQNGSKNLFQKIQTDLRFIESKLEEFDHANNLQSEGEL KSPSSFQDSEIWLWMQSESYLRRLIRKTEIYLLRHRDLDTIRKNQIMIQSIRKEIRYLKRSLYPMIDSFPEKG >Mature_632_residues SQMIDPISSEIFERKPYLRNYFKNFLSKNRWELAPAKKNGEYYVSLDGNPLSSSFSPLTQAKRLVDSYSLRPTDVVILLG LGNPHLIPLISEALAPGQILILIGEDESLTPVLWDLFLKPILQVPGRHLFSGEMFYPLFFNYLESLPIERVSGLKVIRNP TDTNRNPIYKELEEKTQNVFSAKMSDLLTKFEFERLWIKNSIFNLVKAETLPPVKFPISMLRDKFQGLNAVLVSAGPSLR KNLPWLQEVRDKLFVFSCDTSLKVLLKAGIQPDGVVTLDAQTNSFFHFMGESLTLIPLFADLVSSPTLLREPMFQTVVHS VTAKYQVDAEGSLVREVTAGGELAEQVFQDVGDIQSGGSVATTAFDMLRYMGFGTVYFLGQDLAYSGREIHSTGTHHNEK WLTLVNRKNSLERINEVIIRKRETRFVPSTNAGSVLTDYVLDLYRHWFEESATSVKEMTLWNVNEDGAEIVGIPSLSITA AKEKLAGIRNHNYPWRDLSIWSGNGPNQNKASNQVPPQFSPHQNGSKNLFQKIQTDLRFIESKLEEFDHANNLQSEGELK SPSSFQDSEIWLWMQSESYLRRLIRKTEIYLLRHRDLDTIRKNQIMIQSIRKEIRYLKRSLYPMIDSFPEKG
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72314; Mature: 72183
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMIDPISSEIFERKPYLRNYFKNFLSKNRWELAPAKKNGEYYVSLDGNPLSSSFSPLT CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHH QAKRLVDSYSLRPTDVVILLGLGNPHLIPLISEALAPGQILILIGEDESLTPVLWDLFLK HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH PILQVPGRHLFSGEMFYPLFFNYLESLPIERVSGLKVIRNPTDTNRNPIYKELEEKTQNV HHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHH FSAKMSDLLTKFEFERLWIKNSIFNLVKAETLPPVKFPISMLRDKFQGLNAVLVSAGPSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCHH RKNLPWLQEVRDKLFVFSCDTSLKVLLKAGIQPDGVVTLDAQTNSFFHFMGESLTLIPLF HHCCCHHHHHHHCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHH ADLVSSPTLLREPMFQTVVHSVTAKYQVDAEGSLVREVTAGGELAEQVFQDVGDIQSGGS HHHHCCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCC VATTAFDMLRYMGFGTVYFLGQDLAYSGREIHSTGTHHNEKWLTLVNRKNSLERINEVII HHHHHHHHHHHHCCCEEEEECCHHHCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHHHH RKRETRFVPSTNAGSVLTDYVLDLYRHWFEESATSVKEMTLWNVNEDGAEIVGIPSLSIT HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCHH AAKEKLAGIRNHNYPWRDLSIWSGNGPNQNKASNQVPPQFSPHQNGSKNLFQKIQTDLRF HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IESKLEEFDHANNLQSEGELKSPSSFQDSEIWLWMQSESYLRRLIRKTEIYLLRHRDLDT HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEEEECCCHHH IRKNQIMIQSIRKEIRYLKRSLYPMIDSFPEKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQMIDPISSEIFERKPYLRNYFKNFLSKNRWELAPAKKNGEYYVSLDGNPLSSSFSPLT CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCCHHHH QAKRLVDSYSLRPTDVVILLGLGNPHLIPLISEALAPGQILILIGEDESLTPVLWDLFLK HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH PILQVPGRHLFSGEMFYPLFFNYLESLPIERVSGLKVIRNPTDTNRNPIYKELEEKTQNV HHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHH FSAKMSDLLTKFEFERLWIKNSIFNLVKAETLPPVKFPISMLRDKFQGLNAVLVSAGPSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCHH RKNLPWLQEVRDKLFVFSCDTSLKVLLKAGIQPDGVVTLDAQTNSFFHFMGESLTLIPLF HHCCCHHHHHHHCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCHHHHHHH ADLVSSPTLLREPMFQTVVHSVTAKYQVDAEGSLVREVTAGGELAEQVFQDVGDIQSGGS HHHHCCCHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCC VATTAFDMLRYMGFGTVYFLGQDLAYSGREIHSTGTHHNEKWLTLVNRKNSLERINEVII HHHHHHHHHHHHCCCEEEEECCHHHCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHHHH RKRETRFVPSTNAGSVLTDYVLDLYRHWFEESATSVKEMTLWNVNEDGAEIVGIPSLSIT HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCHH AAKEKLAGIRNHNYPWRDLSIWSGNGPNQNKASNQVPPQFSPHQNGSKNLFQKIQTDLRF HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IESKLEEFDHANNLQSEGELKSPSSFQDSEIWLWMQSESYLRRLIRKTEIYLLRHRDLDT HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEEEECCCHHH IRKNQIMIQSIRKEIRYLKRSLYPMIDSFPEKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA