| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is nadE2 [H]
Identifier: 183220721
GI number: 183220721
Start: 1385088
End: 1387028
Strand: Reverse
Name: nadE2 [H]
Synonym: LEPBI_I1331
Alternate gene names: 183220721
Gene position: 1387028-1385088 (Counterclockwise)
Preceding gene: 183220722
Following gene: 183220719
Centisome position: 38.53
GC content: 41.99
Gene sequence:
>1941_bases ATGACAAAATATAAAATTGCCGCCGTTTCTTTAAATACCACTCCTCTTGATTTTTTAGGCAATTTTGAAACCATTCAATC TGCGATCCTTTCCAAGGAAACAAGGGATGCCGATCTCATCCTTTTTCCCGAACTTTGTATTTCTGGTTATGGATGTGAGG ATGCATTTTTCAGGCCAAGTCTCTGGGAAAAAGGAAAAGAAGTTTTGGACAAAATCAAAACCATTTCCCCAAACCAAGTT GTGATTGTGGGTCTTCCCATCTTTATTGATTCCTTTCTCTACAATTGTATGGCTGTCCTTTTGCATGGAAAGATCCAAGC CATTGTTCCTAAACTCAATTTGGCAAATACGGGCGTACACTATGAACGAAGATGGTTCCATTCTCCCAAAACGTTTCTCA ACCAATCCGTAACCATTGGTGGAATGGAAATACCATTTGGTCATTTTCTTTTTTCATGGAAGGATTTACATTTTGCCATT GAGATCTGTGAGGACAGTTGGTCCTCTTTCAAACCTTCTCAAGTTTACAATCTTGCGGGTGCCGATGTTTTACTCTCTCC AGGTGCCTCTCATTTTGCGATGGGCAAACAAAACATCCGAAGGCAAATCTTTACGGAAACCAGTCGGAGCCAAAACAATT TACAAGTATTCACAAACCTTTGTGGGAATGAATCAGGAAGGATCATCTTTGAAGGTGGTGCCTTCTTTGCTTCCTGTGGC AGACTCGTAAAGGAAGGGCCAAGGTTACATTTCACTCCCTTTGCCATCACTTCCCACTCCTTCCATCTCGATGAAATCCG ATCTGCAAAAGCTCGTCATTTCCGAGAACCACTCCCTGAGCCAAAAACAACCCTCATTCCCAAAATCAATCTTTCGCCAC TTAATCCTGAAGAGGCGAAAACCAGTCCATTTTTGGTTTTAGACAAACGGGATGAATCCATCTCCCCAAACGCAGATCCT ACGGAAAACTTAAGTCCCTTTGAAGAATTCACAAAAGCCGTAAGCCTTGGTCTCTTTGATTACTTGAGAAAGTCCAAAAC CAAAGGGTATACACTTTCACTCTCTGGGGGAGCAGACAGTGCTACCTGTGCCATCCTTGTCTCCACATTCGTGACAATCG CCAAAAAAGAAAACGGGGACGATCATCTCACCAAACTAGGTTGGAATGAAAAAAACCTTCTTGTCACACTGTACCAAAAA ACATCCAACAATTCTCCCATCACGGAAGAAATTGCAAAAACCTTAAGTGAAGAATTGGATTGTGAATTCCATTCCATCTC CATTGATGAAATGGTTTCGTCTTCGGTTTCCCTCATTGAATCGGTGAAGGGAACTAAACTCAATTGGAAAGAACACGACC TTGCCTTACAAAACATCCAAGCCCGGGTTCGCTCTCCCCTCATTTGGTTACTTGCCAATCTGAATGGTCACCTTTTATTA TCCACAGGGAATCGTAGTGAGGCCGCTGTGGGATACACCACAATGGATGGAGATTCCTCAGGTTCCATTGCGCCACTCGC TGGTGTGAGTAAAGAATTTTTATTAGAATGGTTAGATGACATCCAAAAGGGAAACAATCGTTATATTTCACCCAAACAAT CCATTCAAATGTTACGGAATACAAAACCAACCGCAGAACTAAAACCCCTCACCGAACACCAGGAAGATGAGAAGGATCTA ATGCCTTATCCCATTCTCAATTCCATTGAACGGAAACTTGTCTACCTAACAATGAATGAGTCGGAAGTATTAGAAGAACT CAAAAAAGAATACCCTTGGGAGTCCAAGGAACAACTGTTTGGTTATTTGCAAAAATTTAAAACACTATTTAGAATCTCAC AATGGAAACGAGAGAGGCTTCCTCCCTCGTTCCATTTGGACGAATACGGACTCGATCCAAAATCGAGTTACCGTTTTCCC ATCCTTTCCAACGAAACCTAA
Upstream 100 bases:
>100_bases AAAAACAAAGAACTACGGGAAAAGATGGGAAATACGAATCGAAACTTTGTTGTAGAAAATAGAGGTGCATCGGAAAAGAT TTATAACCGAGTTTTTCCGT
Downstream 100 bases:
>100_bases GGAGGTGGTTGGAGTCCTGCCTTTGTAAAGGCATTGGCAGCTTCCTTTTCGATTTGTTCGTTTTGGAATTGGATGTTCTT TAAGATTTCCTGGAATTTTT
Product: putative glutamine-dependent NAD(+) synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MTKYKIAAVSLNTTPLDFLGNFETIQSAILSKETRDADLILFPELCISGYGCEDAFFRPSLWEKGKEVLDKIKTISPNQV VIVGLPIFIDSFLYNCMAVLLHGKIQAIVPKLNLANTGVHYERRWFHSPKTFLNQSVTIGGMEIPFGHFLFSWKDLHFAI EICEDSWSSFKPSQVYNLAGADVLLSPGASHFAMGKQNIRRQIFTETSRSQNNLQVFTNLCGNESGRIIFEGGAFFASCG RLVKEGPRLHFTPFAITSHSFHLDEIRSAKARHFREPLPEPKTTLIPKINLSPLNPEEAKTSPFLVLDKRDESISPNADP TENLSPFEEFTKAVSLGLFDYLRKSKTKGYTLSLSGGADSATCAILVSTFVTIAKKENGDDHLTKLGWNEKNLLVTLYQK TSNNSPITEEIAKTLSEELDCEFHSISIDEMVSSSVSLIESVKGTKLNWKEHDLALQNIQARVRSPLIWLLANLNGHLLL STGNRSEAAVGYTTMDGDSSGSIAPLAGVSKEFLLEWLDDIQKGNNRYISPKQSIQMLRNTKPTAELKPLTEHQEDEKDL MPYPILNSIERKLVYLTMNESEVLEELKKEYPWESKEQLFGYLQKFKTLFRISQWKRERLPPSFHLDEYGLDPKSSYRFP ILSNET
Sequences:
>Translated_646_residues MTKYKIAAVSLNTTPLDFLGNFETIQSAILSKETRDADLILFPELCISGYGCEDAFFRPSLWEKGKEVLDKIKTISPNQV VIVGLPIFIDSFLYNCMAVLLHGKIQAIVPKLNLANTGVHYERRWFHSPKTFLNQSVTIGGMEIPFGHFLFSWKDLHFAI EICEDSWSSFKPSQVYNLAGADVLLSPGASHFAMGKQNIRRQIFTETSRSQNNLQVFTNLCGNESGRIIFEGGAFFASCG RLVKEGPRLHFTPFAITSHSFHLDEIRSAKARHFREPLPEPKTTLIPKINLSPLNPEEAKTSPFLVLDKRDESISPNADP TENLSPFEEFTKAVSLGLFDYLRKSKTKGYTLSLSGGADSATCAILVSTFVTIAKKENGDDHLTKLGWNEKNLLVTLYQK TSNNSPITEEIAKTLSEELDCEFHSISIDEMVSSSVSLIESVKGTKLNWKEHDLALQNIQARVRSPLIWLLANLNGHLLL STGNRSEAAVGYTTMDGDSSGSIAPLAGVSKEFLLEWLDDIQKGNNRYISPKQSIQMLRNTKPTAELKPLTEHQEDEKDL MPYPILNSIERKLVYLTMNESEVLEELKKEYPWESKEQLFGYLQKFKTLFRISQWKRERLPPSFHLDEYGLDPKSSYRFP ILSNET >Mature_645_residues TKYKIAAVSLNTTPLDFLGNFETIQSAILSKETRDADLILFPELCISGYGCEDAFFRPSLWEKGKEVLDKIKTISPNQVV IVGLPIFIDSFLYNCMAVLLHGKIQAIVPKLNLANTGVHYERRWFHSPKTFLNQSVTIGGMEIPFGHFLFSWKDLHFAIE ICEDSWSSFKPSQVYNLAGADVLLSPGASHFAMGKQNIRRQIFTETSRSQNNLQVFTNLCGNESGRIIFEGGAFFASCGR LVKEGPRLHFTPFAITSHSFHLDEIRSAKARHFREPLPEPKTTLIPKINLSPLNPEEAKTSPFLVLDKRDESISPNADPT ENLSPFEEFTKAVSLGLFDYLRKSKTKGYTLSLSGGADSATCAILVSTFVTIAKKENGDDHLTKLGWNEKNLLVTLYQKT SNNSPITEEIAKTLSEELDCEFHSISIDEMVSSSVSLIESVKGTKLNWKEHDLALQNIQARVRSPLIWLLANLNGHLLLS TGNRSEAAVGYTTMDGDSSGSIAPLAGVSKEFLLEWLDDIQKGNNRYISPKQSIQMLRNTKPTAELKPLTEHQEDEKDLM PYPILNSIERKLVYLTMNESEVLEELKKEYPWESKEQLFGYLQKFKTLFRISQWKRERLPPSFHLDEYGLDPKSSYRFPI LSNET
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=687, Percent_Identity=26.0553129548763, Blast_Score=220, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17538756, Length=688, Percent_Identity=27.906976744186, Blast_Score=214, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321865, Length=687, Percent_Identity=28.0931586608443, Blast_Score=211, Evalue=4e-55, Organism=Drosophila melanogaster, GI24641841, Length=679, Percent_Identity=27.0986745213549, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI24641843, Length=679, Percent_Identity=27.0986745213549, Blast_Score=205, Evalue=7e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR000132 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 72909; Mature: 72778
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYKIAAVSLNTTPLDFLGNFETIQSAILSKETRDADLILFPELCISGYGCEDAFFRPS CCCEEEEEEEECCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCH LWEKGKEVLDKIKTISPNQVVIVGLPIFIDSFLYNCMAVLLHGKIQAIVPKLNLANTGVH HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC YERRWFHSPKTFLNQSVTIGGMEIPFGHFLFSWKDLHFAIEICEDSWSSFKPSQVYNLAG HHHHHCCCCHHHHCCCEEECCEECCHHHHHHHHHHHEEEEEEHHCCCCCCCCCHHHCCCC ADVLLSPGASHFAMGKQNIRRQIFTETSRSQNNLQVFTNLCGNESGRIIFEGGAFFASCG CCEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHH RLVKEGPRLHFTPFAITSHSFHLDEIRSAKARHFREPLPEPKTTLIPKINLSPLNPEEAK HHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHCC TSPFLVLDKRDESISPNADPTENLSPFEEFTKAVSLGLFDYLRKSKTKGYTLSLSGGADS CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC ATCAILVSTFVTIAKKENGDDHLTKLGWNEKNLLVTLYQKTSNNSPITEEIAKTLSEELD HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC CEFHSISIDEMVSSSVSLIESVKGTKLNWKEHDLALQNIQARVRSPLIWLLANLNGHLLL CCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE STGNRSEAAVGYTTMDGDSSGSIAPLAGVSKEFLLEWLDDIQKGNNRYISPKQSIQMLRN EECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC TKPTAELKPLTEHQEDEKDLMPYPILNSIERKLVYLTMNESEVLEELKKEYPWESKEQLF CCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCEEEEEEECHHHHHHHHHHHCCCCCHHHHH GYLQKFKTLFRISQWKRERLPPSFHLDEYGLDPKSSYRFPILSNET HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKYKIAAVSLNTTPLDFLGNFETIQSAILSKETRDADLILFPELCISGYGCEDAFFRPS CCEEEEEEEECCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCH LWEKGKEVLDKIKTISPNQVVIVGLPIFIDSFLYNCMAVLLHGKIQAIVPKLNLANTGVH HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC YERRWFHSPKTFLNQSVTIGGMEIPFGHFLFSWKDLHFAIEICEDSWSSFKPSQVYNLAG HHHHHCCCCHHHHCCCEEECCEECCHHHHHHHHHHHEEEEEEHHCCCCCCCCCHHHCCCC ADVLLSPGASHFAMGKQNIRRQIFTETSRSQNNLQVFTNLCGNESGRIIFEGGAFFASCG CCEEECCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHHHH RLVKEGPRLHFTPFAITSHSFHLDEIRSAKARHFREPLPEPKTTLIPKINLSPLNPEEAK HHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHCC TSPFLVLDKRDESISPNADPTENLSPFEEFTKAVSLGLFDYLRKSKTKGYTLSLSGGADS CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC ATCAILVSTFVTIAKKENGDDHLTKLGWNEKNLLVTLYQKTSNNSPITEEIAKTLSEELD HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC CEFHSISIDEMVSSSVSLIESVKGTKLNWKEHDLALQNIQARVRSPLIWLLANLNGHLLL CCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE STGNRSEAAVGYTTMDGDSSGSIAPLAGVSKEFLLEWLDDIQKGNNRYISPKQSIQMLRN EECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC TKPTAELKPLTEHQEDEKDLMPYPILNSIERKLVYLTMNESEVLEELKKEYPWESKEQLF CCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCEEEEEEECHHHHHHHHHHHCCCCCHHHHH GYLQKFKTLFRISQWKRERLPPSFHLDEYGLDPKSSYRFPILSNET HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]