| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220679
Identifier: 183220679
GI number: 183220679
Start: 1346263
End: 1346679
Strand: Direct
Name: 183220679
Synonym: LEPBI_I1289
Alternate gene names: NA
Gene position: 1346263-1346679 (Clockwise)
Preceding gene: 183220678
Following gene: 183220680
Centisome position: 37.4
GC content: 42.45
Gene sequence:
>417_bases TTGAATTTATCACAGATCAAAAATGAGAAAAATGCCATTCTATGTGTTGATGACGAACCCATCTTACTTCTTTCTCTCGT ACAAGAACTAAAACGAGAAATTGGAGGCAGTTACACTTATGAAACTGCCCAAAACCCAGAAGAAGCAATGGAAGTGATCG ATGATCTCTGCCAATCAGGAGTGGAAGTCATCCTGATTTTGTCCGATTGGCTCATGCCAGGCATGCGTGGGGATGAATTT CTCATCAAAGTCCACCAAAAATACCCTCATATCAAGTCCATTTTGATTTCGGGTCATGCCGATCGGGACGCCATCAACCG CGTCAAAGAAGAAGCCAAAACCTACGCCATTTTTTCCAAACCTTGGAACACCAAGGAACTTTTGGATGCAGTTCGTTTCT GTTGCAATTTGACCTAA
Upstream 100 bases:
>100_bases AATCGTGGAAAAAATGAATGGAAAAATTGATTTTATTTCGGATCCTTCTGGAACTGAATTTCGTGTCTACATACCAAGAG TCTAAAGAAGGGGAAAACGT
Downstream 100 bases:
>100_bases GTCCATTTTTTTGGACTTAAGGTGCGTACCATCTACATCCGCAAACTCCGATTCGAAGAAGCTCGGATCAAACTCGAAAG GGAACTCCATGATGCCTTTA
Product: putative two-component response regulator
Products: NA
Alternate protein names: Two-Component Response Regulator; Thioredoxin Reductase; Response Regulator Receiver Protein; Pyridine Nucleotide-Disulphide Oxidoreductase; Two-Component Response Regulator Receiver Protein; Signal Transduction Histidine Kinase; Response Regulator/ Thioredoxin-Disulfide Reductase; Two-Component Hybrid Sensor And Regulator; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; CheY-Like Receiver Protein; Response Regulator/Sensor Histidine Kinase HsfB; Sensor Protein; PAS Fold Family; Receiver Protein Of A Two-Component Response Regulator; Two-Component System Thioredoxin Reductase; Signal Transduction Protein; Two Component Complex Response Regulator; EAL Family Signaling Protein; Two-Component System Response Regulator; Chemotaxis Protein CheY; Multi-Sensor Histidine Kinase; Signal Transduction Family Protein; PAS/PAC Sensor Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNLSQIKNEKNAILCVDDEPILLLSLVQELKREIGGSYTYETAQNPEEAMEVIDDLCQSGVEVILILSDWLMPGMRGDEF LIKVHQKYPHIKSILISGHADRDAINRVKEEAKTYAIFSKPWNTKELLDAVRFCCNLT
Sequences:
>Translated_138_residues MNLSQIKNEKNAILCVDDEPILLLSLVQELKREIGGSYTYETAQNPEEAMEVIDDLCQSGVEVILILSDWLMPGMRGDEF LIKVHQKYPHIKSILISGHADRDAINRVKEEAKTYAIFSKPWNTKELLDAVRFCCNLT >Mature_138_residues MNLSQIKNEKNAILCVDDEPILLLSLVQELKREIGGSYTYETAQNPEEAMEVIDDLCQSGVEVILILSDWLMPGMRGDEF LIKVHQKYPHIKSILISGHADRDAINRVKEEAKTYAIFSKPWNTKELLDAVRFCCNLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15723; Mature: 15723
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSQIKNEKNAILCVDDEPILLLSLVQELKREIGGSYTYETAQNPEEAMEVIDDLCQSG CCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC VEVILILSDWLMPGMRGDEFLIKVHQKYPHIKSILISGHADRDAINRVKEEAKTYAIFSK HHEEEHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PWNTKELLDAVRFCCNLT CCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNLSQIKNEKNAILCVDDEPILLLSLVQELKREIGGSYTYETAQNPEEAMEVIDDLCQSG CCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC VEVILILSDWLMPGMRGDEFLIKVHQKYPHIKSILISGHADRDAINRVKEEAKTYAIFSK HHEEEHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PWNTKELLDAVRFCCNLT CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA