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The map label for this gene is mcp4 [H]

Identifier: 183220650

GI number: 183220650

Start: 1302543

End: 1304150

Strand: Direct

Name: mcp4 [H]

Synonym: LEPBI_I1258

Alternate gene names: 183220650

Gene position: 1302543-1304150 (Clockwise)

Preceding gene: 183220649

Following gene: 183220651

Centisome position: 36.18

GC content: 38.81

Gene sequence:

>1608_bases
TTGATTTTTTGCCAAAGGAATGTTTTCAGTAATTCCTTGCAATCTTTCCGAATGCAAAAGACGATAAAGAAAGATATGGA
CGAGTATACATTAAAATCCGCAAAAACCATCAATACGATTCGTTTTATTTTATTTGGCATTTACGTTTTAGGGATTTTGG
GAAGTTTGGGTTCCATTCGCCCAGACCAATTGATCGTGATGGTGATGTCAACTTCCTTGTATGGAGTCCTTGCGTTTACC
CAATTGTATCTCTTCCGAAAACATAAAAATCCTTATCCCTTTTTGTTTGTGGTAGGTGATGTGATCCTTGTTGGTTTATC
CACTTGGGGGCAATCTATGATCACATTGGATTTATCCGCTGCTGCTTTAAAACTTGGAATCAATTATACGATTTGTTTTT
TTGTGATTCTATACTCTGGTTTTTTATTTTCTGCAGGACAAACTATCATTATAGGAACTCTTCTCATCATCATTCACATT
GGCTCCTTATTTTTTTCCTATTTGGAAGGAGTGAGTTTTGTCGACCGCAATGATGTACACCATTTGGCCCATTCGGTTTC
GTTACCGATTGAAATTGTAAAAGTGGTGTTTTTGATTCTCTCCACATACTTTATGAGTCAGATGGTACGACTACTCAACG
CAATTAGGGAAGAGGCAATGGAAGGGAAAAAAACAGCGGATTCCCATGCCAAAATAGTATCAGAACAAAAAGAAGCAATG
GTCGATACGGGAGAAAACTTAAATCAATCTGTTGCCGCCTTAAAGGTGTTTACCGATGATTTGAATGGGCTTGTCCAAAA
CCAAGCGGCATCCATTGAAGAGATTTCAGCATCTCTCACAGAAATTGCTCAATCCACAGAAAATTCCTTTCATTTTGTAA
AGGACCAATATTCTCGCATCGAATCCCTCAATGAAGAAAGCCAAACCTTAGAAGGCATCGTTGCTTCCGTTAGAAACGAA
ATTGAACTCATTTCCAATCAAATCAAAGAATCTTCCAAATTTAGTAATTTAGTCACAAGTTCCATGGAAAACTTAAACAA
TGTTCTCTCTGAGGTAAGTTCGAGTTTTCAGAAAGTAGAAGATGTAAACCAAATCATGAAAGAAATTGCTGATCAAACCA
ACTTACTTGCGTTAAATGCCTCAATTGAAGCGGCTAGGGCTGGGGAACATGGGCGTGGTTTTGCTGTTGTCGCACAAGAA
GTTGCCAAGTTAGCAGAAAGTTCAGCATCCAATGCGAGTATCATCTCTAAAACCATTCTAAAATCGAAATCGGATCTCAT
CAAAGGGAATCTTTCGGCAAAGGAAGCTACTTCGATGGCAAGTAACCAAGAAAAAGAAATGTTGAACATCCAATCCAAAG
TGATCAATTTCAACGAAAAAATCATCGATATGCAAAAGTTAAACGCCCGAGTTGTAGAATCTCAAAAACAATTGAAGGAG
ATTTCCTCCCAACTCGAAACTATCGCCAACGAACAGTCCATTGGAAACCAAGAAGTCATGCGTGCGGCTCAAAACATTGA
AGATGCTGTGCAAGTGGTGGCAGAAAATACTAGGATTCTTGCCGAACACATTGAGGACATCCAAGTGCTTGCCAATCGGA
TCAAATGA

Upstream 100 bases:

>100_bases
AGTTGGATCCAAGTCATACCATGTCCATCGTATGTATTTCTTTCCATAGAAAATGATGGTTCGGCATCTTACATTTGCAT
TCGTGCCGAGTTGAAGCGGA

Downstream 100 bases:

>100_bases
TCCTTGTTTAACACTATTAACTTAACGGATTTGACGTTTGTTCAGAAATCAACAAGGGAAAATTATTTGTAATTCTTTTC
CCTATATTGAATGGTGAGTG

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MIFCQRNVFSNSLQSFRMQKTIKKDMDEYTLKSAKTINTIRFILFGIYVLGILGSLGSIRPDQLIVMVMSTSLYGVLAFT
QLYLFRKHKNPYPFLFVVGDVILVGLSTWGQSMITLDLSAAALKLGINYTICFFVILYSGFLFSAGQTIIIGTLLIIIHI
GSLFFSYLEGVSFVDRNDVHHLAHSVSLPIEIVKVVFLILSTYFMSQMVRLLNAIREEAMEGKKTADSHAKIVSEQKEAM
VDTGENLNQSVAALKVFTDDLNGLVQNQAASIEEISASLTEIAQSTENSFHFVKDQYSRIESLNEESQTLEGIVASVRNE
IELISNQIKESSKFSNLVTSSMENLNNVLSEVSSSFQKVEDVNQIMKEIADQTNLLALNASIEAARAGEHGRGFAVVAQE
VAKLAESSASNASIISKTILKSKSDLIKGNLSAKEATSMASNQEKEMLNIQSKVINFNEKIIDMQKLNARVVESQKQLKE
ISSQLETIANEQSIGNQEVMRAAQNIEDAVQVVAENTRILAEHIEDIQVLANRIK

Sequences:

>Translated_535_residues
MIFCQRNVFSNSLQSFRMQKTIKKDMDEYTLKSAKTINTIRFILFGIYVLGILGSLGSIRPDQLIVMVMSTSLYGVLAFT
QLYLFRKHKNPYPFLFVVGDVILVGLSTWGQSMITLDLSAAALKLGINYTICFFVILYSGFLFSAGQTIIIGTLLIIIHI
GSLFFSYLEGVSFVDRNDVHHLAHSVSLPIEIVKVVFLILSTYFMSQMVRLLNAIREEAMEGKKTADSHAKIVSEQKEAM
VDTGENLNQSVAALKVFTDDLNGLVQNQAASIEEISASLTEIAQSTENSFHFVKDQYSRIESLNEESQTLEGIVASVRNE
IELISNQIKESSKFSNLVTSSMENLNNVLSEVSSSFQKVEDVNQIMKEIADQTNLLALNASIEAARAGEHGRGFAVVAQE
VAKLAESSASNASIISKTILKSKSDLIKGNLSAKEATSMASNQEKEMLNIQSKVINFNEKIIDMQKLNARVVESQKQLKE
ISSQLETIANEQSIGNQEVMRAAQNIEDAVQVVAENTRILAEHIEDIQVLANRIK
>Mature_535_residues
MIFCQRNVFSNSLQSFRMQKTIKKDMDEYTLKSAKTINTIRFILFGIYVLGILGSLGSIRPDQLIVMVMSTSLYGVLAFT
QLYLFRKHKNPYPFLFVVGDVILVGLSTWGQSMITLDLSAAALKLGINYTICFFVILYSGFLFSAGQTIIIGTLLIIIHI
GSLFFSYLEGVSFVDRNDVHHLAHSVSLPIEIVKVVFLILSTYFMSQMVRLLNAIREEAMEGKKTADSHAKIVSEQKEAM
VDTGENLNQSVAALKVFTDDLNGLVQNQAASIEEISASLTEIAQSTENSFHFVKDQYSRIESLNEESQTLEGIVASVRNE
IELISNQIKESSKFSNLVTSSMENLNNVLSEVSSSFQKVEDVNQIMKEIADQTNLLALNASIEAARAGEHGRGFAVVAQE
VAKLAESSASNASIISKTILKSKSDLIKGNLSAKEATSMASNQEKEMLNIQSKVINFNEKIIDMQKLNARVVESQKQLKE
ISSQLETIANEQSIGNQEVMRAAQNIEDAVQVVAENTRILAEHIEDIQVLANRIK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=296, Percent_Identity=28.0405405405405, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI2367378, Length=276, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787690, Length=168, Percent_Identity=33.9285714285714, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788195, Length=169, Percent_Identity=32.5443786982249, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789453, Length=255, Percent_Identity=28.2352941176471, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59308; Mature: 59308

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]