| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is arsR [C]
Identifier: 183220634
GI number: 183220634
Start: 1290819
End: 1291181
Strand: Reverse
Name: arsR [C]
Synonym: LEPBI_I1241
Alternate gene names: 183220634
Gene position: 1291181-1290819 (Counterclockwise)
Preceding gene: 183220636
Following gene: 183220633
Centisome position: 35.87
GC content: 41.87
Gene sequence:
>363_bases ATGGCTGTAAAAGTGAAATCCCCATCGGAGAAGAGAAAAGAAACAGCGATCGAAGCGTTGAACCTAGTCTTAGATTCCAA ATTTTTAACAGCACTTGCGGAACCGAGCCGAATTGAAGTACTCAAACAAGTGATCCGCCATGGTAAGGCAGATATCTCAG AACTATCCGAAGGATTGTCCTTAGATCGTTCGGTAATCTCAAGACATCTACTCACCTTACAAGAAGCGGGAATCCTAGTA CGCGACAAACAAGGCAAACATGTATATTACCAATTGGAACCAAACCAAGCGATTCAAAAATTTAAAGCGATCTTGAACCA TCTAGAAGAGATGGTTGCCATTTGTTGCCCTCCTTCGAATTAA
Upstream 100 bases:
>100_bases TATGCACCTTATTGCACATATTTTTCCTGGTTGTGAAATCGGTCAACTTCAAATGGAAAAAAGCTAGACTCGCAAAAAAT CCTACAAAATGATTGGGTAG
Downstream 100 bases:
>100_bases AAAGTTCAAAATAGAAATTTGAGCCTCGTTCCCAATCGGATTTCAATTTTAGGATCAATTTTTCGCTTTGGAACATATGT CTTTGTTTCTTTTCAAAATG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; ArsR Family Transcriptional Regulator; Transcriptional Regulator ArsR
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKADISELSEGLSLDRSVISRHLLTLQEAGILV RDKQGKHVYYQLEPNQAIQKFKAILNHLEEMVAICCPPSN
Sequences:
>Translated_120_residues MAVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKADISELSEGLSLDRSVISRHLLTLQEAGILV RDKQGKHVYYQLEPNQAIQKFKAILNHLEEMVAICCPPSN >Mature_119_residues AVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKADISELSEGLSLDRSVISRHLLTLQEAGILVR DKQGKHVYYQLEPNQAIQKFKAILNHLEEMVAICCPPSN
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13429; Mature: 13298
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKADISELSEGLS CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHC LDRSVISRHLLTLQEAGILVRDKQGKHVYYQLEPNQAIQKFKAILNHLEEMVAICCPPSN HHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVKVKSPSEKRKETAIEALNLVLDSKFLTALAEPSRIEVLKQVIRHGKADISELSEGLS EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHC LDRSVISRHLLTLQEAGILVRDKQGKHVYYQLEPNQAIQKFKAILNHLEEMVAICCPPSN HHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA