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The map label for this gene is ywjB [H]

Identifier: 183220633

GI number: 183220633

Start: 1289971

End: 1290525

Strand: Reverse

Name: ywjB [H]

Synonym: LEPBI_I1240

Alternate gene names: 183220633

Gene position: 1290525-1289971 (Counterclockwise)

Preceding gene: 183220634

Following gene: 183220628

Centisome position: 35.85

GC content: 34.41

Gene sequence:

>555_bases
ATGAGAGAGATCCATTATTACGTTGCGACTTCTATCAATGGCTTTATTGAAAGCCAAAAATCCCAAACCAATCTTTTTCT
TAATGAAGGAGACCATGTAAATGAATATTTCAAAGATTTGGAAGAATATTCTGATGTACTACTAGGTCGGAAAACATATG
AATATGGTTTTGAATTTGGTCTAATCGCGGGGAAAAAGGCCTATCCGTGGATGGATCATTATCTGATCAGTGATGATCCA
AATTTAAAATACTCTGAACAAGAAATTACCATTGTTAGACCATTCGAAGTCAAAAGTACGATTCAGAAACTCCGCAAGAT
GGAAACAAACAAAAATATTTATCTTTGCGGTGGTGGTAATCTGGCAGGACTACTTTGGCAATTGGATGAAATCGATCGTT
TATTTCTTAAGGTAAATCCTATCATTCTTTCGAATGGCATCCATTTATTTGAACAGATTGATACGGAAACGAAATTAGAA
TTTGTGAAACTTAAACAATTCGAATCTGGTGTGATTTTATTGGAATACCAAAGGAAGAGGCTCGATTTTACTTAA

Upstream 100 bases:

>100_bases
ATACAAGACAATGGCAATCTCTAACACCTAACCTTAAAATCCAAACCGAAGCTTAAACTTTCTAAGCGATTACATTTTAA
TATCTCAATAGGTGACACAT

Downstream 100 bases:

>100_bases
TGCAATCGATTTATATTTCTTTGTTTCATTAAGGATTGGCCATTCGCTTAGCATCTTAACGAAGATTCCCACAAATGCGA
AACGGGAATCATCTCGTTTG

Product: putative dihydrofolate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MREIHYYVATSINGFIESQKSQTNLFLNEGDHVNEYFKDLEEYSDVLLGRKTYEYGFEFGLIAGKKAYPWMDHYLISDDP
NLKYSEQEITIVRPFEVKSTIQKLRKMETNKNIYLCGGGNLAGLLWQLDEIDRLFLKVNPIILSNGIHLFEQIDTETKLE
FVKLKQFESGVILLEYQRKRLDFT

Sequences:

>Translated_184_residues
MREIHYYVATSINGFIESQKSQTNLFLNEGDHVNEYFKDLEEYSDVLLGRKTYEYGFEFGLIAGKKAYPWMDHYLISDDP
NLKYSEQEITIVRPFEVKSTIQKLRKMETNKNIYLCGGGNLAGLLWQLDEIDRLFLKVNPIILSNGIHLFEQIDTETKLE
FVKLKQFESGVILLEYQRKRLDFT
>Mature_184_residues
MREIHYYVATSINGFIESQKSQTNLFLNEGDHVNEYFKDLEEYSDVLLGRKTYEYGFEFGLIAGKKAYPWMDHYLISDDP
NLKYSEQEITIVRPFEVKSTIQKLRKMETNKNIYLCGGGNLAGLLWQLDEIDRLFLKVNPIILSNGIHLFEQIDTETKLE
FVKLKQFESGVILLEYQRKRLDFT

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 21651; Mature: 21651

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIHYYVATSINGFIESQKSQTNLFLNEGDHVNEYFKDLEEYSDVLLGRKTYEYGFEFG
CCEEEEEEEECHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHCCCEEE
LIAGKKAYPWMDHYLISDDPNLKYSEQEITIVRPFEVKSTIQKLRKMETNKNIYLCGGGN
EEECCCCCCCCCCEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCC
LAGLLWQLDEIDRLFLKVNPIILSNGIHLFEQIDTETKLEFVKLKQFESGVILLEYQRKR
HHHHHHHHHHHHEEHHEECCEEEECCCHHHHHCCCCHHHHHHEEECCCCCEEEEEEECCC
LDFT
CCCC
>Mature Secondary Structure
MREIHYYVATSINGFIESQKSQTNLFLNEGDHVNEYFKDLEEYSDVLLGRKTYEYGFEFG
CCEEEEEEEECHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHCCCEEE
LIAGKKAYPWMDHYLISDDPNLKYSEQEITIVRPFEVKSTIQKLRKMETNKNIYLCGGGN
EEECCCCCCCCCCEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCC
LAGLLWQLDEIDRLFLKVNPIILSNGIHLFEQIDTETKLEFVKLKQFESGVILLEYQRKR
HHHHHHHHHHHHEEHHEECCEEEECCCHHHHHCCCCHHHHHHEEECCCCCEEEEEEECCC
LDFT
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]