| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cysD [H]
Identifier: 183220579
GI number: 183220579
Start: 1231561
End: 1232469
Strand: Reverse
Name: cysD [H]
Synonym: LEPBI_I1183
Alternate gene names: 183220579
Gene position: 1232469-1231561 (Counterclockwise)
Preceding gene: 183220580
Following gene: 183220578
Centisome position: 34.24
GC content: 40.7
Gene sequence:
>909_bases ATGACAAACACACATCGACTTTCACATTTAGACCAATTAGAATCAGAAGCAATTTATATCTTACGGGAAGTAGCTGCCCA ATTCGAAAGACCCGCATTATTATTCTCAGGTGGTAAAGATTCGATTTGTTTGGTGCATTTAGCACTCAAAGCCTTTCGAC CAGGTAAATTTCCTTTCCCACTCGTTCATATTGATACTGGGCATAACTTTGATGAGGCGCTGAAATTCCGAGATGAACTG GCAGATACAATCGGTGAAAAATTAATTGTACGTTATGTGCAAGATTCAATCGACCAAGGGAAAGCCGTCGAAGAAAAAGG TAAATTTCCAAGTCGTAATGCCATCCAAGCTGTGACTCTCCTTGATACGATCGCCGAATTTAAATTTGATGCCTGTATTG GTGGGGCGCGTCGGGATGAAGAAAAAGCAAGAGCCAAAGAACGAATTTTTTCAGTCAGAGATGAGTTTGGATCATGGGAT CCAAAACTCCAACGTCCTGAACTTTGGAATATTTATAATGGAAAAATCCATGTCGGCGAAAACGTAAGAGTTTTTCCGAT CAGTAACTGGACAGAACTAGATGTTTGGGAATACATCCGAAAAGAAAATATTGGACTACCTTCCTTGTATTTTTCTCATA AGCGTGAAATTGTTTGGAGAGAAGATTTGGTCTTCCCTGTCTCAAAATTTATCAGCTTAGACAATACCGACAAGGTGGAA ACAAGGACTGTTCGGTTTCGTACTGTTGGCGATATGACTTGCACTGCAGCAGTGGAATCGGAAGCAAACTCTGTGGATGA CATCATTCGTGAGATCCAAATTTCCCGTACAACGGAAAGAGGTTCTCGATTGGATGACAAACGATCGGAAGCTGCAATGG AAGATAGAAAAAAAGGTGGGTATTTTTAA
Upstream 100 bases:
>100_bases CTTTCGTGCGGGAAGGTGGTGGTGGGAACAAGAATCTAAGAAAGAGTGTGGTTTGCATTGGGTAGATGGAAAACTCACAC CGAAAAAAGGATAACAGGCC
Downstream 100 bases:
>100_bases TGGATATTTTACGATTTATCACAGCAGGAAGTGTGGACGATGGGAAATCAACTCTCATCGGACGTTTGTTATACGATAGT AAGTCCATTTTCCAAGACCA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTNTHRLSHLDQLESEAIYILREVAAQFERPALLFSGGKDSICLVHLALKAFRPGKFPFPLVHIDTGHNFDEALKFRDEL ADTIGEKLIVRYVQDSIDQGKAVEEKGKFPSRNAIQAVTLLDTIAEFKFDACIGGARRDEEKARAKERIFSVRDEFGSWD PKLQRPELWNIYNGKIHVGENVRVFPISNWTELDVWEYIRKENIGLPSLYFSHKREIVWREDLVFPVSKFISLDNTDKVE TRTVRFRTVGDMTCTAAVESEANSVDDIIREIQISRTTERGSRLDDKRSEAAMEDRKKGGYF
Sequences:
>Translated_302_residues MTNTHRLSHLDQLESEAIYILREVAAQFERPALLFSGGKDSICLVHLALKAFRPGKFPFPLVHIDTGHNFDEALKFRDEL ADTIGEKLIVRYVQDSIDQGKAVEEKGKFPSRNAIQAVTLLDTIAEFKFDACIGGARRDEEKARAKERIFSVRDEFGSWD PKLQRPELWNIYNGKIHVGENVRVFPISNWTELDVWEYIRKENIGLPSLYFSHKREIVWREDLVFPVSKFISLDNTDKVE TRTVRFRTVGDMTCTAAVESEANSVDDIIREIQISRTTERGSRLDDKRSEAAMEDRKKGGYF >Mature_301_residues TNTHRLSHLDQLESEAIYILREVAAQFERPALLFSGGKDSICLVHLALKAFRPGKFPFPLVHIDTGHNFDEALKFRDELA DTIGEKLIVRYVQDSIDQGKAVEEKGKFPSRNAIQAVTLLDTIAEFKFDACIGGARRDEEKARAKERIFSVRDEFGSWDP KLQRPELWNIYNGKIHVGENVRVFPISNWTELDVWEYIRKENIGLPSLYFSHKREIVWREDLVFPVSKFISLDNTDKVET RTVRFRTVGDMTCTAAVESEANSVDDIIREIQISRTTERGSRLDDKRSEAAMEDRKKGGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=298, Percent_Identity=46.6442953020134, Blast_Score=279, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 34758; Mature: 34627
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTHRLSHLDQLESEAIYILREVAAQFERPALLFSGGKDSICLVHLALKAFRPGKFPFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE LVHIDTGHNFDEALKFRDELADTIGEKLIVRYVQDSIDQGKAVEEKGKFPSRNAIQAVTL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH LDTIAEFKFDACIGGARRDEEKARAKERIFSVRDEFGSWDPKLQRPELWNIYNGKIHVGE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEECC NVRVFPISNWTELDVWEYIRKENIGLPSLYFSHKREIVWREDLVFPVSKFISLDNTDKVE CEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCCE TRTVRFRTVGDMTCTAAVESEANSVDDIIREIQISRTTERGSRLDDKRSEAAMEDRKKGG EEEEEEEEECCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC YF CC >Mature Secondary Structure TNTHRLSHLDQLESEAIYILREVAAQFERPALLFSGGKDSICLVHLALKAFRPGKFPFP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE LVHIDTGHNFDEALKFRDELADTIGEKLIVRYVQDSIDQGKAVEEKGKFPSRNAIQAVTL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH LDTIAEFKFDACIGGARRDEEKARAKERIFSVRDEFGSWDPKLQRPELWNIYNGKIHVGE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEECC NVRVFPISNWTELDVWEYIRKENIGLPSLYFSHKREIVWREDLVFPVSKFISLDNTDKVE CEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCCE TRTVRFRTVGDMTCTAAVESEANSVDDIIREIQISRTTERGSRLDDKRSEAAMEDRKKGG EEEEEEEEECCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC YF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]