Click here to switch to the map view.

The map label for this gene is yidK [H]

Identifier: 183220508

GI number: 183220508

Start: 1155642

End: 1157075

Strand: Reverse

Name: yidK [H]

Synonym: LEPBI_I1109

Alternate gene names: 183220508

Gene position: 1157075-1155642 (Counterclockwise)

Preceding gene: 183220509

Following gene: 183220507

Centisome position: 32.14

GC content: 37.8

Gene sequence:

>1434_bases
ATGATTTGGGATTTGATTGTTTTAGTGTTTTATTTTTTAGTAGTCTTTTATTTTGGTTTTCACTTTGCTAAAAAAAACCA
AAAAGAAGAAGATTTTTATTTAGCCAAAAAAGAAATCCATTGGGTGTTTCTTTTATTATCTCTCGTTGCCACAGAAACTT
CTAGTTTAACTTTTTTAAGTATTCCCTCTTTATCCTATAAAGGTGACTTTCGATTTTTAGAAATTGCAATGGGTTACATC
ATTGGAAGGACTATCGTTGCCTTGTATTTACTCCCCTCTTATTTTTCAGGAAATACCATATCAGTTTATGAATATGTGGG
AAACCGTTTTGGAAAATCTCCTCAAAAAACATTATCTTTCGTTTTTACCATTTCTCGATTACTTGGTGACGGGATCCGTT
TGTATGTGAGTTCTTTACCGATTGCCTTCCTTTTGGAACGAATGGGTTTTTCAATCTCACCAGAACTATTGGGTATCATC
GCTCTTACTATTTTAAGCATTGTGACTATCATTTATTCAGTGTTTGGTGGATTTAGGGCGATTGTATTTACCGATGTACT
CCAATGGATCATTTATATTTTTGGTGGGGTATTTGCTCTAGTTTTGATTCTTTCCCAATTGGGTGGCACAACTCTAATGG
ATACGTTACAAAAATTGGATTCAATAGGAAAGTGGAAAGTATTTGTTTTTGATTACAACCAAACAGGAGATAATAGCTAT
TTTATCCTCTTTGCTATCCTTGGAGGTGCCTTTATCTCCATTGGTTCCCATGGAACGGATTTGATGCTTGTCCAAAGAGT
CATAGCTACAAAAAATTTACTCTCAGGCCAAAAGATTTTGATTGGAAGTGGTATCGTTGTTTTCTTTCAGTTTTTACTCT
TTTTGTGCATCGGATCATTGCTGTATGTGTTTTATGATGGAAAATCCATACCAGCAGATAAGGTATTTAGCCATTTTATC
ATCAGTGAAGTCCCCTCACCCTTTCTTGGCATCCTCGTAGCTGCCATCCTTGCAAGTGCCATGTCCACACTCAGTTCCAC
CATCAATTCCCTTTCCCTCACGTGGGCAAGGGATTGGGATATGGACAAATGGTTTAGCCCAAGGGTATTATCCTTGTTTT
TTGGTGTTTTATTGTTTTTTGCAAGCCTCATCCCCTACTTCCTTGTCGAGACTTGGGAAAAAGGGATTCTAGAAATGGGC
CTCACCATCTTTTCTTATACCTTAGGTCCCTCGGTTGCGGTTTTTTTCCTCGCCAAAGGAAAACGGGACCTCCCCATCTC
TGGTCGTGTTTTTTCCTTATTTTTTATCCTAAGCATCCTTATCACTCTTGCGATGGGAATTGGATGGAAACTATCCTTTA
CTCTCCTTGTCCCCATCGGGTTTGTAACCTTATACGGACTCGTGACCATTGCCCGATTGATAAAAAAAATTTGA

Upstream 100 bases:

>100_bases
ATGTACCAGTTGGAATCATCACTAGGTCCGATTTACTTCGCCTTCTTTTGAAATATCCCAATTTGAGTTTGATTGTTTAA
AGTGAATGAAAAGGTAATTT

Downstream 100 bases:

>100_bases
CAGAATGAGAGCTTTCCGATCGTCTAAAAAGTAACAATGAAATCATTCGCACACATTCAGCTTCTCCTCCTCCTCGAAAT
CTTATAATTCGAGGGAGAGA

Product: putative sodium:solute symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MIWDLIVLVFYFLVVFYFGFHFAKKNQKEEDFYLAKKEIHWVFLLLSLVATETSSLTFLSIPSLSYKGDFRFLEIAMGYI
IGRTIVALYLLPSYFSGNTISVYEYVGNRFGKSPQKTLSFVFTISRLLGDGIRLYVSSLPIAFLLERMGFSISPELLGII
ALTILSIVTIIYSVFGGFRAIVFTDVLQWIIYIFGGVFALVLILSQLGGTTLMDTLQKLDSIGKWKVFVFDYNQTGDNSY
FILFAILGGAFISIGSHGTDLMLVQRVIATKNLLSGQKILIGSGIVVFFQFLLFLCIGSLLYVFYDGKSIPADKVFSHFI
ISEVPSPFLGILVAAILASAMSTLSSTINSLSLTWARDWDMDKWFSPRVLSLFFGVLLFFASLIPYFLVETWEKGILEMG
LTIFSYTLGPSVAVFFLAKGKRDLPISGRVFSLFFILSILITLAMGIGWKLSFTLLVPIGFVTLYGLVTIARLIKKI

Sequences:

>Translated_477_residues
MIWDLIVLVFYFLVVFYFGFHFAKKNQKEEDFYLAKKEIHWVFLLLSLVATETSSLTFLSIPSLSYKGDFRFLEIAMGYI
IGRTIVALYLLPSYFSGNTISVYEYVGNRFGKSPQKTLSFVFTISRLLGDGIRLYVSSLPIAFLLERMGFSISPELLGII
ALTILSIVTIIYSVFGGFRAIVFTDVLQWIIYIFGGVFALVLILSQLGGTTLMDTLQKLDSIGKWKVFVFDYNQTGDNSY
FILFAILGGAFISIGSHGTDLMLVQRVIATKNLLSGQKILIGSGIVVFFQFLLFLCIGSLLYVFYDGKSIPADKVFSHFI
ISEVPSPFLGILVAAILASAMSTLSSTINSLSLTWARDWDMDKWFSPRVLSLFFGVLLFFASLIPYFLVETWEKGILEMG
LTIFSYTLGPSVAVFFLAKGKRDLPISGRVFSLFFILSILITLAMGIGWKLSFTLLVPIGFVTLYGLVTIARLIKKI
>Mature_477_residues
MIWDLIVLVFYFLVVFYFGFHFAKKNQKEEDFYLAKKEIHWVFLLLSLVATETSSLTFLSIPSLSYKGDFRFLEIAMGYI
IGRTIVALYLLPSYFSGNTISVYEYVGNRFGKSPQKTLSFVFTISRLLGDGIRLYVSSLPIAFLLERMGFSISPELLGII
ALTILSIVTIIYSVFGGFRAIVFTDVLQWIIYIFGGVFALVLILSQLGGTTLMDTLQKLDSIGKWKVFVFDYNQTGDNSY
FILFAILGGAFISIGSHGTDLMLVQRVIATKNLLSGQKILIGSGIVVFFQFLLFLCIGSLLYVFYDGKSIPADKVFSHFI
ISEVPSPFLGILVAAILASAMSTLSSTINSLSLTWARDWDMDKWFSPRVLSLFFGVLLFFASLIPYFLVETWEKGILEMG
LTIFSYTLGPSVAVFFLAKGKRDLPISGRVFSLFFILSILITLAMGIGWKLSFTLLVPIGFVTLYGLVTIARLIKKI

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI4507035, Length=438, Percent_Identity=23.2876712328767, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI157671931, Length=447, Percent_Identity=23.9373601789709, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI167466278, Length=439, Percent_Identity=25.5125284738041, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI256985183, Length=412, Percent_Identity=23.5436893203883, Blast_Score=83, Evalue=6e-16,
Organism=Escherichia coli, GI1790113, Length=331, Percent_Identity=22.6586102719033, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28573698, Length=477, Percent_Identity=24.9475890985325, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24651739, Length=354, Percent_Identity=26.271186440678, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24641117, Length=470, Percent_Identity=23.6170212765957, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24651741, Length=346, Percent_Identity=23.9884393063584, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24645928, Length=376, Percent_Identity=26.063829787234, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281362918, Length=294, Percent_Identity=23.8095238095238, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221459584, Length=372, Percent_Identity=26.3440860215054, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI221459588, Length=491, Percent_Identity=24.2362525458248, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281362054, Length=423, Percent_Identity=22.4586288416076, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281362052, Length=423, Percent_Identity=22.4586288416076, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281362050, Length=423, Percent_Identity=22.4586288416076, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24648056, Length=423, Percent_Identity=22.4586288416076, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356827, Length=423, Percent_Identity=22.4586288416076, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28574994, Length=452, Percent_Identity=25.8849557522124, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24640370, Length=327, Percent_Identity=27.82874617737, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221459586, Length=448, Percent_Identity=24.1071428571429, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281364280, Length=347, Percent_Identity=24.207492795389, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 53415; Mature: 53415

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWDLIVLVFYFLVVFYFGFHFAKKNQKEEDFYLAKKEIHWVFLLLSLVATETSSLTFLS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IPSLSYKGDFRFLEIAMGYIIGRTIVALYLLPSYFSGNTISVYEYVGNRFGKSPQKTLSF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCHHHHHHH
VFTISRLLGDGIRLYVSSLPIAFLLERMGFSISPELLGIIALTILSIVTIIYSVFGGFRA
HHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFTDVLQWIIYIFGGVFALVLILSQLGGTTLMDTLQKLDSIGKWKVFVFDYNQTGDNSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
FILFAILGGAFISIGSHGTDLMLVQRVIATKNLLSGQKILIGSGIVVFFQFLLFLCIGSL
EEHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
LYVFYDGKSIPADKVFSHFIISEVPSPFLGILVAAILASAMSTLSSTINSLSLTWARDWD
HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCC
MDKWFSPRVLSLFFGVLLFFASLIPYFLVETWEKGILEMGLTIFSYTLGPSVAVFFLAKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECC
KRDLPISGRVFSLFFILSILITLAMGIGWKLSFTLLVPIGFVTLYGLVTIARLIKKI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIWDLIVLVFYFLVVFYFGFHFAKKNQKEEDFYLAKKEIHWVFLLLSLVATETSSLTFLS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IPSLSYKGDFRFLEIAMGYIIGRTIVALYLLPSYFSGNTISVYEYVGNRFGKSPQKTLSF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCHHHHHHH
VFTISRLLGDGIRLYVSSLPIAFLLERMGFSISPELLGIIALTILSIVTIIYSVFGGFRA
HHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFTDVLQWIIYIFGGVFALVLILSQLGGTTLMDTLQKLDSIGKWKVFVFDYNQTGDNSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
FILFAILGGAFISIGSHGTDLMLVQRVIATKNLLSGQKILIGSGIVVFFQFLLFLCIGSL
EEHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
LYVFYDGKSIPADKVFSHFIISEVPSPFLGILVAAILASAMSTLSSTINSLSLTWARDWD
HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCC
MDKWFSPRVLSLFFGVLLFFASLIPYFLVETWEKGILEMGLTIFSYTLGPSVAVFFLAKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECC
KRDLPISGRVFSLFFILSILITLAMGIGWKLSFTLLVPIGFVTLYGLVTIARLIKKI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]