| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220506
Identifier: 183220506
GI number: 183220506
Start: 1152406
End: 1154154
Strand: Reverse
Name: 183220506
Synonym: LEPBI_I1107
Alternate gene names: NA
Gene position: 1154154-1152406 (Counterclockwise)
Preceding gene: 183220507
Following gene: 183220505
Centisome position: 32.06
GC content: 40.25
Gene sequence:
>1749_bases ATGGCAGAGACTCTTATCAAACAAGCACGTATCTTTGATGGCAGCACAAATCCATCATTCATTGGGGATGTGCGGATTAA AAACGGAATCGTAGATACGATTTCAAAGACTGAATTGATTCCAAACCCAGGGGAAACAGTCATTGATGCAAAAGGCCAAT GGCTTACTCCCGGTTTTATTGATTTCCACACTCATTATGATGCTGAAATTGAAGTGGCTCCGGATCTTTCGGAATCGGTA AGGCATGGCGTCACAACCATTTCTCTAGGGAGCTGTTCGCTTAGCTTGGCGTTAGGTGATCCAACTGATCTTGCCGATAT GTTTAGCCGTGTTGAAGCCATACCTAGAAAAAACGTATTATCCATTTTAGAGAGTAAAAAAAACTGGAACTCTGCCGTTG ATTATAAAAAACACTTAAACTCTCTTCCGCTTGGTCCCAATGTCACCTCCTTTGCAGGTCACTCCGCAATTCGAGCTCAT GTGATGGGACTGGAACGATCTTTAACCAAAGGAGAAAAACCAACCAAACAAGAGTTAAACCAAATGAACCAACACCTGGA AGAAGCATTGGATGCCGGTTTTATGGGACTTTCTATCAATACATTGGTTTGGGATAAAATGGATGGATCTCGGTTTCGAT CAAGGCCTCTTCCCTCTACTTTTGCCAATTGGAGTGAATATCAATTTTTAAATCGAACTCTTAGGAAACGCGGAAAAATT TTCCAAGGTGTTCCAAATGTTTCGACTAAAATCAATGTTTTAATGTTTCTAAAGGAAGCATTTGGGATTTTTAGAAAACC ATTGAAGACAACCATTATATCATTAATGGATGTTAAATTTGATCCAGGATTGTATAAACTTTTGGGAGTGATCGGTCGTA TCACCAATACTATTTTTAGATCTGATTTCAGGTTCCAAGCCCTGCCTGAACCATTTGATTTGTATGCAGATGGTATGGAC GTGGTTGTGTTTGAAGAATTTGCTGCAGGTGCCAAAGCAAATCACATTGAAGACGAATTGGAACGTAAACAATTGATGAA AGATCCAAAGTATCGCTCTTGGTTCAAAAGGCAATGGACAAATTGGTTCCTCCCACGAGTGTTCCATAGAAATTTTAGAG AAACAAAAATTGTGGATGCTCCTGATAAATCACTCATCGGCAAATCGATCGATGAAGTAGCTAAAGAGAGAGGAGTCCAC TCAGTCACTGCCTTTTTGGATTTGGTGGCAGAACATGGAAACGATGTTAGATGGTATACTGTGATGGCAAACCATAGAAA GGAACCATTACAAAAAATAGTTTCTTACCCAGATATCCTCATCGGATTTTCGGATGCAGGTGCCCATTTACGAGGAATGG CACATTATAACTTTCCTCTTCGTATGTTAAAACTTGTTCGCGATGCTGAACTTGAAAACAAACCATTTATGACTATGGAA AAAGCAGTCCATAGGCTCACAGGCGAAATTGGGGATTGGTTTGGCATCGATGCAGGTTATATTAAAGAAGGAAAACGTGC TGATCTTGTTCTCATTGATCCAAACAAACTAGATGAATCTCTTGCAAAGGACGTGGAAGCTCCTATGCCTTTTATGGAGG ACTTCAAACGTTGGGTTCGTCGAAATGATGACACCATCAAAAAAGTATTCATCAACGGGAAATTGGCTGTGGATGGAGGA AAACCTGTTTCAAATTTGGGTAAAGAATCCGGTTATGGCCGCTTTTTAGAATCTCAAATCGGAGTCTAA
Upstream 100 bases:
>100_bases AGAAGGCTTTTGTCCAGAGAAACTTAAGGCAAATGATCGGGAATCGTTGACAAATCTTTGTCAATCTGCCATAATTTCGT TTGGTTTTTCTGGAGGTATC
Downstream 100 bases:
>100_bases AAAAGGTTTGAAGTTGGGTACGGTTTCGAATAGATTCAGTATCCAACCAAACCATGAAGACAAAGTCAATTTTTTTCATT CCACCTTTCCTCATCACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MAETLIKQARIFDGSTNPSFIGDVRIKNGIVDTISKTELIPNPGETVIDAKGQWLTPGFIDFHTHYDAEIEVAPDLSESV RHGVTTISLGSCSLSLALGDPTDLADMFSRVEAIPRKNVLSILESKKNWNSAVDYKKHLNSLPLGPNVTSFAGHSAIRAH VMGLERSLTKGEKPTKQELNQMNQHLEEALDAGFMGLSINTLVWDKMDGSRFRSRPLPSTFANWSEYQFLNRTLRKRGKI FQGVPNVSTKINVLMFLKEAFGIFRKPLKTTIISLMDVKFDPGLYKLLGVIGRITNTIFRSDFRFQALPEPFDLYADGMD VVVFEEFAAGAKANHIEDELERKQLMKDPKYRSWFKRQWTNWFLPRVFHRNFRETKIVDAPDKSLIGKSIDEVAKERGVH SVTAFLDLVAEHGNDVRWYTVMANHRKEPLQKIVSYPDILIGFSDAGAHLRGMAHYNFPLRMLKLVRDAELENKPFMTME KAVHRLTGEIGDWFGIDAGYIKEGKRADLVLIDPNKLDESLAKDVEAPMPFMEDFKRWVRRNDDTIKKVFINGKLAVDGG KPVSNLGKESGYGRFLESQIGV
Sequences:
>Translated_582_residues MAETLIKQARIFDGSTNPSFIGDVRIKNGIVDTISKTELIPNPGETVIDAKGQWLTPGFIDFHTHYDAEIEVAPDLSESV RHGVTTISLGSCSLSLALGDPTDLADMFSRVEAIPRKNVLSILESKKNWNSAVDYKKHLNSLPLGPNVTSFAGHSAIRAH VMGLERSLTKGEKPTKQELNQMNQHLEEALDAGFMGLSINTLVWDKMDGSRFRSRPLPSTFANWSEYQFLNRTLRKRGKI FQGVPNVSTKINVLMFLKEAFGIFRKPLKTTIISLMDVKFDPGLYKLLGVIGRITNTIFRSDFRFQALPEPFDLYADGMD VVVFEEFAAGAKANHIEDELERKQLMKDPKYRSWFKRQWTNWFLPRVFHRNFRETKIVDAPDKSLIGKSIDEVAKERGVH SVTAFLDLVAEHGNDVRWYTVMANHRKEPLQKIVSYPDILIGFSDAGAHLRGMAHYNFPLRMLKLVRDAELENKPFMTME KAVHRLTGEIGDWFGIDAGYIKEGKRADLVLIDPNKLDESLAKDVEAPMPFMEDFKRWVRRNDDTIKKVFINGKLAVDGG KPVSNLGKESGYGRFLESQIGV >Mature_581_residues AETLIKQARIFDGSTNPSFIGDVRIKNGIVDTISKTELIPNPGETVIDAKGQWLTPGFIDFHTHYDAEIEVAPDLSESVR HGVTTISLGSCSLSLALGDPTDLADMFSRVEAIPRKNVLSILESKKNWNSAVDYKKHLNSLPLGPNVTSFAGHSAIRAHV MGLERSLTKGEKPTKQELNQMNQHLEEALDAGFMGLSINTLVWDKMDGSRFRSRPLPSTFANWSEYQFLNRTLRKRGKIF QGVPNVSTKINVLMFLKEAFGIFRKPLKTTIISLMDVKFDPGLYKLLGVIGRITNTIFRSDFRFQALPEPFDLYADGMDV VVFEEFAAGAKANHIEDELERKQLMKDPKYRSWFKRQWTNWFLPRVFHRNFRETKIVDAPDKSLIGKSIDEVAKERGVHS VTAFLDLVAEHGNDVRWYTVMANHRKEPLQKIVSYPDILIGFSDAGAHLRGMAHYNFPLRMLKLVRDAELENKPFMTMEK AVHRLTGEIGDWFGIDAGYIKEGKRADLVLIDPNKLDESLAKDVEAPMPFMEDFKRWVRRNDDTIKKVFINGKLAVDGGK PVSNLGKESGYGRFLESQIGV
Specific function: Unknown
COG id: COG3653
COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 65863; Mature: 65732
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETLIKQARIFDGSTNPSFIGDVRIKNGIVDTISKTELIPNPGETVIDAKGQWLTPGFI CHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCEE DFHTHYDAEIEVAPDLSESVRHGVTTISLGSCSLSLALGDPTDLADMFSRVEAIPRKNVL EEECCCCCEEEECCCHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCHHHHH SILESKKNWNSAVDYKKHLNSLPLGPNVTSFAGHSAIRAHVMGLERSLTKGEKPTKQELN HHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHH QMNQHLEEALDAGFMGLSINTLVWDKMDGSRFRSRPLPSTFANWSEYQFLNRTLRKRGKI HHHHHHHHHHHCCCCCEEEHHEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHCCCH FQGVPNVSTKINVLMFLKEAFGIFRKPLKTTIISLMDVKFDPGLYKLLGVIGRITNTIFR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SDFRFQALPEPFDLYADGMDVVVFEEFAAGAKANHIEDELERKQLMKDPKYRSWFKRQWT CCCCCCCCCCCHHHHCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH NWFLPRVFHRNFRETKIVDAPDKSLIGKSIDEVAKERGVHSVTAFLDLVAEHGNDVRWYT HHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEE VMANHRKEPLQKIVSYPDILIGFSDAGAHLRGMAHYNFPLRMLKLVRDAELENKPFMTME EECCCCHHHHHHHHCCCCEEEEECCCCCHHCCCEECCCHHHHHHHHHHHCCCCCCCHHHH KAVHRLTGEIGDWFGIDAGYIKEGKRADLVLIDPNKLDESLAKDVEAPMPFMEDFKRWVR HHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHH RNDDTIKKVFINGKLAVDGGKPVSNLGKESGYGRFLESQIGV CCCCCEEEEEECCEEEECCCCCHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure AETLIKQARIFDGSTNPSFIGDVRIKNGIVDTISKTELIPNPGETVIDAKGQWLTPGFI HHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCEE DFHTHYDAEIEVAPDLSESVRHGVTTISLGSCSLSLALGDPTDLADMFSRVEAIPRKNVL EEECCCCCEEEECCCHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCHHHHH SILESKKNWNSAVDYKKHLNSLPLGPNVTSFAGHSAIRAHVMGLERSLTKGEKPTKQELN HHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHH QMNQHLEEALDAGFMGLSINTLVWDKMDGSRFRSRPLPSTFANWSEYQFLNRTLRKRGKI HHHHHHHHHHHCCCCCEEEHHEEEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHCCCH FQGVPNVSTKINVLMFLKEAFGIFRKPLKTTIISLMDVKFDPGLYKLLGVIGRITNTIFR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SDFRFQALPEPFDLYADGMDVVVFEEFAAGAKANHIEDELERKQLMKDPKYRSWFKRQWT CCCCCCCCCCCHHHHCCCCCEEEEHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH NWFLPRVFHRNFRETKIVDAPDKSLIGKSIDEVAKERGVHSVTAFLDLVAEHGNDVRWYT HHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEE VMANHRKEPLQKIVSYPDILIGFSDAGAHLRGMAHYNFPLRMLKLVRDAELENKPFMTME EECCCCHHHHHHHHCCCCEEEEECCCCCHHCCCEECCCHHHHHHHHHHHCCCCCCCHHHH KAVHRLTGEIGDWFGIDAGYIKEGKRADLVLIDPNKLDESLAKDVEAPMPFMEDFKRWVR HHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHH RNDDTIKKVFINGKLAVDGGKPVSNLGKESGYGRFLESQIGV CCCCCEEEEEECCEEEECCCCCHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]