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The map label for this gene is ydfG [C]

Identifier: 183220471

GI number: 183220471

Start: 1109051

End: 1109788

Strand: Reverse

Name: ydfG [C]

Synonym: LEPBI_I1068

Alternate gene names: 183220471

Gene position: 1109788-1109051 (Counterclockwise)

Preceding gene: 183220472

Following gene: 183220465

Centisome position: 30.83

GC content: 39.7

Gene sequence:

>738_bases
TTGATGGAACATTCATTAGTTGTGGGAGCAACTTCGGATATCGGAATTTGGGTAGTGGATGCATTGGCAAAACGAGGACA
TTCCCTTTCCTTAACTGGTAGAAACAAACAAAAGTTATCCGAATTACAAACCAAAATCATTTCAAAGTACAATGTTGTCG
TGAATATCTTTGAATTGGATATTACAGAAATGCATTCGTTTGATTCGTTTGTAACATCGCTGAATGGTATTCCCAATCAT
ATATTTTTCCTAGTTGGTTATTATGAAGACCAGAAGAGAGCCAGGGAAAACTGGAGAGAATTAGAAAAAACCATTCAAAT
CAACTTCACGGGCGTTGCTGCTTTATTAAATATATTCTCCCTTCAAATGGAAATGAGAAAATCTGGAACCATAACCGTTG
TCAGTTCTGTGGCAGGAGAAAGGGGAAGGAAATTGAATTATGTTTATGGAAGTGCGAAGGCTTGTTTGACCACCTATCTC
TCCGGATTACGTGCCTTAGTGTATCCGAATGGTGTTCATATAGGGACGATCCTACTCGGTCCAGTCTACACCAAGATGTC
TCTTGGTCATAATTTGATTCCTTGGTTGACATTACAACCAGAGGAAGCGGGGGAAAAAATTGTAACAGCCGGTCTTGGGA
GAAAAGACCAAGTATACATACGTTGGCCTTGGTATTTTATCATGTTTGGGATTCGAATGATTCCGGAATGGATCTTCAAA
CGCCTCCCAACATTCTAA

Upstream 100 bases:

>100_bases
AATTGTCTTTCCTCTGGAATGGATGATTTTATGACCAAACCACTGCTCATGCAGGATTTGGTTTATATGATTAAAAAATG
GTCAAAAGGATTCGATTGAA

Downstream 100 bases:

>100_bases
CTTTACGAACCTAGATTAAGTTTAAGGATAACTGATGTAATTCCAAATGGTTTGGAAACCATTGGTCATGGGACAACTAT
GCAAAACGGCAGCGCCCATA

Product: putative short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MMEHSLVVGATSDIGIWVVDALAKRGHSLSLTGRNKQKLSELQTKIISKYNVVVNIFELDITEMHSFDSFVTSLNGIPNH
IFFLVGYYEDQKRARENWRELEKTIQINFTGVAALLNIFSLQMEMRKSGTITVVSSVAGERGRKLNYVYGSAKACLTTYL
SGLRALVYPNGVHIGTILLGPVYTKMSLGHNLIPWLTLQPEEAGEKIVTAGLGRKDQVYIRWPWYFIMFGIRMIPEWIFK
RLPTF

Sequences:

>Translated_245_residues
MMEHSLVVGATSDIGIWVVDALAKRGHSLSLTGRNKQKLSELQTKIISKYNVVVNIFELDITEMHSFDSFVTSLNGIPNH
IFFLVGYYEDQKRARENWRELEKTIQINFTGVAALLNIFSLQMEMRKSGTITVVSSVAGERGRKLNYVYGSAKACLTTYL
SGLRALVYPNGVHIGTILLGPVYTKMSLGHNLIPWLTLQPEEAGEKIVTAGLGRKDQVYIRWPWYFIMFGIRMIPEWIFK
RLPTF
>Mature_245_residues
MMEHSLVVGATSDIGIWVVDALAKRGHSLSLTGRNKQKLSELQTKIISKYNVVVNIFELDITEMHSFDSFVTSLNGIPNH
IFFLVGYYEDQKRARENWRELEKTIQINFTGVAALLNIFSLQMEMRKSGTITVVSSVAGERGRKLNYVYGSAKACLTTYL
SGLRALVYPNGVHIGTILLGPVYTKMSLGHNLIPWLTLQPEEAGEKIVTAGLGRKDQVYIRWPWYFIMFGIRMIPEWIFK
RLPTF

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27821; Mature: 27821

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEHSLVVGATSDIGIWVVDALAKRGHSLSLTGRNKQKLSELQTKIISKYNVVVNIFELD
CCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHEEEEEEEEEC
ITEMHSFDSFVTSLNGIPNHIFFLVGYYEDQKRARENWRELEKTIQINFTGVAALLNIFS
HHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHH
LQMEMRKSGTITVVSSVAGERGRKLNYVYGSAKACLTTYLSGLRALVYPNGVHIGTILLG
HHHHHHCCCCEEEEEHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEHEEHH
PVYTKMSLGHNLIPWLTLQPEEAGEKIVTAGLGRKDQVYIRWPWYFIMFGIRMIPEWIFK
HHHHHHHCCCCCCCEEEECCHHHCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
RLPTF
HCCCC
>Mature Secondary Structure
MMEHSLVVGATSDIGIWVVDALAKRGHSLSLTGRNKQKLSELQTKIISKYNVVVNIFELD
CCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHEEEEEEEEEC
ITEMHSFDSFVTSLNGIPNHIFFLVGYYEDQKRARENWRELEKTIQINFTGVAALLNIFS
HHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHH
LQMEMRKSGTITVVSSVAGERGRKLNYVYGSAKACLTTYLSGLRALVYPNGVHIGTILLG
HHHHHHCCCCEEEEEHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEHEEHH
PVYTKMSLGHNLIPWLTLQPEEAGEKIVTAGLGRKDQVYIRWPWYFIMFGIRMIPEWIFK
HHHHHHHCCCCCCCEEEECCHHHCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHH
RLPTF
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]